RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 NAIPQ13075 1403 aa10.74□□□□□ -0.69
RFX3-205ENST00000420720 RGPD1P0DJD0 1748 aa10.73□□□□□ -0.69
RFX3-205ENST00000420720 TNS1Q9HBL0 1735 aaKnown RBP10.73□□□□□ -0.69
RFX3-205ENST00000420720 KRT27Q7Z3Y8 459 aa10.73□□□□□ -0.69
RFX3-205ENST00000420720 DISP2A7MBM2 1401 aa10.73□□□□□ -0.69
RFX3-205ENST00000420720 RRBP1Q9P2E9 1410 aaKnown RBP10.73□□□□□ -0.69
RFX3-205ENST00000420720 NRXN3Q9Y4C0 1643 aa10.73□□□□□ -0.69
RFX3-205ENST00000420720 XRN1Q8IZH2 1706 aaKnown RBP10.72□□□□□ -0.69
RFX3-205ENST00000420720 EZH2Q15910 746 aaKnown RBP10.72□□□□□ -0.69
RFX3-205ENST00000420720 UNC5CLQ8IV45 518 aa10.72□□□□□ -0.69
RFX3-205ENST00000420720 OTUD5Q96G74 571 aa10.72□□□□□ -0.69
RFX3-205ENST00000420720 PLSCR2Q9NRY7 297 aa10.72□□□□□ -0.69
RFX3-205ENST00000420720 VGFO15240 615 aaPredicted RBP10.71□□□□□ -0.69
RFX3-205ENST00000420720 ONECUT3O60422 494 aaPredicted RBP10.71□□□□□ -0.69
RFX3-205ENST00000420720 SLC34A2O95436 690 aa10.71□□□□□ -0.69
RFX3-205ENST00000420720 NEXMIFQ5QGS0 1516 aa10.71□□□□□ -0.69
RFX3-205ENST00000420720 C1orf167Q5SNV9 1468 aa10.71□□□□□ -0.69
RFX3-205ENST00000420720 NALCNQ8IZF0 1738 aa10.71□□□□□ -0.69
RFX3-205ENST00000420720 CLTCL1P53675 1640 aa10.7□□□□□ -0.7
RFX3-205ENST00000420720 ADGRL3Q9HAR2 1447 aa10.7□□□□□ -0.7
RFX3-205ENST00000420720 RPGRIP1LQ68CZ1 1315 aa10.69□□□□□ -0.7
RFX3-205ENST00000420720 ORAI2Q96SN7 254 aa10.69□□□□□ -0.7
RFX3-205ENST00000420720 PPP1R1BQ9UD71 204 aaPredicted RBP10.69□□□□□ -0.7
RFX3-205ENST00000420720 METRNQ9UJH8 293 aa10.69□□□□□ -0.7
RFX3-205ENST00000420720 ROBO2Q9HCK4 1378 aa10.68□□□□□ -0.7
RFX3-205ENST00000420720 MAP3K13O43283 966 aa10.68□□□□□ -0.7
RFX3-205ENST00000420720 NUBP1P53384 320 aa10.68□□□□□ -0.7
RFX3-205ENST00000420720 PLCD3Q8N3E9 789 aa10.68□□□□□ -0.7
RFX3-205ENST00000420720 CAMKK2Q96RR4 588 aa10.68□□□□□ -0.7
RFX3-205ENST00000420720 GIGYF1O75420 1035 aaPredicted RBP10.67□□□□□ -0.7
RFX3-205ENST00000420720 POTEJP0CG39 1038 aa10.67□□□□□ -0.7
RFX3-205ENST00000420720 ATN1P54259 1190 aaPredicted RBP10.67□□□□□ -0.7
RFX3-205ENST00000420720 NUP188Q5SRE5 1749 aa10.67□□□□□ -0.7
RFX3-205ENST00000420720 HFM1A2PYH4 1435 aa10.67□□□□□ -0.7
RFX3-205ENST00000420720 RREB1Q92766 1687 aa10.66□□□□□ -0.7
RFX3-205ENST00000420720 CHD4Q14839 1912 aa10.66□□□□□ -0.7
RFX3-205ENST00000420720 PLEKHG5O94827 1062 aa10.66□□□□□ -0.7
RFX3-205ENST00000420720 FAM182BQ5T319 152 aa10.66□□□□□ -0.7
RFX3-205ENST00000420720 SPON1Q9HCB6 807 aa10.66□□□□□ -0.7
RFX3-205ENST00000420720 BMP2KQ9NSY1 1161 aaPredicted RBP10.66□□□□□ -0.7
RFX3-205ENST00000420720 KCNQ2O43526 872 aa10.65□□□□□ -0.7
RFX3-205ENST00000420720 RGL3Q3MIN7 710 aa10.65□□□□□ -0.7
RFX3-205ENST00000420720 NRKQ7Z2Y5 1582 aa10.65□□□□□ -0.71
RFX3-205ENST00000420720 ADGRF5Q8IZF2 1346 aa10.64□□□□□ -0.71
RFX3-205ENST00000420720 PXDNQ92626 1479 aa10.64□□□□□ -0.71
RFX3-205ENST00000420720 VPS72Q15906 364 aa10.64□□□□□ -0.71
RFX3-205ENST00000420720 ESCO1Q5FWF5 840 aa10.63□□□□□ -0.71
RFX3-205ENST00000420720 STK26Q9P289 416 aa10.63□□□□□ -0.71
RFX3-205ENST00000420720 USP32Q8NFA0 1604 aa10.62□□□□□ -0.71
RFX3-205ENST00000420720 NUTM2FA1L443 756 aa10.62□□□□□ -0.71
RFX3-205ENST00000420720 POTEFA5A3E0 1075 aa10.62□□□□□ -0.71
RFX3-205ENST00000420720 WAPLQ7Z5K2 1190 aa10.62□□□□□ -0.71
RFX3-205ENST00000420720 SLC39A7Q92504 469 aa10.62□□□□□ -0.71
RFX3-205ENST00000420720 MPHOSPH9Q99550 1183 aa10.62□□□□□ -0.71
RFX3-205ENST00000420720 PLCH1Q4KWH8 1693 aa10.62□□□□□ -0.71
RFX3-205ENST00000420720 ADGRB2O60241 1585 aa10.61□□□□□ -0.71
RFX3-205ENST00000420720 MYOM1P52179 1685 aa10.61□□□□□ -0.71
RFX3-205ENST00000420720 TMEM132EQ6IEE7 984 aa10.61□□□□□ -0.71
RFX3-205ENST00000420720 KIF1BO60333 1816 aa10.61□□□□□ -0.71
RFX3-205ENST00000420720 CCDC144AA2RUR9 1427 aa10.6□□□□□ -0.71
RFX3-205ENST00000420720 PRAG1Q86YV5 1406 aa10.6□□□□□ -0.71
RFX3-205ENST00000420720 XPCQ01831 940 aaPredicted RBP10.6□□□□□ -0.71
RFX3-205ENST00000420720 SHANK3Q9BYB0 1731 aa10.6□□□□□ -0.71
RFX3-205ENST00000420720 NPHP3Q7Z494 1330 aa10.59□□□□□ -0.71
RFX3-205ENST00000420720 NWD2Q9ULI1 1742 aa10.59□□□□□ -0.71
RFX3-205ENST00000420720 FOXO3O43524 673 aa10.59□□□□□ -0.71
RFX3-205ENST00000420720 C7P10643 843 aa10.59□□□□□ -0.71
RFX3-205ENST00000420720 PARD3Q8TEW0 1356 aa10.59□□□□□ -0.71
RFX3-205ENST00000420720 GOLGB1Q14789 3259 aaKnown RBP10.58□□□□□ -0.72
RFX3-205ENST00000420720 LRPPRCP42704 1394 aaKnown RBP10.58□□□□□ -0.72
RFX3-205ENST00000420720 PLEKHH1Q9ULM0 1364 aa10.58□□□□□ -0.72
RFX3-205ENST00000420720 A0A0G2JS52 829 aa10.58□□□□□ -0.72
RFX3-205ENST00000420720 MYT1Q01538 1121 aa10.58□□□□□ -0.72
RFX3-205ENST00000420720 FAM98CQ17RN3 349 aaKnown RBP10.58□□□□□ -0.72
RFX3-205ENST00000420720 CCDC9Q9Y3X0 531 aaKnown RBP10.58□□□□□ -0.72
RFX3-205ENST00000420720 CASZ1Q86V15 1759 aa10.57□□□□□ -0.72
RFX3-205ENST00000420720 ANKRD30BQ9BXX2 1392 aa10.57□□□□□ -0.72
RFX3-205ENST00000420720 TIE1P35590 1138 aa10.57□□□□□ -0.72
RFX3-205ENST00000420720 SPATA31E1Q6ZUB1 1445 aa10.57□□□□□ -0.72
RFX3-205ENST00000420720 NRAPQ86VF7 1730 aa10.56□□□□□ -0.72
RFX3-205ENST00000420720 ABCC11Q96J66 1382 aa10.56□□□□□ -0.72
RFX3-205ENST00000420720 TTLL13PA6NNM8 815 aa10.56□□□□□ -0.72
RFX3-205ENST00000420720 TRIM37O94972 964 aa10.56□□□□□ -0.72
RFX3-205ENST00000420720 THSD7AQ9UPZ6 1657 aa10.56□□□□□ -0.72
RFX3-205ENST00000420720 APBA3O96018 575 aa10.55□□□□□ -0.72
RFX3-205ENST00000420720 ZBTB47Q9UFB7 747 aaPredicted RBP10.55□□□□□ -0.72
RFX3-205ENST00000420720 TECPR2O15040 1411 aa10.55□□□□□ -0.72
RFX3-205ENST00000420720 PPLO60437 1756 aa10.54□□□□□ -0.72
RFX3-205ENST00000420720 PTGER2P43116 358 aa10.54□□□□□ -0.72
RFX3-205ENST00000420720 NBPF8Q3BBV2 869 aa10.54□□□□□ -0.72
RFX3-205ENST00000420720 CFAP70Q5T0N1 1121 aa10.54□□□□□ -0.72
RFX3-205ENST00000420720 COL13A1Q5TAT6 717 aaPredicted RBP10.54□□□□□ -0.72
RFX3-205ENST00000420720 NBPF14Q5TI25 921 aa10.54□□□□□ -0.72
RFX3-205ENST00000420720 CDC42BPGQ6DT37 1551 aa10.54□□□□□ -0.72
RFX3-205ENST00000420720 KRT28Q7Z3Y7 464 aa10.54□□□□□ -0.72
RFX3-205ENST00000420720 SYT17Q9BSW7 474 aa10.54□□□□□ -0.72
RFX3-205ENST00000420720 PDGFDQ9GZP0 370 aaPredicted RBP10.54□□□□□ -0.72
RFX3-205ENST00000420720 C14orf93Q9H972 538 aaKnown RBP10.54□□□□□ -0.72
RFX3-205ENST00000420720 PCDHB13Q9Y5F0 798 aa10.54□□□□□ -0.72
RFX3-205ENST00000420720 PIK3C2GO75747 1445 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms