RNA–Protein interactions for RNA: ENST00000420522.1

LINC01646-201, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 3 BASIC

Gene LINC01646, Length 682 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-201ENST00000420522 PCDH10Q9P2E7 1040 aa8.17□□□□□ -1.1
LINC01646-201ENST00000420522 CTHP32929 405 aa8.16□□□□□ -1.1
LINC01646-201ENST00000420522 KCNH2Q12809 1159 aa8.16□□□□□ -1.1
LINC01646-201ENST00000420522 SLC6A16Q9GZN6 736 aa8.16□□□□□ -1.1
LINC01646-201ENST00000420522 ZC3H4Q9UPT8 1303 aaKnown RBP8.16□□□□□ -1.1
LINC01646-201ENST00000420522 HDGFL1Q5TGJ6 251 aa8.15□□□□□ -1.1
LINC01646-201ENST00000420522 ADAMTS19Q8TE59 1207 aa8.15□□□□□ -1.1
LINC01646-201ENST00000420522 ALG2Q9H553 416 aa8.14□□□□□ -1.11
LINC01646-201ENST00000420522 HCSTQ9UBK5 93 aa8.14□□□□□ -1.11
LINC01646-201ENST00000420522 SOX11P35716 441 aa8.13□□□□□ -1.11
LINC01646-201ENST00000420522 SPNS2Q8IVW8 549 aa8.13□□□□□ -1.11
LINC01646-201ENST00000420522 ARMC2Q8NEN0 867 aa8.13□□□□□ -1.11
LINC01646-201ENST00000420522 NKX2-3Q8TAU0 364 aa8.13□□□□□ -1.11
LINC01646-201ENST00000420522 FBXO45P0C2W1 286 aa8.12□□□□□ -1.11
LINC01646-201ENST00000420522 NR1H3Q13133 447 aa8.12□□□□□ -1.11
LINC01646-201ENST00000420522 RNF166Q96A37 237 aaPredicted RBP8.12□□□□□ -1.11
LINC01646-201ENST00000420522 ZBBXA8MT70 800 aa8.11□□□□□ -1.11
LINC01646-201ENST00000420522 S1PR4O95977 384 aa8.11□□□□□ -1.11
LINC01646-201ENST00000420522 PTCRAQ6ISU1 281 aaPredicted RBP8.11□□□□□ -1.11
LINC01646-201ENST00000420522 GPKOWQ92917 476 aaPredicted RBP eCLIP8.11□□□□□ -1.11
LINC01646-201ENST00000420522 GPSM3Q9Y4H4 160 aa8.11□□□□□ -1.11
LINC01646-201ENST00000420522 ITGBL1O95965 494 aaPredicted RBP8.1□□□□□ -1.11
LINC01646-201ENST00000420522 EIF4G2P78344 907 aaKnown RBP eCLIP8.1□□□□□ -1.11
LINC01646-201ENST00000420522 PDXDC2PQ6P474 469 aa8.1□□□□□ -1.11
LINC01646-201ENST00000420522 CCDC24Q8N4L8 307 aa8.1□□□□□ -1.11
LINC01646-201ENST00000420522 UNC93B1Q9H1C4 597 aa8.1□□□□□ -1.11
LINC01646-201ENST00000420522 SEMA3FQ13275 785 aa8.09□□□□□ -1.11
LINC01646-201ENST00000420522 NBPF14Q5TI25 921 aa8.09□□□□□ -1.11
LINC01646-201ENST00000420522 KCNC4Q03721 635 aa8.08□□□□□ -1.12
LINC01646-201ENST00000420522 PTK2Q05397 1052 aa8.08□□□□□ -1.12
LINC01646-201ENST00000420522 OCSTAMPQ9BR26 566 aa8.07□□□□□ -1.12
LINC01646-201ENST00000420522 FCF1Q9Y324 198 aaKnown RBP8.07□□□□□ -1.12
LINC01646-201ENST00000420522 SH3BP5LQ7L8J4 393 aa8.05□□□□□ -1.12
LINC01646-201ENST00000420522 UCN2Q96RP3 112 aa8.05□□□□□ -1.12
LINC01646-201ENST00000420522 PPP1R12CQ9BZL4 782 aa8.05□□□□□ -1.12
LINC01646-201ENST00000420522 CFAP70Q5T0N1 1121 aa8.04□□□□□ -1.12
LINC01646-201ENST00000420522 PALM3A6NDB9 673 aaPredicted RBP8.03□□□□□ -1.12
LINC01646-201ENST00000420522 RNF223E7ERA6 249 aa8.03□□□□□ -1.12
LINC01646-201ENST00000420522 PPEF1O14829 653 aaPredicted RBP8.03□□□□□ -1.12
LINC01646-201ENST00000420522 MCCD1P59942 119 aaPredicted RBP8.03□□□□□ -1.12
LINC01646-201ENST00000420522 BAP1Q92560 729 aa8.03□□□□□ -1.12
LINC01646-201ENST00000420522 ARHGAP9Q9BRR9 750 aa8.03□□□□□ -1.12
LINC01646-201ENST00000420522 PPP1R15AO75807 674 aaPredicted RBP8.02□□□□□ -1.13
LINC01646-201ENST00000420522 SH3RF1Q7Z6J0 888 aa8.02□□□□□ -1.13
LINC01646-201ENST00000420522 ANKLE1Q8NAG6 615 aa8.02□□□□□ -1.13
LINC01646-201ENST00000420522 ADAM32Q8TC27 787 aa8.02□□□□□ -1.13
LINC01646-201ENST00000420522 ZNF592Q92610 1267 aa8.02□□□□□ -1.13
LINC01646-201ENST00000420522 TFIP11Q9UBB9 837 aaKnown RBP8.02□□□□□ -1.13
LINC01646-201ENST00000420522 GGCXP38435 758 aa8.01□□□□□ -1.13
LINC01646-201ENST00000420522 ZBTB33Q86T24 672 aa8.01□□□□□ -1.13
LINC01646-201ENST00000420522 ZNF511Q8NB15 262 aa8.01□□□□□ -1.13
LINC01646-201ENST00000420522 SRPK2P78362 688 aaKnown RBP8□□□□□ -1.13
LINC01646-201ENST00000420522 LINC01559Q495D7 138 aa8□□□□□ -1.13
LINC01646-201ENST00000420522 TBC1D9Q6ZT07 1266 aa8□□□□□ -1.13
LINC01646-201ENST00000420522 BPHLQ86WA6 291 aaPredicted RBP8□□□□□ -1.13
LINC01646-201ENST00000420522 NFATC2IPQ8NCF5 419 aa8□□□□□ -1.13
LINC01646-201ENST00000420522 FOXJ1Q92949 421 aa8□□□□□ -1.13
LINC01646-201ENST00000420522 PBXIP1Q96AQ6 731 aa8□□□□□ -1.13
LINC01646-201ENST00000420522 CEP126Q9P2H0 1117 aa8□□□□□ -1.13
LINC01646-201ENST00000420522 PCDHB9Q9Y5E1 797 aa8□□□□□ -1.13
LINC01646-201ENST00000420522 MAFBQ9Y5Q3 323 aaPredicted RBP8□□□□□ -1.13
LINC01646-201ENST00000420522 ATP9BO43861 1147 aa7.99□□□□□ -1.13
LINC01646-201ENST00000420522 RFX1P22670 979 aa7.99□□□□□ -1.13
LINC01646-201ENST00000420522 LMOD1P29536 600 aaPredicted RBP7.99□□□□□ -1.13
LINC01646-201ENST00000420522 MMRN1Q13201 1228 aa7.99□□□□□ -1.13
LINC01646-201ENST00000420522 PLA2G2CQ5R387 149 aa7.99□□□□□ -1.13
LINC01646-201ENST00000420522 PPP1R18Q6NYC8 613 aa7.99□□□□□ -1.13
LINC01646-201ENST00000420522 MAGEB6P1A0A0J9YX57 407 aa7.98□□□□□ -1.13
LINC01646-201ENST00000420522 PIK3CDO00329 1044 aa7.98□□□□□ -1.13
LINC01646-201ENST00000420522 ZBTB24O43167 697 aaPredicted RBP7.98□□□□□ -1.13
LINC01646-201ENST00000420522 SH3BP2P78314 561 aa7.98□□□□□ -1.13
LINC01646-201ENST00000420522 C4orf48Q5BLP8 95 aa7.98□□□□□ -1.13
LINC01646-201ENST00000420522 CARD14Q9BXL6 1004 aa7.98□□□□□ -1.13
LINC01646-201ENST00000420522 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.98□□□□□ -1.13
LINC01646-201ENST00000420522 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.97□□□□□ -1.13
LINC01646-201ENST00000420522 TRIM32Q13049 653 aa7.97□□□□□ -1.13
LINC01646-201ENST00000420522 AGERQ15109 404 aa7.97□□□□□ -1.13
LINC01646-201ENST00000420522 ERFEQ4G0M1 354 aa7.97□□□□□ -1.13
LINC01646-201ENST00000420522 PHTF2Q8N3S3 785 aa7.97□□□□□ -1.13
LINC01646-201ENST00000420522 C1QTNF2Q9BXJ5 285 aa7.97□□□□□ -1.13
LINC01646-201ENST00000420522 ACIN1Q9UKV3 1341 aaKnown RBP7.97□□□□□ -1.13
LINC01646-201ENST00000420522 RPIAP49247 311 aa7.96□□□□□ -1.14
LINC01646-201ENST00000420522 IFFO2Q5TF58 517 aa7.96□□□□□ -1.14
LINC01646-201ENST00000420522 DZIP3Q86Y13 1208 aaKnown RBP7.96□□□□□ -1.14
LINC01646-201ENST00000420522 FAM174AQ8TBP5 190 aa7.96□□□□□ -1.14
LINC01646-201ENST00000420522 WNT7BP56706 349 aa7.95□□□□□ -1.14
LINC01646-201ENST00000420522 SLFNL1Q499Z3 407 aa7.95□□□□□ -1.14
LINC01646-201ENST00000420522 CHIC2Q9UKJ5 165 aa7.95□□□□□ -1.14
LINC01646-201ENST00000420522 SKIP12755 728 aa7.94□□□□□ -1.14
LINC01646-201ENST00000420522 PDIA4P13667 645 aaKnown RBP7.94□□□□□ -1.14
LINC01646-201ENST00000420522 SKOR1P84550 965 aa7.94□□□□□ -1.14
LINC01646-201ENST00000420522 RNF135Q8IUD6 432 aa7.94□□□□□ -1.14
LINC01646-201ENST00000420522 PLEKHM2Q8IWE5 1019 aa7.94□□□□□ -1.14
LINC01646-201ENST00000420522 TRMT44Q8IYL2 757 aaKnown RBP7.94□□□□□ -1.14
LINC01646-201ENST00000420522 RETREG2Q8NC44 543 aa7.94□□□□□ -1.14
LINC01646-201ENST00000420522 USP17L5A8MUK1 530 aa7.93□□□□□ -1.14
LINC01646-201ENST00000420522 KANK4Q5T7N3 995 aaPredicted RBP7.93□□□□□ -1.14
LINC01646-201ENST00000420522 SLC10A4Q96EP9 437 aa7.93□□□□□ -1.14
LINC01646-201ENST00000420522 USP17L3A6NCW0 530 aa7.92□□□□□ -1.14
LINC01646-201ENST00000420522 USP17L4A6NCW7 530 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms