RNA–Protein interactions for RNA: ENST00000419650.1

GACAT1-201, gastric cancer associated transcript 1, humanhuman

TSL 4 BASIC

Gene GACAT1, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT1-201ENST00000419650 USP21Q9UK80 565 aa12.18□□□□□ -0.46
GACAT1-201ENST00000419650 RALGAPBQ86X10 1494 aa12.18□□□□□ -0.46
GACAT1-201ENST00000419650 CDK12Q9NYV4 1490 aaPredicted RBP12.17□□□□□ -0.46
GACAT1-201ENST00000419650 POLR3AO14802 1390 aaPredicted RBP12.17□□□□□ -0.46
GACAT1-201ENST00000419650 BCL9LQ86UU0 1499 aa12.16□□□□□ -0.46
GACAT1-201ENST00000419650 PAK3O75914 559 aaPredicted RBP12.16□□□□□ -0.46
GACAT1-201ENST00000419650 FNBP4Q8N3X1 1017 aaPredicted RBP12.16□□□□□ -0.46
GACAT1-201ENST00000419650 CABP2Q9NPB3 220 aa12.16□□□□□ -0.46
GACAT1-201ENST00000419650 CCDC61Q9Y6R9 512 aa12.16□□□□□ -0.46
GACAT1-201ENST00000419650 RGS12O14924 1447 aa12.16□□□□□ -0.46
GACAT1-201ENST00000419650 ATRNO75882 1429 aa12.16□□□□□ -0.46
GACAT1-201ENST00000419650 PPIP5K1Q6PFW1 1433 aa12.16□□□□□ -0.46
GACAT1-201ENST00000419650 PHRF1Q9P1Y6 1649 aaKnown RBP12.15□□□□□ -0.46
GACAT1-201ENST00000419650 ACEP12821 1306 aa12.15□□□□□ -0.46
GACAT1-201ENST00000419650 NWD2Q9ULI1 1742 aa12.15□□□□□ -0.46
GACAT1-201ENST00000419650 RBM6P78332 1123 aaKnown RBP12.15□□□□□ -0.46
GACAT1-201ENST00000419650 RNF216Q9NWF9 866 aaPredicted RBP12.15□□□□□ -0.46
GACAT1-201ENST00000419650 SLIT2O94813 1529 aa12.15□□□□□ -0.46
GACAT1-201ENST00000419650 PLEKHG3A1L390 1219 aa12.14□□□□□ -0.47
GACAT1-201ENST00000419650 CARD11Q9BXL7 1154 aa12.14□□□□□ -0.47
GACAT1-201ENST00000419650 PCGF6Q9BYE7 350 aa12.14□□□□□ -0.47
GACAT1-201ENST00000419650 TRPC5Q9UL62 973 aaPredicted RBP12.14□□□□□ -0.47
GACAT1-201ENST00000419650 EVC2Q86UK5 1308 aa12.13□□□□□ -0.47
GACAT1-201ENST00000419650 NRAPQ86VF7 1730 aa12.13□□□□□ -0.47
GACAT1-201ENST00000419650 AKAP12Q02952 1782 aa12.13□□□□□ -0.47
GACAT1-201ENST00000419650 COL14A1Q05707 1796 aaKnown RBP12.13□□□□□ -0.47
GACAT1-201ENST00000419650 GLI3P10071 1580 aa12.12□□□□□ -0.47
GACAT1-201ENST00000419650 SBNO2Q9Y2G9 1366 aa12.11□□□□□ -0.47
GACAT1-201ENST00000419650 NUTM2GQ5VZR2 741 aa12.11□□□□□ -0.47
GACAT1-201ENST00000419650 UNC5CLQ8IV45 518 aa12.11□□□□□ -0.47
GACAT1-201ENST00000419650 NRKQ7Z2Y5 1582 aa12.1□□□□□ -0.47
GACAT1-201ENST00000419650 CABP1Q9NZU7 370 aa12.1□□□□□ -0.47
GACAT1-201ENST00000419650 USP6P35125 1406 aa12.1□□□□□ -0.47
GACAT1-201ENST00000419650 FAM83GA6ND36 823 aa12.09□□□□□ -0.47
GACAT1-201ENST00000419650 PIK3C2AO00443 1686 aa12.09□□□□□ -0.47
GACAT1-201ENST00000419650 ATAD2Q6PL18 1390 aa12.08□□□□□ -0.48
GACAT1-201ENST00000419650 C1QBPQ07021 282 aaKnown RBP12.08□□□□□ -0.48
GACAT1-201ENST00000419650 ABTB2Q8N961 1025 aa12.08□□□□□ -0.48
GACAT1-201ENST00000419650 GJD4Q96KN9 370 aaPredicted RBP12.08□□□□□ -0.48
GACAT1-201ENST00000419650 BRWD3Q6RI45 1802 aa12.08□□□□□ -0.48
GACAT1-201ENST00000419650 MON2Q7Z3U7 1717 aa12.08□□□□□ -0.48
GACAT1-201ENST00000419650 PRDM11Q9NQV5 511 aa12.07□□□□□ -0.48
GACAT1-201ENST00000419650 KIAA0232Q92628 1395 aa12.06□□□□□ -0.48
GACAT1-201ENST00000419650 VPS72Q15906 364 aa12.06□□□□□ -0.48
GACAT1-201ENST00000419650 BTG4Q9NY30 223 aa12.06□□□□□ -0.48
GACAT1-201ENST00000419650 USP19O94966 1318 aa12.06□□□□□ -0.48
GACAT1-201ENST00000419650 CLSPNQ9HAW4 1339 aa12.06□□□□□ -0.48
GACAT1-201ENST00000419650 BRD4O60885 1362 aaPredicted RBP12.05□□□□□ -0.48
GACAT1-201ENST00000419650 UPF1Q92900 1129 aaKnown RBP eCLIP12.05□□□□□ -0.48
GACAT1-201ENST00000419650 CCDC9Q9Y3X0 531 aaKnown RBP12.05□□□□□ -0.48
GACAT1-201ENST00000419650 CPSF1Q10570 1443 aaKnown RBP12.04□□□□□ -0.48
GACAT1-201ENST00000419650 SSH2Q76I76 1423 aa12.04□□□□□ -0.48
GACAT1-201ENST00000419650 LMO7Q8WWI1 1683 aa12.04□□□□□ -0.48
GACAT1-201ENST00000419650 ZC3H6P61129 1189 aaKnown RBP12.04□□□□□ -0.48
GACAT1-201ENST00000419650 CHRNA2Q15822 529 aa12.04□□□□□ -0.48
GACAT1-201ENST00000419650 NLRP13Q86W25 1043 aa12.04□□□□□ -0.48
GACAT1-201ENST00000419650 SLIT3O75094 1523 aa12.04□□□□□ -0.48
GACAT1-201ENST00000419650 CD163L1Q9NR16 1453 aa12.03□□□□□ -0.48
GACAT1-201ENST00000419650 ST20-MTHFSA0A0A6YYL1 179 aa12.03□□□□□ -0.48
GACAT1-201ENST00000419650 TESK2Q96S53 571 aa12.03□□□□□ -0.48
GACAT1-201ENST00000419650 KTN1Q86UP2 1357 aaKnown RBP12.03□□□□□ -0.48
GACAT1-201ENST00000419650 USP47Q96K76 1375 aa12.03□□□□□ -0.48
GACAT1-201ENST00000419650 NLRP6P59044 892 aa12.02□□□□□ -0.49
GACAT1-201ENST00000419650 CCER1Q8TC90 406 aaPredicted RBP12.02□□□□□ -0.49
GACAT1-201ENST00000419650 CPDO75976 1380 aa12.02□□□□□ -0.49
GACAT1-201ENST00000419650 CAMTA1Q9Y6Y1 1673 aa12.01□□□□□ -0.49
GACAT1-201ENST00000419650 TMC1Q8TDI8 760 aa12.01□□□□□ -0.49
GACAT1-201ENST00000419650 ZNF692Q9BU19 519 aaPredicted RBP12.01□□□□□ -0.49
GACAT1-201ENST00000419650 TIMELESSQ9UNS1 1208 aa12.01□□□□□ -0.49
GACAT1-201ENST00000419650 TTC21BQ7Z4L5 1316 aa12.01□□□□□ -0.49
GACAT1-201ENST00000419650 USP54Q70EL1 1684 aa12□□□□□ -0.49
GACAT1-201ENST00000419650 THSD7AQ9UPZ6 1657 aa12□□□□□ -0.49
GACAT1-201ENST00000419650 A0A0G2JS52 829 aa12□□□□□ -0.49
GACAT1-201ENST00000419650 GCP02774 474 aa12□□□□□ -0.49
GACAT1-201ENST00000419650 MYT1Q01538 1121 aa12□□□□□ -0.49
GACAT1-201ENST00000419650 SEPT12Q8IYM1 358 aa12□□□□□ -0.49
GACAT1-201ENST00000419650 STRN4Q9NRL3 753 aa12□□□□□ -0.49
GACAT1-201ENST00000419650 SPATA31A5Q5VU36 1347 aa12□□□□□ -0.49
GACAT1-201ENST00000419650 SPATA31A7Q8IWB4 1347 aa12□□□□□ -0.49
GACAT1-201ENST00000419650 TTC21AQ8NDW8 1320 aa12□□□□□ -0.49
GACAT1-201ENST00000419650 RGPD5Q99666 1765 aa12□□□□□ -0.49
GACAT1-201ENST00000419650 ZBTB7CA1YPR0 619 aa11.99□□□□□ -0.49
GACAT1-201ENST00000419650 FAM98CQ17RN3 349 aaKnown RBP11.99□□□□□ -0.49
GACAT1-201ENST00000419650 SLC12A5Q9H2X9 1139 aa11.99□□□□□ -0.49
GACAT1-201ENST00000419650 A0A1W2PP64 1363 aa11.99□□□□□ -0.49
GACAT1-201ENST00000419650 COL18A1P39060 1754 aa11.99□□□□□ -0.49
GACAT1-201ENST00000419650 NFAT5O94916 1531 aa11.98□□□□□ -0.49
GACAT1-201ENST00000419650 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.98□□□□□ -0.49
GACAT1-201ENST00000419650 LTN1O94822 1766 aa11.97□□□□□ -0.49
GACAT1-201ENST00000419650 COL5A2P05997 1499 aaPredicted RBP11.97□□□□□ -0.49
GACAT1-201ENST00000419650 EDC4Q6P2E9 1401 aaKnown RBP11.97□□□□□ -0.49
GACAT1-201ENST00000419650 SOX12O15370 315 aa11.97□□□□□ -0.49
GACAT1-201ENST00000419650 ONECUT3O60422 494 aaPredicted RBP11.97□□□□□ -0.49
GACAT1-201ENST00000419650 HDGFL2Q7Z4V5 671 aaPredicted RBP11.97□□□□□ -0.49
GACAT1-201ENST00000419650 PUS7Q96PZ0 661 aaKnown RBP11.97□□□□□ -0.49
GACAT1-201ENST00000419650 MYOM1P52179 1685 aa11.97□□□□□ -0.49
GACAT1-201ENST00000419650 NINLQ9Y2I6 1382 aa11.96□□□□□ -0.49
GACAT1-201ENST00000419650 SPATA31A1Q5TZJ5 1347 aa11.96□□□□□ -0.49
GACAT1-201ENST00000419650 EVA1CP58658 441 aa11.96□□□□□ -0.49
GACAT1-201ENST00000419650 NME9Q86XW9 330 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms