RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 AKAP17AQ02040 695 aaKnown RBP10.4□□□□□ -0.75
UBR4-206ENST00000419533 ANKRD45Q5TZF3 282 aa10.4□□□□□ -0.75
UBR4-206ENST00000419533 BCL2L13Q9BXK5 485 aa10.4□□□□□ -0.75
UBR4-206ENST00000419533 PRDM11Q9NQV5 511 aa10.4□□□□□ -0.75
UBR4-206ENST00000419533 RUFY2Q8WXA3 655 aa10.39□□□□□ -0.75
UBR4-206ENST00000419533 DDX19BQ9UMR2 479 aa10.39□□□□□ -0.75
UBR4-206ENST00000419533 FKBP5Q13451 457 aaPredicted RBP10.39□□□□□ -0.75
UBR4-206ENST00000419533 DIAPH3Q9NSV4 1193 aa10.39□□□□□ -0.75
UBR4-206ENST00000419533 CTDP1Q9Y5B0 961 aaPredicted RBP10.39□□□□□ -0.75
UBR4-206ENST00000419533 MAST1Q9Y2H9 1570 aa10.39□□□□□ -0.75
UBR4-206ENST00000419533 RPRD2Q5VT52 1461 aaKnown RBP10.39□□□□□ -0.75
UBR4-206ENST00000419533 IFIT2P09913 472 aaKnown RBP10.39□□□□□ -0.75
UBR4-206ENST00000419533 CENPQQ7L2Z9 268 aaPredicted RBP10.39□□□□□ -0.75
UBR4-206ENST00000419533 NGLY1Q96IV0 654 aa10.39□□□□□ -0.75
UBR4-206ENST00000419533 G3BP1Q13283 466 aaKnown RBP eCLIP10.38□□□□□ -0.758e-7■□□□□ 9.9
UBR4-206ENST00000419533 NCBP3Q53F19 620 aaKnown RBP10.38□□□□□ -0.75
UBR4-206ENST00000419533 NUTM2GQ5VZR2 741 aa10.38□□□□□ -0.75
UBR4-206ENST00000419533 GGNBP2Q9H3C7 697 aa10.38□□□□□ -0.75
UBR4-206ENST00000419533 NPHP3Q7Z494 1330 aa10.38□□□□□ -0.75
UBR4-206ENST00000419533 SMG6Q86US8 1419 aaKnown RBP10.38□□□□□ -0.75
UBR4-206ENST00000419533 CCDC61Q9Y6R9 512 aa10.38□□□□□ -0.75
UBR4-206ENST00000419533 HSP90AB4PQ58FF6 505 aa10.38□□□□□ -0.75
UBR4-206ENST00000419533 NECTIN2Q92692 538 aa10.38□□□□□ -0.75
UBR4-206ENST00000419533 RBM33Q96EV2 1170 aaKnown RBP10.38□□□□□ -0.75
UBR4-206ENST00000419533 C14orf93Q9H972 538 aaKnown RBP10.38□□□□□ -0.75
UBR4-206ENST00000419533 MBD5Q9P267 1494 aa10.37□□□□□ -0.75
UBR4-206ENST00000419533 TMEM2Q9UHN6 1383 aa10.37□□□□□ -0.75
UBR4-206ENST00000419533 NOL8Q76FK4 1167 aaKnown RBP10.37□□□□□ -0.75
UBR4-206ENST00000419533 NUDT16Q96DE0 195 aaKnown RBP10.37□□□□□ -0.75
UBR4-206ENST00000419533 KCNH5Q8NCM2 988 aa10.37□□□□□ -0.75
UBR4-206ENST00000419533 SLKQ9H2G2 1235 aaPredicted RBP10.37□□□□□ -0.75
UBR4-206ENST00000419533 NPHP4O75161 1426 aaPredicted RBP10.37□□□□□ -0.75
UBR4-206ENST00000419533 ADGBQ8N7X0 1667 aa10.37□□□□□ -0.75
UBR4-206ENST00000419533 SF3A1Q15459 793 aaKnown RBP10.36□□□□□ -0.75
UBR4-206ENST00000419533 CPLX2Q6PUV4 134 aaKnown RBP10.36□□□□□ -0.75
UBR4-206ENST00000419533 STRN4Q9NRL3 753 aa10.36□□□□□ -0.75
UBR4-206ENST00000419533 ZBED9Q6R2W3 1325 aa10.36□□□□□ -0.75
UBR4-206ENST00000419533 HMOX1P09601 288 aa10.36□□□□□ -0.75
UBR4-206ENST00000419533 PLEKHO1Q53GL0 409 aaPredicted RBP10.36□□□□□ -0.75
UBR4-206ENST00000419533 RIC3Q7Z5B4 369 aa10.36□□□□□ -0.75
UBR4-206ENST00000419533 GAS2L2Q8NHY3 880 aa10.36□□□□□ -0.75
UBR4-206ENST00000419533 FBXW7Q969H0 707 aa10.36□□□□□ -0.75
UBR4-206ENST00000419533 H3BQV1 296 aa10.36□□□□□ -0.75
UBR4-206ENST00000419533 IFFO2Q5TF58 517 aa10.36□□□□□ -0.75
UBR4-206ENST00000419533 DZIP1LQ8IYY4 767 aaKnown RBP10.36□□□□□ -0.75
UBR4-206ENST00000419533 KLHL34Q8N239 644 aa10.36□□□□□ -0.75
UBR4-206ENST00000419533 FAM184AQ8NB25 1140 aa10.36□□□□□ -0.75
UBR4-206ENST00000419533 ADGRF5Q8IZF2 1346 aa10.35□□□□□ -0.75
UBR4-206ENST00000419533 NPATQ14207 1427 aa10.35□□□□□ -0.75
UBR4-206ENST00000419533 WAPLQ7Z5K2 1190 aa10.35□□□□□ -0.75
UBR4-206ENST00000419533 LRRC59Q96AG4 307 aaKnown RBP10.35□□□□□ -0.75
UBR4-206ENST00000419533 UGGT1Q9NYU2 1555 aa10.35□□□□□ -0.75
UBR4-206ENST00000419533 KRT28Q7Z3Y7 464 aa10.35□□□□□ -0.75
UBR4-206ENST00000419533 IPO9Q96P70 1041 aaKnown RBP10.35□□□□□ -0.75
UBR4-206ENST00000419533 WASLO00401 505 aaPredicted RBP10.35□□□□□ -0.75
UBR4-206ENST00000419533 RRP1P56182 461 aaKnown RBP10.35□□□□□ -0.75
UBR4-206ENST00000419533 CCDC7Q96M83 1385 aa10.34□□□□□ -0.75
UBR4-206ENST00000419533 ZKSCAN1P17029 563 aaPredicted RBP10.34□□□□□ -0.75
UBR4-206ENST00000419533 COG6Q9Y2V7 657 aa10.34□□□□□ -0.75
UBR4-206ENST00000419533 TOM1L2Q6ZVM7 507 aa10.34□□□□□ -0.75
UBR4-206ENST00000419533 ADAMTS2O95450 1211 aa10.34□□□□□ -0.75
UBR4-206ENST00000419533 APPP05067 770 aa10.34□□□□□ -0.75
UBR4-206ENST00000419533 CABP1Q9NZU7 370 aa10.34□□□□□ -0.75
UBR4-206ENST00000419533 TCEAL9Q9UHQ7 104 aa10.34□□□□□ -0.75
UBR4-206ENST00000419533 TATP17735 454 aaPredicted RBP10.33□□□□□ -0.76
UBR4-206ENST00000419533 KIF7Q2M1P5 1343 aa10.33□□□□□ -0.76
UBR4-206ENST00000419533 ARHGEF40Q8TER5 1519 aa10.33□□□□□ -0.76
UBR4-206ENST00000419533 PHF14O94880 888 aa10.33□□□□□ -0.76
UBR4-206ENST00000419533 REC8O95072 547 aa10.33□□□□□ -0.76
UBR4-206ENST00000419533 WWC1Q8IX03 1113 aa10.33□□□□□ -0.76
UBR4-206ENST00000419533 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
UBR4-206ENST00000419533 ATP6V1DQ9Y5K8 247 aa10.33□□□□□ -0.76
UBR4-206ENST00000419533 RAD21O60216 631 aa10.33□□□□□ -0.76
UBR4-206ENST00000419533 XPCQ01831 940 aaPredicted RBP10.33□□□□□ -0.76
UBR4-206ENST00000419533 TRDNQ13061 729 aa10.33□□□□□ -0.76
UBR4-206ENST00000419533 FOXO3O43524 673 aa10.33□□□□□ -0.76
UBR4-206ENST00000419533 RNF20Q5VTR2 975 aa10.32□□□□□ -0.76
UBR4-206ENST00000419533 EFCAB6Q5THR3 1501 aa10.32□□□□□ -0.76
UBR4-206ENST00000419533 ERC2O15083 957 aa10.32□□□□□ -0.76
UBR4-206ENST00000419533 TRIM29Q14134 588 aa10.32□□□□□ -0.76
UBR4-206ENST00000419533 NBPF1Q3BBV0 1214 aa10.32□□□□□ -0.76
UBR4-206ENST00000419533 PZPP20742 1482 aa10.32□□□□□ -0.76
UBR4-206ENST00000419533 AIMP1Q12904 312 aaKnown RBP10.32□□□□□ -0.76
UBR4-206ENST00000419533 USP35Q9P2H5 1018 aa10.32□□□□□ -0.76
UBR4-206ENST00000419533 SCAF11Q99590 1463 aaKnown RBP10.32□□□□□ -0.76
UBR4-206ENST00000419533 PTPRKQ15262 1439 aa10.32□□□□□ -0.76
UBR4-206ENST00000419533 KIF6Q6ZMV9 814 aa10.31□□□□□ -0.76
UBR4-206ENST00000419533 FANCIQ9NVI1 1328 aa10.31□□□□□ -0.76
UBR4-206ENST00000419533 PLIN1O60240 522 aa10.31□□□□□ -0.76
UBR4-206ENST00000419533 CRBNQ96SW2 442 aa10.31□□□□□ -0.76
UBR4-206ENST00000419533 CDC42BPAQ5VT25 1732 aa10.31□□□□□ -0.76
UBR4-206ENST00000419533 CCDC30Q5VVM6 783 aa10.31□□□□□ -0.76
UBR4-206ENST00000419533 FOXD4L1Q9NU39 408 aa10.31□□□□□ -0.76
UBR4-206ENST00000419533 A2ML1A8K2U0 1454 aa10.31□□□□□ -0.76
UBR4-206ENST00000419533 ERICH2A1L162 156 aa10.31□□□□□ -0.76
UBR4-206ENST00000419533 MTHFSP49914 203 aa10.31□□□□□ -0.76
UBR4-206ENST00000419533 AAMPQ13685 434 aa10.31□□□□□ -0.76
UBR4-206ENST00000419533 FAM161AQ3B820 660 aa10.3□□□□□ -0.76
UBR4-206ENST00000419533 CREBRFQ8IUR6 639 aa10.3□□□□□ -0.76
UBR4-206ENST00000419533 CWC22Q9HCG8 908 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms