RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 RGPD1P0DJD0 1748 aa11.6□□□□□ -0.55
HLA-DPA1-241ENST00000417724 NRAPQ86VF7 1730 aa11.6□□□□□ -0.55
HLA-DPA1-241ENST00000417724 FAM182BQ5T319 152 aa11.6□□□□□ -0.55
HLA-DPA1-241ENST00000417724 PRDM11Q9NQV5 511 aa11.6□□□□□ -0.55
HLA-DPA1-241ENST00000417724 TRPM3Q9HCF6 1732 aaPredicted RBP11.6□□□□□ -0.55
HLA-DPA1-241ENST00000417724 ALS2Q96Q42 1657 aa11.59□□□□□ -0.55
HLA-DPA1-241ENST00000417724 ADGRB2O60241 1585 aa11.59□□□□□ -0.55
HLA-DPA1-241ENST00000417724 WASLO00401 505 aaPredicted RBP11.59□□□□□ -0.55
HLA-DPA1-241ENST00000417724 R3HDM1Q15032 1099 aaKnown RBP11.59□□□□□ -0.55
HLA-DPA1-241ENST00000417724 FAM196AQ6ZSG2 479 aa11.58□□□□□ -0.56
HLA-DPA1-241ENST00000417724 STAC3Q96MF2 364 aa11.58□□□□□ -0.56
HLA-DPA1-241ENST00000417724 PRR36Q9H6K5 1346 aa11.58□□□□□ -0.56
HLA-DPA1-241ENST00000417724 KDM2AQ9Y2K7 1162 aa11.57□□□□□ -0.56
HLA-DPA1-241ENST00000417724 DISP2A7MBM2 1401 aa11.57□□□□□ -0.56
HLA-DPA1-241ENST00000417724 SPATA31A1Q5TZJ5 1347 aa11.57□□□□□ -0.56
HLA-DPA1-241ENST00000417724 TULP4Q9NRJ4 1543 aa11.56□□□□□ -0.56
HLA-DPA1-241ENST00000417724 ADGRB1O14514 1584 aa11.56□□□□□ -0.56
HLA-DPA1-241ENST00000417724 TRIM37O94972 964 aa11.56□□□□□ -0.56
HLA-DPA1-241ENST00000417724 EZH2Q15910 746 aaKnown RBP11.56□□□□□ -0.56
HLA-DPA1-241ENST00000417724 DCAF11Q8TEB1 546 aa11.56□□□□□ -0.56
HLA-DPA1-241ENST00000417724 APBA3O96018 575 aa11.55□□□□□ -0.56
HLA-DPA1-241ENST00000417724 EVA1CP58658 441 aa11.55□□□□□ -0.56
HLA-DPA1-241ENST00000417724 CHRNA2Q15822 529 aa11.55□□□□□ -0.56
HLA-DPA1-241ENST00000417724 NUDT16Q96DE0 195 aaKnown RBP11.55□□□□□ -0.56
HLA-DPA1-241ENST00000417724 CAMKK2Q96RR4 588 aa11.55□□□□□ -0.56
HLA-DPA1-241ENST00000417724 STRN4Q9NRL3 753 aa11.55□□□□□ -0.56
HLA-DPA1-241ENST00000417724 THSD7AQ9UPZ6 1657 aa11.55□□□□□ -0.56
HLA-DPA1-241ENST00000417724 KIAA0232Q92628 1395 aa11.54□□□□□ -0.56
HLA-DPA1-241ENST00000417724 ZC3H6P61129 1189 aaKnown RBP11.54□□□□□ -0.56
HLA-DPA1-241ENST00000417724 PDE3BQ13370 1112 aa11.54□□□□□ -0.56
HLA-DPA1-241ENST00000417724 CRYBG1Q9Y4K1 1723 aa11.54□□□□□ -0.56
HLA-DPA1-241ENST00000417724 PARD3Q8TEW0 1356 aa11.54□□□□□ -0.56
HLA-DPA1-241ENST00000417724 TNS1Q9HBL0 1735 aaKnown RBP11.53□□□□□ -0.56
HLA-DPA1-241ENST00000417724 USP35Q9P2H5 1018 aa11.53□□□□□ -0.56
HLA-DPA1-241ENST00000417724 ITSN1Q15811 1721 aa11.52□□□□□ -0.56
HLA-DPA1-241ENST00000417724 NBPF8Q3BBV2 869 aa11.52□□□□□ -0.57
HLA-DPA1-241ENST00000417724 NBPF14Q5TI25 921 aa11.52□□□□□ -0.57
HLA-DPA1-241ENST00000417724 BARGINQ6ZT62 677 aa11.52□□□□□ -0.57
HLA-DPA1-241ENST00000417724 NUTM2GQ5VZR2 741 aa11.51□□□□□ -0.57
HLA-DPA1-241ENST00000417724 CDK19Q9BWU1 502 aa11.51□□□□□ -0.57
HLA-DPA1-241ENST00000417724 CCDC61Q9Y6R9 512 aa11.51□□□□□ -0.57
HLA-DPA1-241ENST00000417724 TCP11L2Q8N4U5 519 aa11.5□□□□□ -0.57
HLA-DPA1-241ENST00000417724 RAB3GAP2Q9H2M9 1393 aa11.5□□□□□ -0.57
HLA-DPA1-241ENST00000417724 ATP7BP35670 1465 aa11.5□□□□□ -0.57
HLA-DPA1-241ENST00000417724 C11orf95C9JLR9 678 aaPredicted RBP11.49□□□□□ -0.57
HLA-DPA1-241ENST00000417724 ABTB2Q8N961 1025 aa11.49□□□□□ -0.57
HLA-DPA1-241ENST00000417724 ACEP12821 1306 aa11.49□□□□□ -0.57
HLA-DPA1-241ENST00000417724 SSH2Q76I76 1423 aa11.49□□□□□ -0.57
HLA-DPA1-241ENST00000417724 PHRF1Q9P1Y6 1649 aaKnown RBP11.49□□□□□ -0.57
HLA-DPA1-241ENST00000417724 PLEKHG3A1L390 1219 aa11.48□□□□□ -0.57
HLA-DPA1-241ENST00000417724 DCAF8L1A6NGE4 600 aa11.48□□□□□ -0.57
HLA-DPA1-241ENST00000417724 LARP1Q6PKG0 1096 aaKnown RBP11.48□□□□□ -0.57
HLA-DPA1-241ENST00000417724 NLRP13Q86W25 1043 aa11.48□□□□□ -0.57
HLA-DPA1-241ENST00000417724 THRAP3Q9Y2W1 955 aaKnown RBP11.48□□□□□ -0.57
HLA-DPA1-241ENST00000417724 POLR3AO14802 1390 aaPredicted RBP11.48□□□□□ -0.57
HLA-DPA1-241ENST00000417724 ARHGEF28Q8N1W1 1705 aaKnown RBP11.48□□□□□ -0.57
HLA-DPA1-241ENST00000417724 CPDO75976 1380 aa11.47□□□□□ -0.57
HLA-DPA1-241ENST00000417724 SPON1Q9HCB6 807 aa11.47□□□□□ -0.57
HLA-DPA1-241ENST00000417724 PPP1R1BQ9UD71 204 aaPredicted RBP11.47□□□□□ -0.57
HLA-DPA1-241ENST00000417724 CAMTA1Q9Y6Y1 1673 aa11.46□□□□□ -0.57
HLA-DPA1-241ENST00000417724 GCP02774 474 aa11.46□□□□□ -0.57
HLA-DPA1-241ENST00000417724 YY1P25490 414 aa11.46□□□□□ -0.57
HLA-DPA1-241ENST00000417724 KCNQ2O43526 872 aa11.45□□□□□ -0.58
HLA-DPA1-241ENST00000417724 RREB1Q92766 1687 aa11.45□□□□□ -0.58
HLA-DPA1-241ENST00000417724 USP19O94966 1318 aa11.44□□□□□ -0.58
HLA-DPA1-241ENST00000417724 NUP188Q5SRE5 1749 aa11.43□□□□□ -0.58
HLA-DPA1-241ENST00000417724 SRPK2P78362 688 aaKnown RBP11.43□□□□□ -0.58
HLA-DPA1-241ENST00000417724 TOPAZ1Q8N9V7 1692 aa11.43□□□□□ -0.58
HLA-DPA1-241ENST00000417724 LMO7Q8WWI1 1683 aa11.43□□□□□ -0.58
HLA-DPA1-241ENST00000417724 BRD4O60885 1362 aaPredicted RBP11.42□□□□□ -0.58
HLA-DPA1-241ENST00000417724 NRKQ7Z2Y5 1582 aa11.42□□□□□ -0.58
HLA-DPA1-241ENST00000417724 PLSCR1O15162 318 aa11.42□□□□□ -0.58
HLA-DPA1-241ENST00000417724 CRB1P82279 1406 aa11.42□□□□□ -0.58
HLA-DPA1-241ENST00000417724 PARP4Q9UKK3 1724 aaKnown RBP11.41□□□□□ -0.58
HLA-DPA1-241ENST00000417724 ZBTB7CA1YPR0 619 aa11.41□□□□□ -0.58
HLA-DPA1-241ENST00000417724 NLRP6P59044 892 aa11.41□□□□□ -0.58
HLA-DPA1-241ENST00000417724 DDB1Q16531 1140 aa11.41□□□□□ -0.58
HLA-DPA1-241ENST00000417724 NINLQ9Y2I6 1382 aa11.41□□□□□ -0.58
HLA-DPA1-241ENST00000417724 COL5A2P05997 1499 aaPredicted RBP11.4□□□□□ -0.58
HLA-DPA1-241ENST00000417724 BCL11BQ9C0K0 894 aaPredicted RBP11.4□□□□□ -0.58
HLA-DPA1-241ENST00000417724 OVOS2A0A0G2JMS6 1433 aa11.4□□□□□ -0.58
HLA-DPA1-241ENST00000417724 OVOS2A0A0J9YW53 1432 aa11.4□□□□□ -0.58
HLA-DPA1-241ENST00000417724 OVOS2Q6IE36 1432 aa11.4□□□□□ -0.58
HLA-DPA1-241ENST00000417724 PPIP5K1Q6PFW1 1433 aa11.4□□□□□ -0.58
HLA-DPA1-241ENST00000417724 KIAA1210Q9ULL0 1709 aa11.4□□□□□ -0.58
HLA-DPA1-241ENST00000417724 AATKQ6ZMQ8 1374 aa11.4□□□□□ -0.59
HLA-DPA1-241ENST00000417724 NBPF1Q3BBV0 1214 aa11.39□□□□□ -0.59
HLA-DPA1-241ENST00000417724 TOM1L2Q6ZVM7 507 aa11.39□□□□□ -0.59
HLA-DPA1-241ENST00000417724 CABP2Q9NPB3 220 aa11.39□□□□□ -0.59
HLA-DPA1-241ENST00000417724 SBF2Q86WG5 1849 aa11.39□□□□□ -0.59
HLA-DPA1-241ENST00000417724 CENPJQ9HC77 1338 aaPredicted RBP11.38□□□□□ -0.59
HLA-DPA1-241ENST00000417724 CDCA7Q9BWT1 371 aaPredicted RBP11.38□□□□□ -0.59
HLA-DPA1-241ENST00000417724 CABP1Q9NZU7 370 aa11.38□□□□□ -0.59
HLA-DPA1-241ENST00000417724 RGPD3A6NKT7 1758 aaPredicted RBP11.38□□□□□ -0.59
HLA-DPA1-241ENST00000417724 RGPD4Q7Z3J3 1758 aa11.38□□□□□ -0.59
HLA-DPA1-241ENST00000417724 PEAK1Q9H792 1746 aa11.37□□□□□ -0.59
HLA-DPA1-241ENST00000417724 USP6P35125 1406 aa11.36□□□□□ -0.59
HLA-DPA1-241ENST00000417724 WDR17Q8IZU2 1322 aa11.35□□□□□ -0.59
HLA-DPA1-241ENST00000417724 PTF1AQ7RTS3 328 aa11.35□□□□□ -0.59
HLA-DPA1-241ENST00000417724 PROM2Q8N271 834 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms