RNA–Protein interactions for RNA: ENST00000416982.1

LINC01287-201, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 2 BASIC

Gene LINC01287, Length 2,624 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-201ENST00000416982 IFT172Q9UG01 1749 aa12.9□□□□□ -0.35
LINC01287-201ENST00000416982 PPLO60437 1756 aa12.9□□□□□ -0.35
LINC01287-201ENST00000416982 CHMP5Q9NZZ3 219 aa12.89□□□□□ -0.35
LINC01287-201ENST00000416982 PPP6R1Q9UPN7 881 aa12.89□□□□□ -0.35
LINC01287-201ENST00000416982 NINLQ9Y2I6 1382 aa12.89□□□□□ -0.35
LINC01287-201ENST00000416982 BCAR3O75815 825 aa12.89□□□□□ -0.35
LINC01287-201ENST00000416982 CLTCQ00610 1675 aaKnown RBP12.88□□□□□ -0.35
LINC01287-201ENST00000416982 EVC2Q86UK5 1308 aa12.88□□□□□ -0.35
LINC01287-201ENST00000416982 TXNDC2Q86VQ3 553 aa12.88□□□□□ -0.35
LINC01287-201ENST00000416982 UPF2Q9HAU5 1272 aaKnown RBP12.88□□□□□ -0.35
LINC01287-201ENST00000416982 PRDM4Q9UKN5 801 aa12.88□□□□□ -0.35
LINC01287-201ENST00000416982 MYO5BQ9ULV0 1848 aa12.88□□□□□ -0.35
LINC01287-201ENST00000416982 PREX1Q8TCU6 1659 aa12.88□□□□□ -0.35
LINC01287-201ENST00000416982 PDE3AQ14432 1141 aa12.88□□□□□ -0.35
LINC01287-201ENST00000416982 CLUAP1Q96AJ1 413 aa12.88□□□□□ -0.35
LINC01287-201ENST00000416982 WDR43Q15061 677 aaKnown RBP eCLIP12.87□□□□□ -0.35
LINC01287-201ENST00000416982 SPINK5Q9NQ38 1064 aaPredicted RBP12.87□□□□□ -0.35
LINC01287-201ENST00000416982 MORC1Q86VD1 984 aa12.87□□□□□ -0.35
LINC01287-201ENST00000416982 TMEM131LA2VDJ0 1609 aa12.86□□□□□ -0.35
LINC01287-201ENST00000416982 ZNF692Q9BU19 519 aaPredicted RBP12.86□□□□□ -0.35
LINC01287-201ENST00000416982 NSD3Q9BZ95 1437 aa12.86□□□□□ -0.35
LINC01287-201ENST00000416982 DDX11L8A8MPP1 907 aa12.86□□□□□ -0.35
LINC01287-201ENST00000416982 KIAA1210Q9ULL0 1709 aa12.86□□□□□ -0.35
LINC01287-201ENST00000416982 NCKAP5LQ9HCH0 1330 aa12.85□□□□□ -0.35
LINC01287-201ENST00000416982 AGLP35573 1532 aa12.85□□□□□ -0.35
LINC01287-201ENST00000416982 FBLN1P23142 703 aa12.85□□□□□ -0.35
LINC01287-201ENST00000416982 CDK19Q9BWU1 502 aa12.85□□□□□ -0.35
LINC01287-201ENST00000416982 A2ML1A8K2U0 1454 aa12.85□□□□□ -0.35
LINC01287-201ENST00000416982 NCOA3Q9Y6Q9 1424 aa12.85□□□□□ -0.35
LINC01287-201ENST00000416982 NUTM2FA1L443 756 aa12.85□□□□□ -0.35
LINC01287-201ENST00000416982 SLC26A8Q96RN1 970 aa12.85□□□□□ -0.35
LINC01287-201ENST00000416982 CABP1Q9NZU7 370 aa12.85□□□□□ -0.35
LINC01287-201ENST00000416982 RIMS2Q9UQ26 1411 aa12.85□□□□□ -0.35
LINC01287-201ENST00000416982 ASXL1Q8IXJ9 1541 aa12.84□□□□□ -0.35
LINC01287-201ENST00000416982 LTKP29376 864 aa12.84□□□□□ -0.35
LINC01287-201ENST00000416982 GGNBP2Q9H3C7 697 aa12.84□□□□□ -0.35
LINC01287-201ENST00000416982 YTHDC2Q9H6S0 1430 aaKnown RBP12.84□□□□□ -0.35
LINC01287-201ENST00000416982 SBNO2Q9Y2G9 1366 aa12.84□□□□□ -0.35
LINC01287-201ENST00000416982 KIAA1211Q6ZU35 1233 aa12.84□□□□□ -0.35
LINC01287-201ENST00000416982 SPRYD3Q8NCJ5 442 aa12.84□□□□□ -0.35
LINC01287-201ENST00000416982 TRIM44Q96DX7 344 aaPredicted RBP12.84□□□□□ -0.35
LINC01287-201ENST00000416982 METP08581 1390 aa12.84□□□□□ -0.35
LINC01287-201ENST00000416982 ZC3H13Q5T200 1668 aaKnown RBP12.83□□□□□ -0.36
LINC01287-201ENST00000416982 SETBP1Q9Y6X0 1596 aa12.83□□□□□ -0.36
LINC01287-201ENST00000416982 DDIT3P35638 169 aa12.83□□□□□ -0.36
LINC01287-201ENST00000416982 GAS2L3Q86XJ1 694 aa12.83□□□□□ -0.36
LINC01287-201ENST00000416982 ZFYVE9O95405 1425 aa12.82□□□□□ -0.36
LINC01287-201ENST00000416982 E9PSI1 815 aa12.82□□□□□ -0.36
LINC01287-201ENST00000416982 NEUROD2Q15784 382 aa12.82□□□□□ -0.36
LINC01287-201ENST00000416982 MYOM1P52179 1685 aa12.82□□□□□ -0.36
LINC01287-201ENST00000416982 ARHGEF40Q8TER5 1519 aa12.82□□□□□ -0.36
LINC01287-201ENST00000416982 TNRQ92752 1358 aa12.82□□□□□ -0.36
LINC01287-201ENST00000416982 APAF1O14727 1248 aa12.82□□□□□ -0.36
LINC01287-201ENST00000416982 MTHFSP49914 203 aa12.82□□□□□ -0.36
LINC01287-201ENST00000416982 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC01287-201ENST00000416982 KDM5AP29375 1690 aaKnown RBP12.81□□□□□ -0.36
LINC01287-201ENST00000416982 TERF1P54274 439 aa12.81□□□□□ -0.36
LINC01287-201ENST00000416982 RIPK4P57078 832 aa12.81□□□□□ -0.36
LINC01287-201ENST00000416982 PANK1Q8TE04 598 aa12.81□□□□□ -0.36
LINC01287-201ENST00000416982 CHMP4AQ9BY43 222 aa12.81□□□□□ -0.36
LINC01287-201ENST00000416982 COG6Q9Y2V7 657 aa12.81□□□□□ -0.36
LINC01287-201ENST00000416982 OFD1O75665 1012 aa12.81□□□□□ -0.36
LINC01287-201ENST00000416982 PMFBP1Q8TBY8 1022 aa12.81□□□□□ -0.36
LINC01287-201ENST00000416982 PDZRN3Q9UPQ7 1066 aa12.81□□□□□ -0.36
LINC01287-201ENST00000416982 TULP4Q9NRJ4 1543 aa12.8□□□□□ -0.36
LINC01287-201ENST00000416982 AAMPQ13685 434 aa12.8□□□□□ -0.36
LINC01287-201ENST00000416982 PPP1R9BQ96SB3 815 aa12.8□□□□□ -0.36
LINC01287-201ENST00000416982 QRICH2Q9H0J4 1663 aa12.8□□□□□ -0.36
LINC01287-201ENST00000416982 RRP7AQ9Y3A4 280 aaKnown RBP12.79□□□□□ -0.36
LINC01287-201ENST00000416982 DMRT2Q9Y5R5 561 aa12.79□□□□□ -0.36
LINC01287-201ENST00000416982 ALKQ9UM73 1620 aa12.79□□□□□ -0.36
LINC01287-201ENST00000416982 PCDHB15Q9Y5E8 787 aa12.79□□□□□ -0.36
LINC01287-201ENST00000416982 REREQ9P2R6 1566 aa12.79□□□□□ -0.36
LINC01287-201ENST00000416982 A0A1W2PP64 1363 aa12.79□□□□□ -0.36
LINC01287-201ENST00000416982 PTPRMP28827 1452 aa12.78□□□□□ -0.36
LINC01287-201ENST00000416982 CCDC173Q0VFZ6 552 aa12.78□□□□□ -0.36
LINC01287-201ENST00000416982 C22orf23Q9BZE7 217 aa12.78□□□□□ -0.36
LINC01287-201ENST00000416982 SPATA31D1Q6ZQQ2 1576 aa12.78□□□□□ -0.36
LINC01287-201ENST00000416982 FYB1O15117 783 aa12.77□□□□□ -0.36
LINC01287-201ENST00000416982 ZSCAN30Q86W11 494 aa12.77□□□□□ -0.36
LINC01287-201ENST00000416982 MAP7D2Q96T17 732 aa12.77□□□□□ -0.36
LINC01287-201ENST00000416982 RBM10P98175 930 aaKnown RBP12.77□□□□□ -0.37
LINC01287-201ENST00000416982 NPC1L1Q9UHC9 1359 aa12.77□□□□□ -0.37
LINC01287-201ENST00000416982 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.76□□□□□ -0.37
LINC01287-201ENST00000416982 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.76□□□□□ -0.37
LINC01287-201ENST00000416982 ANKRD36BQ8N2N9 1353 aa12.76□□□□□ -0.37
LINC01287-201ENST00000416982 TMEM2Q9UHN6 1383 aa12.76□□□□□ -0.37
LINC01287-201ENST00000416982 NGEFQ8N5V2 710 aa12.75□□□□□ -0.37
LINC01287-201ENST00000416982 ZRANB1Q9UGI0 708 aa12.75□□□□□ -0.37
LINC01287-201ENST00000416982 HSCBQ8IWL3 235 aa12.75□□□□□ -0.37
LINC01287-201ENST00000416982 TNPO1Q92973 898 aaKnown RBP12.75□□□□□ -0.37
LINC01287-201ENST00000416982 TERF2IPQ9NYB0 399 aa12.75□□□□□ -0.37
LINC01287-201ENST00000416982 ARHGEF28Q8N1W1 1705 aaKnown RBP12.75□□□□□ -0.37
LINC01287-201ENST00000416982 MYO3AQ8NEV4 1616 aa12.75□□□□□ -0.37
LINC01287-201ENST00000416982 CANXP27824 592 aaKnown RBP12.75□□□□□ -0.37
LINC01287-201ENST00000416982 HDGFP51858 240 aaKnown RBP12.75□□□□□ -0.37
LINC01287-201ENST00000416982 SKOR2Q2VWA4 1001 aaPredicted RBP12.75□□□□□ -0.37
LINC01287-201ENST00000416982 RBM33Q96EV2 1170 aaKnown RBP12.75□□□□□ -0.37
LINC01287-201ENST00000416982 SMC5Q8IY18 1101 aa12.74□□□□□ -0.37
LINC01287-201ENST00000416982 CIZ1Q9ULV3 898 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms