RNA–Protein interactions for RNA: ENST00000416942.2

GTF3AP1-201, Transcript of general transcription factor IIIA pseudogene 1, humanhuman

BASIC

Gene GTF3AP1, Length 1,004 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP1-201ENST00000416942 SPRYD7Q5W111 196 aa11.84□□□□□ -0.51
GTF3AP1-201ENST00000416942 NESP48681 1621 aa11.83□□□□□ -0.52
GTF3AP1-201ENST00000416942 TRIM32Q13049 653 aa11.83□□□□□ -0.52
GTF3AP1-201ENST00000416942 HMX1Q9NP08 348 aaPredicted RBP11.83□□□□□ -0.52
GTF3AP1-201ENST00000416942 CD2BP2O95400 341 aaKnown RBP11.82□□□□□ -0.52
GTF3AP1-201ENST00000416942 NR6A1Q15406 480 aa11.8□□□□□ -0.52
GTF3AP1-201ENST00000416942 ZNF598Q86UK7 904 aaKnown RBP11.8□□□□□ -0.52
GTF3AP1-201ENST00000416942 ZNF697Q5TEC3 545 aa11.79□□□□□ -0.52
GTF3AP1-201ENST00000416942 SNRKQ9NRH2 765 aa11.79□□□□□ -0.52
GTF3AP1-201ENST00000416942 EPS8L1Q8TE68 723 aa11.78□□□□□ -0.52
GTF3AP1-201ENST00000416942 LINC01559Q495D7 138 aa11.77□□□□□ -0.53
GTF3AP1-201ENST00000416942 MTMR14Q8NCE2 650 aa11.77□□□□□ -0.53
GTF3AP1-201ENST00000416942 BAP1Q92560 729 aa11.77□□□□□ -0.53
GTF3AP1-201ENST00000416942 TRIM34Q9BYJ4 488 aa11.77□□□□□ -0.53
GTF3AP1-201ENST00000416942 SOCS7O14512 581 aa11.76□□□□□ -0.53
GTF3AP1-201ENST00000416942 SKOR1P84550 965 aa11.76□□□□□ -0.53
GTF3AP1-201ENST00000416942 ARMC2Q8NEN0 867 aa11.76□□□□□ -0.53
GTF3AP1-201ENST00000416942 GJD4Q96KN9 370 aaPredicted RBP11.76□□□□□ -0.53
GTF3AP1-201ENST00000416942 WNT7BP56706 349 aa11.75□□□□□ -0.53
GTF3AP1-201ENST00000416942 SH3BP2P78314 561 aa11.74□□□□□ -0.53
GTF3AP1-201ENST00000416942 ZNF511Q8NB15 262 aa11.74□□□□□ -0.53
GTF3AP1-201ENST00000416942 FKBPLQ9UIM3 349 aa11.74□□□□□ -0.53
GTF3AP1-201ENST00000416942 NCAPD3P42695 1498 aa11.74□□□□□ -0.53
GTF3AP1-201ENST00000416942 MCM6Q14566 821 aa11.73□□□□□ -0.53
GTF3AP1-201ENST00000416942 NBPF14Q5TI25 921 aa11.72□□□□□ -0.53
GTF3AP1-201ENST00000416942 THOC2Q8NI27 1593 aaKnown RBP11.71□□□□□ -0.53
GTF3AP1-201ENST00000416942 APBB1O00213 710 aa11.71□□□□□ -0.53
GTF3AP1-201ENST00000416942 GPKOWQ92917 476 aaPredicted RBP eCLIP11.71□□□□□ -0.53
GTF3AP1-201ENST00000416942 ZC3H4Q9UPT8 1303 aaKnown RBP11.7□□□□□ -0.54
GTF3AP1-201ENST00000416942 FOXC1Q12948 553 aa11.7□□□□□ -0.54
GTF3AP1-201ENST00000416942 RC3H1Q5TC82 1133 aaKnown RBP11.7□□□□□ -0.54
GTF3AP1-201ENST00000416942 TRIM67Q6ZTA4 783 aa11.7□□□□□ -0.54
GTF3AP1-201ENST00000416942 PNMA1Q8ND90 353 aa11.7□□□□□ -0.54
GTF3AP1-201ENST00000416942 PKD2L1Q9P0L9 805 aa11.7□□□□□ -0.54
GTF3AP1-201ENST00000416942 WNT7AO00755 349 aa11.69□□□□□ -0.54
GTF3AP1-201ENST00000416942 GDF9O60383 454 aa11.69□□□□□ -0.54
GTF3AP1-201ENST00000416942 FLIIQ13045 1269 aa11.69□□□□□ -0.54
GTF3AP1-201ENST00000416942 SMARCA2P51531 1590 aa11.68□□□□□ -0.54
GTF3AP1-201ENST00000416942 FOXJ1Q92949 421 aa11.68□□□□□ -0.54
GTF3AP1-201ENST00000416942 NDUFB9Q9Y6M9 179 aa11.68□□□□□ -0.54
GTF3AP1-201ENST00000416942 TNFRSF10AO00220 468 aa11.67□□□□□ -0.54
GTF3AP1-201ENST00000416942 PDXDC2PQ6P474 469 aa11.67□□□□□ -0.54
GTF3AP1-201ENST00000416942 EHBP1Q8NDI1 1231 aa11.67□□□□□ -0.54
GTF3AP1-201ENST00000416942 PRR20EP86478 221 aa11.66□□□□□ -0.54
GTF3AP1-201ENST00000416942 PRR20CP86479 221 aa11.66□□□□□ -0.54
GTF3AP1-201ENST00000416942 PRR20DP86480 221 aa11.66□□□□□ -0.54
GTF3AP1-201ENST00000416942 PRR20BP86481 221 aa11.66□□□□□ -0.54
GTF3AP1-201ENST00000416942 PRR20AP86496 221 aa11.66□□□□□ -0.54
GTF3AP1-201ENST00000416942 SH3BP5LQ7L8J4 393 aa11.66□□□□□ -0.54
GTF3AP1-201ENST00000416942 BPHLQ86WA6 291 aaPredicted RBP11.66□□□□□ -0.54
GTF3AP1-201ENST00000416942 MRGPRX2Q96LB1 330 aa11.66□□□□□ -0.54
GTF3AP1-201ENST00000416942 AGERQ15109 404 aa11.65□□□□□ -0.54
GTF3AP1-201ENST00000416942 PDZRN3Q9UPQ7 1066 aa11.65□□□□□ -0.54
GTF3AP1-201ENST00000416942 ATAD2BQ9ULI0 1458 aa11.64□□□□□ -0.55
GTF3AP1-201ENST00000416942 GPR37L1O60883 481 aa11.64□□□□□ -0.55
GTF3AP1-201ENST00000416942 C4orf48Q5BLP8 95 aa11.64□□□□□ -0.55
GTF3AP1-201ENST00000416942 SH3RF1Q7Z6J0 888 aa11.64□□□□□ -0.55
GTF3AP1-201ENST00000416942 PRM3Q9NNZ6 103 aa11.64□□□□□ -0.55
GTF3AP1-201ENST00000416942 TBC1D2BQ9UPU7 963 aa11.64□□□□□ -0.55
GTF3AP1-201ENST00000416942 VARSP26640 1264 aaKnown RBP11.63□□□□□ -0.55
GTF3AP1-201ENST00000416942 ARHGAP9Q9BRR9 750 aa11.62□□□□□ -0.55
GTF3AP1-201ENST00000416942 IRX2Q9BZI1 471 aaPredicted RBP11.62□□□□□ -0.55
GTF3AP1-201ENST00000416942 GPSM3Q9Y4H4 160 aa11.62□□□□□ -0.55
GTF3AP1-201ENST00000416942 MAGEB6P1A0A0J9YX57 407 aa11.61□□□□□ -0.55
GTF3AP1-201ENST00000416942 GFRA3O60609 400 aa11.61□□□□□ -0.55
GTF3AP1-201ENST00000416942 PTK2Q05397 1052 aa11.61□□□□□ -0.55
GTF3AP1-201ENST00000416942 CARD14Q9BXL6 1004 aa11.61□□□□□ -0.55
GTF3AP1-201ENST00000416942 GDPD2Q9HCC8 539 aa11.61□□□□□ -0.55
GTF3AP1-201ENST00000416942 GTF3C3Q9Y5Q9 886 aa11.61□□□□□ -0.55
GTF3AP1-201ENST00000416942 SIAH2O43255 324 aa11.6□□□□□ -0.55
GTF3AP1-201ENST00000416942 FAM174AQ8TBP5 190 aa11.6□□□□□ -0.55
GTF3AP1-201ENST00000416942 OCSTAMPQ9BR26 566 aa11.6□□□□□ -0.55
GTF3AP1-201ENST00000416942 CYP4X1Q8N118 509 aa11.59□□□□□ -0.55
GTF3AP1-201ENST00000416942 C1QTNF2Q9BXJ5 285 aa11.59□□□□□ -0.55
GTF3AP1-201ENST00000416942 TOR4AQ9NXH8 423 aa11.59□□□□□ -0.55
GTF3AP1-201ENST00000416942 COG6Q9Y2V7 657 aa11.59□□□□□ -0.55
GTF3AP1-201ENST00000416942 UBTFP17480 764 aaKnown RBP11.58□□□□□ -0.56
GTF3AP1-201ENST00000416942 ZBTB33Q86T24 672 aa11.58□□□□□ -0.56
GTF3AP1-201ENST00000416942 SNIP1Q8TAD8 396 aaKnown RBP11.58□□□□□ -0.56
GTF3AP1-201ENST00000416942 TTC24A2A3L6 582 aaPredicted RBP11.57□□□□□ -0.56
GTF3AP1-201ENST00000416942 ZBBXA8MT70 800 aa11.57□□□□□ -0.56
GTF3AP1-201ENST00000416942 NRG2O14511 850 aaPredicted RBP11.57□□□□□ -0.56
GTF3AP1-201ENST00000416942 LAPTM4AQ15012 233 aa11.57□□□□□ -0.56
GTF3AP1-201ENST00000416942 POM121Q96HA1 1249 aa11.57□□□□□ -0.56
GTF3AP1-201ENST00000416942 TLL2Q9Y6L7 1015 aa11.57□□□□□ -0.56
GTF3AP1-201ENST00000416942 FBXO45P0C2W1 286 aa11.56□□□□□ -0.56
GTF3AP1-201ENST00000416942 ABL2P42684 1182 aa11.56□□□□□ -0.56
GTF3AP1-201ENST00000416942 ERFEQ4G0M1 354 aa11.56□□□□□ -0.56
GTF3AP1-201ENST00000416942 ADAM32Q8TC27 787 aa11.56□□□□□ -0.56
GTF3AP1-201ENST00000416942 PDS5BQ9NTI5 1447 aa11.55□□□□□ -0.56
GTF3AP1-201ENST00000416942 IRF5Q13568 498 aa11.55□□□□□ -0.56
GTF3AP1-201ENST00000416942 TRMT44Q8IYL2 757 aaKnown RBP11.55□□□□□ -0.56
GTF3AP1-201ENST00000416942 MPNDQ8N594 471 aa11.55□□□□□ -0.56
GTF3AP1-201ENST00000416942 KIF21AQ7Z4S6 1674 aa11.55□□□□□ -0.56
GTF3AP1-201ENST00000416942 BAZ1AQ9NRL2 1556 aaPredicted RBP11.54□□□□□ -0.56
GTF3AP1-201ENST00000416942 RAD21O60216 631 aa11.54□□□□□ -0.56
GTF3AP1-201ENST00000416942 ALDH1A1P00352 501 aa11.54□□□□□ -0.56
GTF3AP1-201ENST00000416942 NR1H3Q13133 447 aa11.54□□□□□ -0.56
GTF3AP1-201ENST00000416942 HMGXB3Q12766 1538 aa11.54□□□□□ -0.56
GTF3AP1-201ENST00000416942 J3QL48 77 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms