RNA–Protein interactions for RNA: ENST00000416754.1

RUNX1-206, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-206ENST00000416754 SPATA31A5Q5VU36 1347 aa13.36□□□□□ -0.27
RUNX1-206ENST00000416754 SPATA31A7Q8IWB4 1347 aa13.36□□□□□ -0.27
RUNX1-206ENST00000416754 SBNO1A3KN83 1393 aa13.35□□□□□ -0.27
RUNX1-206ENST00000416754 APBA3O96018 575 aa13.35□□□□□ -0.27
RUNX1-206ENST00000416754 ATXN8OSP0DMR3 200 aa13.35□□□□□ -0.27
RUNX1-206ENST00000416754 RBM42Q9BTD8 480 aaKnown RBP13.35□□□□□ -0.27
RUNX1-206ENST00000416754 FMN2Q9NZ56 1722 aa13.34□□□□□ -0.27
RUNX1-206ENST00000416754 NWD2Q9ULI1 1742 aa13.33□□□□□ -0.27
RUNX1-206ENST00000416754 PPLO60437 1756 aa13.33□□□□□ -0.28
RUNX1-206ENST00000416754 DISP2A7MBM2 1401 aa13.33□□□□□ -0.28
RUNX1-206ENST00000416754 ARHGEF10O15013 1369 aa13.32□□□□□ -0.28
RUNX1-206ENST00000416754 RGPD8O14715 1765 aaPredicted RBP13.32□□□□□ -0.28
RUNX1-206ENST00000416754 RRBP1Q9P2E9 1410 aaKnown RBP13.32□□□□□ -0.28
RUNX1-206ENST00000416754 YTHDC2Q9H6S0 1430 aaKnown RBP13.31□□□□□ -0.28
RUNX1-206ENST00000416754 KIF1AQ12756 1690 aa13.31□□□□□ -0.28
RUNX1-206ENST00000416754 NRAPQ86VF7 1730 aa13.3□□□□□ -0.28
RUNX1-206ENST00000416754 NRXN1Q9ULB1 1477 aa13.3□□□□□ -0.28
RUNX1-206ENST00000416754 CHRNA2Q15822 529 aa13.3□□□□□ -0.28
RUNX1-206ENST00000416754 FAM196AQ6ZSG2 479 aa13.3□□□□□ -0.28
RUNX1-206ENST00000416754 PRAM1Q96QH2 718 aa13.3□□□□□ -0.28
RUNX1-206ENST00000416754 RGPD1P0DJD0 1748 aa13.3□□□□□ -0.28
RUNX1-206ENST00000416754 ABCA3Q99758 1704 aa13.3□□□□□ -0.28
RUNX1-206ENST00000416754 CFAP70Q5T0N1 1121 aa13.29□□□□□ -0.28
RUNX1-206ENST00000416754 SIRT1Q96EB6 747 aa13.29□□□□□ -0.28
RUNX1-206ENST00000416754 STRN4Q9NRL3 753 aa13.29□□□□□ -0.28
RUNX1-206ENST00000416754 PPP1R1BQ9UD71 204 aaPredicted RBP13.29□□□□□ -0.28
RUNX1-206ENST00000416754 TNS1Q9HBL0 1735 aaKnown RBP13.29□□□□□ -0.28
RUNX1-206ENST00000416754 HIRIP3Q9BW71 556 aaPredicted RBP13.28□□□□□ -0.28
RUNX1-206ENST00000416754 PRDM11Q9NQV5 511 aa13.28□□□□□ -0.28
RUNX1-206ENST00000416754 USP35Q9P2H5 1018 aa13.28□□□□□ -0.28
RUNX1-206ENST00000416754 SPATA31A1Q5TZJ5 1347 aa13.28□□□□□ -0.28
RUNX1-206ENST00000416754 KCNQ2O43526 872 aa13.27□□□□□ -0.29
RUNX1-206ENST00000416754 SPON1Q9HCB6 807 aa13.27□□□□□ -0.29
RUNX1-206ENST00000416754 SPATA31E1Q6ZUB1 1445 aa13.27□□□□□ -0.29
RUNX1-206ENST00000416754 PRR36Q9H6K5 1346 aa13.26□□□□□ -0.29
RUNX1-206ENST00000416754 C14orf93Q9H972 538 aaKnown RBP13.26□□□□□ -0.29
RUNX1-206ENST00000416754 THSD7AQ9UPZ6 1657 aa13.26□□□□□ -0.29
RUNX1-206ENST00000416754 PIK3C2GO75747 1445 aa13.25□□□□□ -0.29
RUNX1-206ENST00000416754 ANKRD30BQ9BXX2 1392 aa13.25□□□□□ -0.29
RUNX1-206ENST00000416754 ACIN1Q9UKV3 1341 aaKnown RBP13.25□□□□□ -0.29
RUNX1-206ENST00000416754 PAK3O75914 559 aaPredicted RBP13.25□□□□□ -0.29
RUNX1-206ENST00000416754 ZC3H6P61129 1189 aaKnown RBP13.25□□□□□ -0.29
RUNX1-206ENST00000416754 NBPF8Q3BBV2 869 aa13.25□□□□□ -0.29
RUNX1-206ENST00000416754 NBPF14Q5TI25 921 aa13.25□□□□□ -0.29
RUNX1-206ENST00000416754 PDGFDQ9GZP0 370 aaPredicted RBP13.25□□□□□ -0.29
RUNX1-206ENST00000416754 KIAA0232Q92628 1395 aa13.24□□□□□ -0.29
RUNX1-206ENST00000416754 NUTM2GQ5VZR2 741 aa13.24□□□□□ -0.29
RUNX1-206ENST00000416754 ZNF784Q8NCA9 323 aaPredicted RBP13.24□□□□□ -0.29
RUNX1-206ENST00000416754 POGKQ9P215 609 aa13.24□□□□□ -0.29
RUNX1-206ENST00000416754 COL14A1Q05707 1796 aaKnown RBP13.24□□□□□ -0.29
RUNX1-206ENST00000416754 KNDC1Q76NI1 1749 aa13.23□□□□□ -0.29
RUNX1-206ENST00000416754 IFT172Q9UG01 1749 aa13.23□□□□□ -0.29
RUNX1-206ENST00000416754 PDE3BQ13370 1112 aa13.23□□□□□ -0.29
RUNX1-206ENST00000416754 GPRASP1Q5JY77 1395 aa13.22□□□□□ -0.29
RUNX1-206ENST00000416754 DHX57Q6P158 1386 aaKnown RBP13.22□□□□□ -0.29
RUNX1-206ENST00000416754 PARD3Q8TEW0 1356 aa13.22□□□□□ -0.29
RUNX1-206ENST00000416754 MINK1Q8N4C8 1332 aaPredicted RBP13.22□□□□□ -0.29
RUNX1-206ENST00000416754 TRPM3Q9HCF6 1732 aaPredicted RBP13.22□□□□□ -0.29
RUNX1-206ENST00000416754 CAMTA1Q9Y6Y1 1673 aa13.21□□□□□ -0.29
RUNX1-206ENST00000416754 SENP3-EIF4A1A0A087X0R7 540 aa13.21□□□□□ -0.29
RUNX1-206ENST00000416754 LARP1Q6PKG0 1096 aaKnown RBP13.21□□□□□ -0.29
RUNX1-206ENST00000416754 PTF1AQ7RTS3 328 aa13.21□□□□□ -0.29
RUNX1-206ENST00000416754 NGDNQ8NEJ9 315 aaKnown RBP13.21□□□□□ -0.29
RUNX1-206ENST00000416754 ANO8Q9HCE9 1232 aaPredicted RBP13.21□□□□□ -0.29
RUNX1-206ENST00000416754 ZBTB12Q9Y330 459 aaPredicted RBP13.21□□□□□ -0.29
RUNX1-206ENST00000416754 NINLQ9Y2I6 1382 aa13.2□□□□□ -0.3
RUNX1-206ENST00000416754 MKRN4PQ13434 485 aaPredicted RBP13.2□□□□□ -0.3
RUNX1-206ENST00000416754 TRAK1Q9UPV9 953 aa13.2□□□□□ -0.3
RUNX1-206ENST00000416754 ANKARQ7Z5J8 1434 aa13.2□□□□□ -0.3
RUNX1-206ENST00000416754 ADGRB2O60241 1585 aa13.2□□□□□ -0.3
RUNX1-206ENST00000416754 NUP188Q5SRE5 1749 aa13.19□□□□□ -0.3
RUNX1-206ENST00000416754 ALS2Q96Q42 1657 aa13.19□□□□□ -0.3
RUNX1-206ENST00000416754 ZBTB7AO95365 584 aa13.19□□□□□ -0.3
RUNX1-206ENST00000416754 EVA1CP58658 441 aa13.19□□□□□ -0.3
RUNX1-206ENST00000416754 CHRDL2Q6WN34 429 aa13.19□□□□□ -0.3
RUNX1-206ENST00000416754 BARGINQ6ZT62 677 aa13.18□□□□□ -0.3
RUNX1-206ENST00000416754 MPHOSPH9Q99550 1183 aa13.18□□□□□ -0.3
RUNX1-206ENST00000416754 RREB1Q92766 1687 aa13.18□□□□□ -0.3
RUNX1-206ENST00000416754 AKT1S1Q96B36 256 aa13.17□□□□□ -0.3
RUNX1-206ENST00000416754 WASLO00401 505 aaPredicted RBP13.16□□□□□ -0.3
RUNX1-206ENST00000416754 PTGER2P43116 358 aa13.16□□□□□ -0.3
RUNX1-206ENST00000416754 IFFO2Q5TF58 517 aa13.16□□□□□ -0.3
RUNX1-206ENST00000416754 PROM2Q8N271 834 aa13.16□□□□□ -0.3
RUNX1-206ENST00000416754 TCP11L2Q8N4U5 519 aa13.16□□□□□ -0.3
RUNX1-206ENST00000416754 SSH2Q76I76 1423 aa13.15□□□□□ -0.3
RUNX1-206ENST00000416754 C1QTNF8P60827 252 aa13.15□□□□□ -0.3
RUNX1-206ENST00000416754 REM2Q8IYK8 340 aaPredicted RBP13.15□□□□□ -0.3
RUNX1-206ENST00000416754 CRYBG1Q9Y4K1 1723 aa13.15□□□□□ -0.3
RUNX1-206ENST00000416754 NUDT16Q96DE0 195 aaKnown RBP13.13□□□□□ -0.31
RUNX1-206ENST00000416754 FHDC1Q9C0D6 1143 aaPredicted RBP13.13□□□□□ -0.31
RUNX1-206ENST00000416754 SYT17Q9BSW7 474 aa13.12□□□□□ -0.31
RUNX1-206ENST00000416754 BCL11BQ9C0K0 894 aaPredicted RBP13.12□□□□□ -0.31
RUNX1-206ENST00000416754 NRKQ7Z2Y5 1582 aa13.11□□□□□ -0.31
RUNX1-206ENST00000416754 UTRNP46939 3433 aa13.11□□□□□ -0.31
RUNX1-206ENST00000416754 DLC1Q96QB1 1528 aa13.11□□□□□ -0.31
RUNX1-206ENST00000416754 TULP4Q9NRJ4 1543 aa13.1□□□□□ -0.31
RUNX1-206ENST00000416754 PLSCR1O15162 318 aa13.1□□□□□ -0.31
RUNX1-206ENST00000416754 KDM2AQ9Y2K7 1162 aa13.1□□□□□ -0.31
RUNX1-206ENST00000416754 ZBTB7CA1YPR0 619 aa13.09□□□□□ -0.31
RUNX1-206ENST00000416754 ADGRB1O14514 1584 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms