RNA–Protein interactions for RNA: ENST00000416722.1

LINC00316-201, long intergenic non-protein coding RNA 316, humanhuman

TSL 2 BASIC

Gene LINC00316, Length 455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00316-201ENST00000416722 PHRF1Q9P1Y6 1649 aaKnown RBP12.48□□□□□ -0.41
LINC00316-201ENST00000416722 GLI3P10071 1580 aa12.47□□□□□ -0.41
LINC00316-201ENST00000416722 BCL9LQ86UU0 1499 aa12.47□□□□□ -0.41
LINC00316-201ENST00000416722 PLCB2Q00722 1185 aa12.47□□□□□ -0.41
LINC00316-201ENST00000416722 ZNF772Q68DY9 489 aaPredicted RBP12.47□□□□□ -0.41
LINC00316-201ENST00000416722 QTRT2Q9H974 415 aaKnown RBP12.47□□□□□ -0.41
LINC00316-201ENST00000416722 CABP2Q9NPB3 220 aa12.47□□□□□ -0.41
LINC00316-201ENST00000416722 NRAPQ86VF7 1730 aa12.47□□□□□ -0.41
LINC00316-201ENST00000416722 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.46□□□□□ -0.41
LINC00316-201ENST00000416722 NUDT16Q96DE0 195 aaKnown RBP12.46□□□□□ -0.41
LINC00316-201ENST00000416722 USP21Q9UK80 565 aa12.46□□□□□ -0.41
LINC00316-201ENST00000416722 ATRNO75882 1429 aa12.45□□□□□ -0.42
LINC00316-201ENST00000416722 RXRBP28702 533 aa12.45□□□□□ -0.42
LINC00316-201ENST00000416722 PSME1Q06323 249 aa12.45□□□□□ -0.42
LINC00316-201ENST00000416722 CENPJQ9HC77 1338 aaPredicted RBP12.44□□□□□ -0.42
LINC00316-201ENST00000416722 MYCNP04198 464 aaPredicted RBP12.44□□□□□ -0.42
LINC00316-201ENST00000416722 SBNO1A3KN83 1393 aa12.43□□□□□ -0.42
LINC00316-201ENST00000416722 ROCK2O75116 1388 aaKnown RBP12.43□□□□□ -0.42
LINC00316-201ENST00000416722 SLIT2O94813 1529 aa12.43□□□□□ -0.42
LINC00316-201ENST00000416722 PAK3O75914 559 aaPredicted RBP12.43□□□□□ -0.42
LINC00316-201ENST00000416722 NGDNQ8NEJ9 315 aaKnown RBP12.43□□□□□ -0.42
LINC00316-201ENST00000416722 FNBP4Q8N3X1 1017 aaPredicted RBP12.42□□□□□ -0.42
LINC00316-201ENST00000416722 AKAP12Q02952 1782 aa12.42□□□□□ -0.42
LINC00316-201ENST00000416722 ACEP12821 1306 aa12.41□□□□□ -0.42
LINC00316-201ENST00000416722 SRPK2P78362 688 aaKnown RBP12.41□□□□□ -0.42
LINC00316-201ENST00000416722 PPIP5K1Q6PFW1 1433 aa12.41□□□□□ -0.42
LINC00316-201ENST00000416722 NRKQ7Z2Y5 1582 aa12.41□□□□□ -0.42
LINC00316-201ENST00000416722 STAC3Q96MF2 364 aa12.41□□□□□ -0.42
LINC00316-201ENST00000416722 NWD2Q9ULI1 1742 aa12.41□□□□□ -0.42
LINC00316-201ENST00000416722 RALGAPBQ86X10 1494 aa12.4□□□□□ -0.42
LINC00316-201ENST00000416722 FAM83GA6ND36 823 aa12.4□□□□□ -0.42
LINC00316-201ENST00000416722 HAP1P54257 671 aaPredicted RBP12.4□□□□□ -0.42
LINC00316-201ENST00000416722 RBM6P78332 1123 aaKnown RBP12.4□□□□□ -0.42
LINC00316-201ENST00000416722 UPF1Q92900 1129 aaKnown RBP eCLIP12.4□□□□□ -0.42
LINC00316-201ENST00000416722 PIK3C2AO00443 1686 aa12.4□□□□□ -0.42
LINC00316-201ENST00000416722 RGPD5Q99666 1765 aa12.39□□□□□ -0.43
LINC00316-201ENST00000416722 CHRNA2Q15822 529 aa12.39□□□□□ -0.43
LINC00316-201ENST00000416722 PCGF6Q9BYE7 350 aa12.39□□□□□ -0.43
LINC00316-201ENST00000416722 EP400Q96L91 3159 aa12.39□□□□□ -0.43
LINC00316-201ENST00000416722 GPRASP1Q5JY77 1395 aa12.39□□□□□ -0.43
LINC00316-201ENST00000416722 TONSLQ96HA7 1378 aa12.39□□□□□ -0.43
LINC00316-201ENST00000416722 CDK12Q9NYV4 1490 aaPredicted RBP12.39□□□□□ -0.43
LINC00316-201ENST00000416722 COL14A1Q05707 1796 aaKnown RBP12.38□□□□□ -0.43
LINC00316-201ENST00000416722 TRPC5Q9UL62 973 aaPredicted RBP12.38□□□□□ -0.43
LINC00316-201ENST00000416722 POLR3AO14802 1390 aaPredicted RBP12.38□□□□□ -0.43
LINC00316-201ENST00000416722 ARHGEF10O15013 1369 aa12.38□□□□□ -0.43
LINC00316-201ENST00000416722 EIF3AQ14152 1382 aaKnown RBP12.38□□□□□ -0.43
LINC00316-201ENST00000416722 CABP1Q9NZU7 370 aa12.37□□□□□ -0.43
LINC00316-201ENST00000416722 ZC3H6P61129 1189 aaKnown RBP12.36□□□□□ -0.43
LINC00316-201ENST00000416722 UNC5CLQ8IV45 518 aa12.36□□□□□ -0.43
LINC00316-201ENST00000416722 CCDC61Q9Y6R9 512 aa12.36□□□□□ -0.43
LINC00316-201ENST00000416722 MON2Q7Z3U7 1717 aa12.36□□□□□ -0.43
LINC00316-201ENST00000416722 KIAA0232Q92628 1395 aa12.35□□□□□ -0.43
LINC00316-201ENST00000416722 PRKCSHP14314 528 aaPredicted RBP12.35□□□□□ -0.43
LINC00316-201ENST00000416722 GJD4Q96KN9 370 aaPredicted RBP12.35□□□□□ -0.43
LINC00316-201ENST00000416722 CARD11Q9BXL7 1154 aa12.35□□□□□ -0.43
LINC00316-201ENST00000416722 ZRANB1Q9UGI0 708 aa12.35□□□□□ -0.43
LINC00316-201ENST00000416722 PLEKHG3A1L390 1219 aa12.34□□□□□ -0.43
LINC00316-201ENST00000416722 BTG4Q9NY30 223 aa12.34□□□□□ -0.43
LINC00316-201ENST00000416722 CCDC9Q9Y3X0 531 aaKnown RBP12.34□□□□□ -0.43
LINC00316-201ENST00000416722 LMO7Q8WWI1 1683 aa12.34□□□□□ -0.43
LINC00316-201ENST00000416722 USP6P35125 1406 aa12.34□□□□□ -0.43
LINC00316-201ENST00000416722 ZBTB7CA1YPR0 619 aa12.33□□□□□ -0.44
LINC00316-201ENST00000416722 FAM182BQ5T319 152 aa12.33□□□□□ -0.44
LINC00316-201ENST00000416722 CD163L1Q9NR16 1453 aa12.33□□□□□ -0.44
LINC00316-201ENST00000416722 CAMTA1Q9Y6Y1 1673 aa12.32□□□□□ -0.44
LINC00316-201ENST00000416722 ABTB2Q8N961 1025 aa12.32□□□□□ -0.44
LINC00316-201ENST00000416722 COL18A1P39060 1754 aa12.32□□□□□ -0.44
LINC00316-201ENST00000416722 SSH2Q76I76 1423 aa12.31□□□□□ -0.44
LINC00316-201ENST00000416722 SOX12O15370 315 aa12.31□□□□□ -0.44
LINC00316-201ENST00000416722 PRDM11Q9NQV5 511 aa12.31□□□□□ -0.44
LINC00316-201ENST00000416722 STRN4Q9NRL3 753 aa12.31□□□□□ -0.44
LINC00316-201ENST00000416722 THSD7AQ9UPZ6 1657 aa12.31□□□□□ -0.44
LINC00316-201ENST00000416722 EVC2Q86UK5 1308 aa12.31□□□□□ -0.44
LINC00316-201ENST00000416722 VPS72Q15906 364 aa12.3□□□□□ -0.44
LINC00316-201ENST00000416722 FAM98CQ17RN3 349 aaKnown RBP12.3□□□□□ -0.44
LINC00316-201ENST00000416722 SEPT12Q8IYM1 358 aa12.3□□□□□ -0.44
LINC00316-201ENST00000416722 USP19O94966 1318 aa12.3□□□□□ -0.44
LINC00316-201ENST00000416722 SLIT3O75094 1523 aa12.29□□□□□ -0.44
LINC00316-201ENST00000416722 LTN1O94822 1766 aa12.28□□□□□ -0.44
LINC00316-201ENST00000416722 ST20-MTHFSA0A0A6YYL1 179 aa12.28□□□□□ -0.44
LINC00316-201ENST00000416722 A0A0G2JS52 829 aa12.28□□□□□ -0.44
LINC00316-201ENST00000416722 MYT1Q01538 1121 aa12.28□□□□□ -0.44
LINC00316-201ENST00000416722 TESK2Q96S53 571 aa12.28□□□□□ -0.44
LINC00316-201ENST00000416722 SLC12A5Q9H2X9 1139 aa12.28□□□□□ -0.44
LINC00316-201ENST00000416722 USP35Q9P2H5 1018 aa12.28□□□□□ -0.44
LINC00316-201ENST00000416722 WNK3Q9BYP7 1800 aa12.27□□□□□ -0.44
LINC00316-201ENST00000416722 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.27□□□□□ -0.45
LINC00316-201ENST00000416722 TTC21BQ7Z4L5 1316 aa12.27□□□□□ -0.45
LINC00316-201ENST00000416722 CPSF1Q10570 1443 aaKnown RBP12.27□□□□□ -0.45
LINC00316-201ENST00000416722 NFAT5O94916 1531 aa12.27□□□□□ -0.45
LINC00316-201ENST00000416722 MYOM1P52179 1685 aa12.26□□□□□ -0.45
LINC00316-201ENST00000416722 NLRP6P59044 892 aa12.26□□□□□ -0.45
LINC00316-201ENST00000416722 LARP1Q6PKG0 1096 aaKnown RBP12.26□□□□□ -0.45
LINC00316-201ENST00000416722 NME9Q86XW9 330 aa12.26□□□□□ -0.45
LINC00316-201ENST00000416722 TMC1Q8TDI8 760 aa12.26□□□□□ -0.45
LINC00316-201ENST00000416722 SPATA31A5Q5VU36 1347 aa12.26□□□□□ -0.45
LINC00316-201ENST00000416722 SPATA31A7Q8IWB4 1347 aa12.26□□□□□ -0.45
LINC00316-201ENST00000416722 ATAD2Q6PL18 1390 aa12.26□□□□□ -0.45
LINC00316-201ENST00000416722 TNS1Q9HBL0 1735 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms