RNA–Protein interactions for RNA: ENST00000416603.1

THUMPD3-202, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-202ENST00000416603 CLTCQ00610 1675 aaKnown RBP10.66□□□□□ -0.7
THUMPD3-202ENST00000416603 BCAMP50895 628 aa10.66□□□□□ -0.7
THUMPD3-202ENST00000416603 ATP7AQ04656 1500 aa10.66□□□□□ -0.7
THUMPD3-202ENST00000416603 INO80Q9ULG1 1556 aaPredicted RBP10.65□□□□□ -0.7
THUMPD3-202ENST00000416603 GPATCH8Q9UKJ3 1502 aaKnown RBP10.65□□□□□ -0.7
THUMPD3-202ENST00000416603 ADGBQ8N7X0 1667 aa10.64□□□□□ -0.71
THUMPD3-202ENST00000416603 SOWAHBA6NEL2 793 aa10.64□□□□□ -0.71
THUMPD3-202ENST00000416603 HIC1Q14526 733 aa10.64□□□□□ -0.71
THUMPD3-202ENST00000416603 GPIHBP1Q8IV16 184 aa10.64□□□□□ -0.71
THUMPD3-202ENST00000416603 LRCH3Q96II8 777 aa10.64□□□□□ -0.71
THUMPD3-202ENST00000416603 CNTLNQ9NXG0 1405 aa10.64□□□□□ -0.71
THUMPD3-202ENST00000416603 MTUS2Q5JR59 1369 aa10.64□□□□□ -0.71
THUMPD3-202ENST00000416603 CCNB3Q8WWL7 1395 aa10.64□□□□□ -0.71
THUMPD3-202ENST00000416603 SPAG9O60271 1321 aaKnown RBP10.63□□□□□ -0.71
THUMPD3-202ENST00000416603 PLEKHH2Q8IVE3 1493 aa10.63□□□□□ -0.71
THUMPD3-202ENST00000416603 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.63□□□□□ -0.71
THUMPD3-202ENST00000416603 TIAM1Q13009 1591 aa10.63□□□□□ -0.71
THUMPD3-202ENST00000416603 EHBP1L1Q8N3D4 1523 aa10.63□□□□□ -0.71
THUMPD3-202ENST00000416603 MYO3AQ8NEV4 1616 aa10.62□□□□□ -0.71
THUMPD3-202ENST00000416603 PLXNC1O60486 1568 aa10.62□□□□□ -0.71
THUMPD3-202ENST00000416603 GPR37O15354 613 aa10.62□□□□□ -0.71
THUMPD3-202ENST00000416603 HNRNPMP52272 730 aaKnown RBP eCLIP10.62□□□□□ -0.71
THUMPD3-202ENST00000416603 SAMD7Q7Z3H4 446 aa10.61□□□□□ -0.71
THUMPD3-202ENST00000416603 CFDP1Q9UEE9 299 aaPredicted RBP10.61□□□□□ -0.71
THUMPD3-202ENST00000416603 CAMSAP1Q5T5Y3 1602 aa10.61□□□□□ -0.71
THUMPD3-202ENST00000416603 A2MP01023 1474 aa10.61□□□□□ -0.71
THUMPD3-202ENST00000416603 ZNF142P52746 1687 aaPredicted RBP10.6□□□□□ -0.71
THUMPD3-202ENST00000416603 PTPRTO14522 1441 aa10.59□□□□□ -0.71
THUMPD3-202ENST00000416603 KIAA1107Q9UPP5 1409 aa10.59□□□□□ -0.71
THUMPD3-202ENST00000416603 GNPATO15228 680 aa10.59□□□□□ -0.71
THUMPD3-202ENST00000416603 EYA1Q99502 592 aa10.59□□□□□ -0.71
THUMPD3-202ENST00000416603 HPS5Q9UPZ3 1129 aa10.59□□□□□ -0.71
THUMPD3-202ENST00000416603 ADGRG1Q9Y653 693 aa10.59□□□□□ -0.71
THUMPD3-202ENST00000416603 NPATQ14207 1427 aa10.58□□□□□ -0.72
THUMPD3-202ENST00000416603 NCOA1Q15788 1441 aa10.58□□□□□ -0.72
THUMPD3-202ENST00000416603 FAM161AQ3B820 660 aa10.58□□□□□ -0.72
THUMPD3-202ENST00000416603 RBM46Q8TBY0 533 aaKnown RBP10.58□□□□□ -0.72
THUMPD3-202ENST00000416603 CEP170BQ9Y4F5 1589 aaPredicted RBP10.57□□□□□ -0.72
THUMPD3-202ENST00000416603 ZMYM3Q14202 1370 aa10.57□□□□□ -0.72
THUMPD3-202ENST00000416603 RNF40O75150 1001 aa10.57□□□□□ -0.72
THUMPD3-202ENST00000416603 HDGFP51858 240 aaKnown RBP10.57□□□□□ -0.72
THUMPD3-202ENST00000416603 WBP1LQ9NX94 342 aa10.57□□□□□ -0.72
THUMPD3-202ENST00000416603 TSR3Q9UJK0 312 aaKnown RBP10.57□□□□□ -0.72
THUMPD3-202ENST00000416603 CEP162Q5TB80 1403 aa10.57□□□□□ -0.72
THUMPD3-202ENST00000416603 FECHP22830 423 aa10.56□□□□□ -0.72
THUMPD3-202ENST00000416603 GGT6Q6P531 493 aa10.56□□□□□ -0.72
THUMPD3-202ENST00000416603 LTBP4Q8N2S1 1624 aa10.55□□□□□ -0.72
THUMPD3-202ENST00000416603 SWT1Q5T5J6 900 aaKnown RBP10.55□□□□□ -0.72
THUMPD3-202ENST00000416603 ZNF644Q9H582 1327 aaPredicted RBP10.55□□□□□ -0.72
THUMPD3-202ENST00000416603 POLR1AO95602 1720 aaPredicted RBP10.54□□□□□ -0.72
THUMPD3-202ENST00000416603 DNAJB2P25686 324 aa10.54□□□□□ -0.72
THUMPD3-202ENST00000416603 PLA2G2EQ9NZK7 142 aa10.54□□□□□ -0.72
THUMPD3-202ENST00000416603 CAMSAP2Q08AD1 1489 aa10.54□□□□□ -0.72
THUMPD3-202ENST00000416603 PTPRKQ15262 1439 aa10.53□□□□□ -0.72
THUMPD3-202ENST00000416603 PPP4CP60510 307 aa10.53□□□□□ -0.72
THUMPD3-202ENST00000416603 LMOD2Q6P5Q4 547 aa10.53□□□□□ -0.72
THUMPD3-202ENST00000416603 NYAP1Q6ZVC0 841 aa10.53□□□□□ -0.72
THUMPD3-202ENST00000416603 ERICH6Q7L0X2 663 aa10.53□□□□□ -0.72
THUMPD3-202ENST00000416603 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.53□□□□□ -0.72
THUMPD3-202ENST00000416603 NCOA2Q15596 1464 aa10.53□□□□□ -0.72
THUMPD3-202ENST00000416603 CCDC141Q6ZP82 1450 aa10.53□□□□□ -0.72
THUMPD3-202ENST00000416603 MBD5Q9P267 1494 aa10.53□□□□□ -0.72
THUMPD3-202ENST00000416603 SPATA31D1Q6ZQQ2 1576 aa10.52□□□□□ -0.72
THUMPD3-202ENST00000416603 IQSEC2Q5JU85 1478 aa10.52□□□□□ -0.73
THUMPD3-202ENST00000416603 DISP3Q9P2K9 1392 aa10.52□□□□□ -0.73
THUMPD3-202ENST00000416603 PLA2R1Q13018 1463 aa10.51□□□□□ -0.73
THUMPD3-202ENST00000416603 RCCD1A6NED2 376 aa10.51□□□□□ -0.73
THUMPD3-202ENST00000416603 OATP04181 439 aa10.51□□□□□ -0.73
THUMPD3-202ENST00000416603 SLF2Q8IX21 1173 aa10.51□□□□□ -0.73
THUMPD3-202ENST00000416603 PXYLP1Q8TE99 480 aa10.51□□□□□ -0.73
THUMPD3-202ENST00000416603 DNMT1P26358 1616 aaKnown RBP10.51□□□□□ -0.73
THUMPD3-202ENST00000416603 RTEL1-TNFRSF6BF6WH68 1400 aa10.5□□□□□ -0.73
THUMPD3-202ENST00000416603 KDM5DQ9BY66 1539 aa10.5□□□□□ -0.73
THUMPD3-202ENST00000416603 SLC4A3P48751 1232 aa10.5□□□□□ -0.73
THUMPD3-202ENST00000416603 A2ML1A8K2U0 1454 aa10.49□□□□□ -0.73
THUMPD3-202ENST00000416603 ARHGEF5Q12774 1597 aa10.49□□□□□ -0.73
THUMPD3-202ENST00000416603 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.49□□□□□ -0.73
THUMPD3-202ENST00000416603 METTL3Q86U44 580 aaKnown RBP10.49□□□□□ -0.73
THUMPD3-202ENST00000416603 TMEM134Q9H6X4 195 aa10.49□□□□□ -0.73
THUMPD3-202ENST00000416603 ZNF335Q9H4Z2 1342 aaPredicted RBP10.49□□□□□ -0.73
THUMPD3-202ENST00000416603 DHX29Q7Z478 1369 aaKnown RBP10.49□□□□□ -0.73
THUMPD3-202ENST00000416603 TCOF1Q13428 1488 aaKnown RBP10.49□□□□□ -0.73
THUMPD3-202ENST00000416603 FAM135AQ9P2D6 1515 aa10.48□□□□□ -0.73
THUMPD3-202ENST00000416603 KIF3BO15066 747 aa10.48□□□□□ -0.73
THUMPD3-202ENST00000416603 NECTIN2Q92692 538 aa10.47□□□□□ -0.73
THUMPD3-202ENST00000416603 GTF3C3Q9Y5Q9 886 aa10.47□□□□□ -0.73
THUMPD3-202ENST00000416603 ZC3H13Q5T200 1668 aaKnown RBP10.47□□□□□ -0.73
THUMPD3-202ENST00000416603 TNRQ92752 1358 aa10.46□□□□□ -0.74
THUMPD3-202ENST00000416603 PZPP20742 1482 aa10.46□□□□□ -0.74
THUMPD3-202ENST00000416603 NEURL4Q96JN8 1562 aa10.46□□□□□ -0.74
THUMPD3-202ENST00000416603 CEP152O94986 1710 aa10.46□□□□□ -0.74
THUMPD3-202ENST00000416603 CFAP65Q6ZU64 1925 aaKnown RBP10.45□□□□□ -0.74
THUMPD3-202ENST00000416603 RNF17Q9BXT8 1623 aaKnown RBP10.45□□□□□ -0.74
THUMPD3-202ENST00000416603 MAST1Q9Y2H9 1570 aa10.45□□□□□ -0.74
THUMPD3-202ENST00000416603 LRRC9Q6ZRR7 1453 aa10.45□□□□□ -0.74
THUMPD3-202ENST00000416603 VPS8Q8N3P4 1428 aa10.45□□□□□ -0.74
THUMPD3-202ENST00000416603 MAP2K5Q13163 448 aa10.45□□□□□ -0.74
THUMPD3-202ENST00000416603 EIF2AK4Q9P2K8 1649 aaKnown RBP10.44□□□□□ -0.74
THUMPD3-202ENST00000416603 WASHC2CQ9Y4E1 1318 aa10.44□□□□□ -0.74
THUMPD3-202ENST00000416603 UBAP1LF5GYI3 381 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms