RNA–Protein interactions for RNA: ENST00000416516.2

DCLK3-201, Transcript of doublecortin like kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene DCLK3, Length 5,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK3-201ENST00000416516 ZNF396Q96N95 335 aaPredicted RBP13.03□□□□□ -0.32
DCLK3-201ENST00000416516 MBD3O95983 291 aa13.02□□□□□ -0.32
DCLK3-201ENST00000416516 CUX1P39880 1505 aa13.02□□□□□ -0.32
DCLK3-201ENST00000416516 TRAK2O60296 914 aa13.02□□□□□ -0.33
DCLK3-201ENST00000416516 TMEM132AQ24JP5 1023 aa13.02□□□□□ -0.33
DCLK3-201ENST00000416516 MTERF4Q7Z6M4 381 aaKnown RBP13.02□□□□□ -0.33
DCLK3-201ENST00000416516 NACAP1Q9BZK3 213 aa13.02□□□□□ -0.33
DCLK3-201ENST00000416516 SCAPERQ9BY12 1400 aa13.02□□□□□ -0.33
DCLK3-201ENST00000416516 CALRP27797 417 aaKnown RBP13.02□□□□□ -0.33
DCLK3-201ENST00000416516 ERLIN2O94905 339 aa13.01□□□□□ -0.33
DCLK3-201ENST00000416516 FOXD4L6Q3SYB3 417 aaPredicted RBP13.01□□□□□ -0.33
DCLK3-201ENST00000416516 ZSCAN25Q6NSZ9 544 aa13.01□□□□□ -0.33
DCLK3-201ENST00000416516 FOXD4L3Q6VB84 417 aaPredicted RBP13.01□□□□□ -0.33
DCLK3-201ENST00000416516 DESP17661 470 aa13.01□□□□□ -0.33
DCLK3-201ENST00000416516 PRKCSHP14314 528 aaPredicted RBP13.01□□□□□ -0.33
DCLK3-201ENST00000416516 NLRP6P59044 892 aa13.01□□□□□ -0.33
DCLK3-201ENST00000416516 FAM69CQ0P6D2 419 aa13.01□□□□□ -0.33
DCLK3-201ENST00000416516 DNAI2Q9GZS0 605 aa13.01□□□□□ -0.33
DCLK3-201ENST00000416516 KLHL34Q8N239 644 aa13.01□□□□□ -0.33
DCLK3-201ENST00000416516 FSD1Q9BTV5 496 aa13.01□□□□□ -0.33
DCLK3-201ENST00000416516 ERICH3Q5RHP9 1530 aa13.01□□□□□ -0.33
DCLK3-201ENST00000416516 CCDC158Q5M9N0 1113 aa13□□□□□ -0.33
DCLK3-201ENST00000416516 DACH1Q9UI36 760 aa13□□□□□ -0.33
DCLK3-201ENST00000416516 PHF23Q9BUL5 403 aaPredicted RBP13□□□□□ -0.33
DCLK3-201ENST00000416516 TATP17735 454 aaPredicted RBP13□□□□□ -0.33
DCLK3-201ENST00000416516 ZNF771Q7L3S4 317 aaPredicted RBP13□□□□□ -0.33
DCLK3-201ENST00000416516 KINO60870 393 aaKnown RBP12.99□□□□□ -0.33
DCLK3-201ENST00000416516 ANKRD1Q15327 319 aa12.99□□□□□ -0.33
DCLK3-201ENST00000416516 ZNF644Q9H582 1327 aaPredicted RBP12.99□□□□□ -0.33
DCLK3-201ENST00000416516 STIM1Q13586 685 aa12.99□□□□□ -0.33
DCLK3-201ENST00000416516 NBPF8Q3BBV2 869 aa12.99□□□□□ -0.33
DCLK3-201ENST00000416516 ZNHIT6Q9NWK9 470 aaKnown RBP12.99□□□□□ -0.33
DCLK3-201ENST00000416516 FYCO1Q9BQS8 1478 aa12.99□□□□□ -0.33
DCLK3-201ENST00000416516 ZNF692Q9BU19 519 aaPredicted RBP12.99□□□□□ -0.33
DCLK3-201ENST00000416516 NCOA2Q15596 1464 aa12.99□□□□□ -0.33
DCLK3-201ENST00000416516 TRIM21P19474 475 aaKnown RBP12.98□□□□□ -0.33
DCLK3-201ENST00000416516 CAGE1Q8TC20 777 aa12.98□□□□□ -0.33
DCLK3-201ENST00000416516 LNPKQ9C0E8 428 aa12.98□□□□□ -0.33
DCLK3-201ENST00000416516 CASKIN1Q8WXD9 1431 aa12.98□□□□□ -0.33
DCLK3-201ENST00000416516 NASPP49321 788 aaPredicted RBP12.98□□□□□ -0.33
DCLK3-201ENST00000416516 KRT18P05783 430 aaKnown RBP12.98□□□□□ -0.33
DCLK3-201ENST00000416516 TRIM22Q8IYM9 498 aa12.98□□□□□ -0.33
DCLK3-201ENST00000416516 CWC15Q9P013 229 aaKnown RBP12.98□□□□□ -0.33
DCLK3-201ENST00000416516 CCDC39Q9UFE4 941 aa12.98□□□□□ -0.33
DCLK3-201ENST00000416516 CT47B1P0C2W7 299 aaPredicted RBP12.98□□□□□ -0.33
DCLK3-201ENST00000416516 IFT57Q9NWB7 429 aa12.98□□□□□ -0.33
DCLK3-201ENST00000416516 THEMISQ8N1K5 641 aaPredicted RBP12.97□□□□□ -0.33
DCLK3-201ENST00000416516 PATL2C9JE40 543 aaKnown RBP12.97□□□□□ -0.33
DCLK3-201ENST00000416516 WDHD1O75717 1129 aaPredicted RBP12.96□□□□□ -0.33
DCLK3-201ENST00000416516 MAP7D2Q96T17 732 aa12.96□□□□□ -0.33
DCLK3-201ENST00000416516 NECTIN2Q92692 538 aa12.96□□□□□ -0.33
DCLK3-201ENST00000416516 GCC1Q96CN9 775 aa12.96□□□□□ -0.33
DCLK3-201ENST00000416516 SAMD1Q6SPF0 538 aaPredicted RBP12.96□□□□□ -0.34
DCLK3-201ENST00000416516 AIMP1Q12904 312 aaKnown RBP12.96□□□□□ -0.34
DCLK3-201ENST00000416516 FYB1O15117 783 aa12.95□□□□□ -0.34
DCLK3-201ENST00000416516 SOGA3Q5TF21 947 aa12.95□□□□□ -0.34
DCLK3-201ENST00000416516 AEBP1Q8IUX7 1158 aa12.95□□□□□ -0.34
DCLK3-201ENST00000416516 BMP2KQ9NSY1 1161 aaPredicted RBP12.95□□□□□ -0.34
DCLK3-201ENST00000416516 SPG7Q9UQ90 795 aa12.95□□□□□ -0.34
DCLK3-201ENST00000416516 PROSER2Q86WR7 435 aaPredicted RBP12.95□□□□□ -0.34
DCLK3-201ENST00000416516 NOL7Q9UMY1 257 aaKnown RBP12.95□□□□□ -0.34
DCLK3-201ENST00000416516 FANCD2Q9BXW9 1451 aa12.95□□□□□ -0.34
DCLK3-201ENST00000416516 RABEP1Q15276 862 aa12.95□□□□□ -0.34
DCLK3-201ENST00000416516 HFM1A2PYH4 1435 aa12.95□□□□□ -0.34
DCLK3-201ENST00000416516 SYNJ1O43426 1573 aa12.95□□□□□ -0.34
DCLK3-201ENST00000416516 SURF6O75683 361 aaKnown RBP12.94□□□□□ -0.34
DCLK3-201ENST00000416516 FGD5Q6ZNL6 1462 aa12.94□□□□□ -0.34
DCLK3-201ENST00000416516 CDKL5O76039 1030 aa12.94□□□□□ -0.34
DCLK3-201ENST00000416516 CCT4P50991 539 aaKnown RBP12.94□□□□□ -0.34
DCLK3-201ENST00000416516 CCDC57Q2TAC2 916 aa12.94□□□□□ -0.34
DCLK3-201ENST00000416516 PDCL3Q9H2J4 239 aa12.94□□□□□ -0.34
DCLK3-201ENST00000416516 CNNM1Q9NRU3 951 aa12.94□□□□□ -0.34
DCLK3-201ENST00000416516 PDE3AQ14432 1141 aa12.94□□□□□ -0.34
DCLK3-201ENST00000416516 TTC39AQ5SRH9 613 aa12.93□□□□□ -0.34
DCLK3-201ENST00000416516 ABTB2Q8N961 1025 aa12.93□□□□□ -0.34
DCLK3-201ENST00000416516 PKNOX2Q96KN3 472 aa12.93□□□□□ -0.34
DCLK3-201ENST00000416516 PDZRN3Q9UPQ7 1066 aa12.93□□□□□ -0.34
DCLK3-201ENST00000416516 GNAI2P04899 355 aa12.93□□□□□ -0.34
DCLK3-201ENST00000416516 PDILTQ8N807 584 aa12.93□□□□□ -0.34
DCLK3-201ENST00000416516 SRCIN1Q9C0H9 1055 aa12.93□□□□□ -0.34
DCLK3-201ENST00000416516 CTNNA3Q9UI47 895 aa12.93□□□□□ -0.34
DCLK3-201ENST00000416516 PRXQ9BXM0 1461 aa12.93□□□□□ -0.34
DCLK3-201ENST00000416516 STK38Q15208 465 aa12.92□□□□□ -0.34
DCLK3-201ENST00000416516 EZRP15311 586 aaKnown RBP12.92□□□□□ -0.34
DCLK3-201ENST00000416516 ANKRD50Q9ULJ7 1429 aa12.92□□□□□ -0.34
DCLK3-201ENST00000416516 PPP2R1AP30153 589 aa12.92□□□□□ -0.34
DCLK3-201ENST00000416516 ZNF287Q9HBT7 754 aa12.92□□□□□ -0.34
DCLK3-201ENST00000416516 CAVIN1Q6NZI2 390 aaKnown RBP12.92□□□□□ -0.34
DCLK3-201ENST00000416516 BCAR3O75815 825 aa12.91□□□□□ -0.34
DCLK3-201ENST00000416516 HMGN5P82970 282 aaKnown RBP12.91□□□□□ -0.34
DCLK3-201ENST00000416516 TXNDC2Q86VQ3 553 aa12.91□□□□□ -0.34
DCLK3-201ENST00000416516 ZNF428Q96B54 188 aa12.91□□□□□ -0.34
DCLK3-201ENST00000416516 RBM42Q9BTD8 480 aaKnown RBP12.91□□□□□ -0.34
DCLK3-201ENST00000416516 GOLGA6L7A0A1B0GV03 622 aa12.91□□□□□ -0.34
DCLK3-201ENST00000416516 WASF1Q92558 559 aa12.91□□□□□ -0.34
DCLK3-201ENST00000416516 SLC52A1Q9NWF4 448 aa12.91□□□□□ -0.34
DCLK3-201ENST00000416516 TMOD2Q9NZR1 351 aa12.91□□□□□ -0.34
DCLK3-201ENST00000416516 GOLGA6L10A6NI86 522 aa12.9□□□□□ -0.34
DCLK3-201ENST00000416516 PLEKHH2Q8IVE3 1493 aa12.9□□□□□ -0.34
DCLK3-201ENST00000416516 SMC2O95347 1197 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms