RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 MINK1Q8N4C8 1332 aaPredicted RBP19.51■□□□□ 0.71
CTHRC1-202ENST00000415886 ACIN1Q9UKV3 1341 aaKnown RBP19.51■□□□□ 0.71
CTHRC1-202ENST00000415886 RGPD1P0DJD0 1748 aa19.51■□□□□ 0.71
CTHRC1-202ENST00000415886 HRCP23327 699 aa19.51■□□□□ 0.71
CTHRC1-202ENST00000415886 THSD7AQ9UPZ6 1657 aa19.5■□□□□ 0.71
CTHRC1-202ENST00000415886 EN1Q05925 392 aaPredicted RBP19.5■□□□□ 0.71
CTHRC1-202ENST00000415886 SPATA31A5Q5VU36 1347 aa19.5■□□□□ 0.71
CTHRC1-202ENST00000415886 SPATA31A7Q8IWB4 1347 aa19.5■□□□□ 0.71
CTHRC1-202ENST00000415886 EIF3AQ14152 1382 aaKnown RBP19.48■□□□□ 0.71
CTHRC1-202ENST00000415886 TNS1Q9HBL0 1735 aaKnown RBP19.48■□□□□ 0.71
CTHRC1-202ENST00000415886 WASLO00401 505 aaPredicted RBP19.46■□□□□ 0.71
CTHRC1-202ENST00000415886 PAK3O75914 559 aaPredicted RBP19.46■□□□□ 0.71
CTHRC1-202ENST00000415886 PRDM11Q9NQV5 511 aa19.46■□□□□ 0.71
CTHRC1-202ENST00000415886 NGDNQ8NEJ9 315 aaKnown RBP19.45■□□□□ 0.7
CTHRC1-202ENST00000415886 DISP2A7MBM2 1401 aa19.44■□□□□ 0.7
CTHRC1-202ENST00000415886 R3HDM1Q15032 1099 aaKnown RBP19.44■□□□□ 0.7
CTHRC1-202ENST00000415886 KDM2AQ9Y2K7 1162 aa19.44■□□□□ 0.7
CTHRC1-202ENST00000415886 PHRF1Q9P1Y6 1649 aaKnown RBP19.43■□□□□ 0.7
CTHRC1-202ENST00000415886 KIAA0232Q92628 1395 aa19.43■□□□□ 0.7
CTHRC1-202ENST00000415886 ATP7BP35670 1465 aa19.42■□□□□ 0.7
CTHRC1-202ENST00000415886 EZH2Q15910 746 aaKnown RBP19.42■□□□□ 0.7
CTHRC1-202ENST00000415886 RAB3GAP2Q9H2M9 1393 aa19.42■□□□□ 0.7
CTHRC1-202ENST00000415886 ITSN1Q15811 1721 aa19.42■□□□□ 0.7
CTHRC1-202ENST00000415886 CHRNA2Q15822 529 aa19.41■□□□□ 0.7
CTHRC1-202ENST00000415886 DCAF11Q8TEB1 546 aa19.41■□□□□ 0.7
CTHRC1-202ENST00000415886 ARHGEF28Q8N1W1 1705 aaKnown RBP19.41■□□□□ 0.7
CTHRC1-202ENST00000415886 SPATA31A1Q5TZJ5 1347 aa19.41■□□□□ 0.7
CTHRC1-202ENST00000415886 STRN4Q9NRL3 753 aa19.4■□□□□ 0.7
CTHRC1-202ENST00000415886 TRIM37O94972 964 aa19.38■□□□□ 0.69
CTHRC1-202ENST00000415886 NUDT16Q96DE0 195 aaKnown RBP19.38■□□□□ 0.69
CTHRC1-202ENST00000415886 ZC3H6P61129 1189 aaKnown RBP19.37■□□□□ 0.69
CTHRC1-202ENST00000415886 NUTM2GQ5VZR2 741 aa19.37■□□□□ 0.69
CTHRC1-202ENST00000415886 CAMKK2Q96RR4 588 aa19.37■□□□□ 0.69
CTHRC1-202ENST00000415886 FAM196AQ6ZSG2 479 aa19.36■□□□□ 0.69
CTHRC1-202ENST00000415886 USP35Q9P2H5 1018 aa19.35■□□□□ 0.69
CTHRC1-202ENST00000415886 TOPAZ1Q8N9V7 1692 aa19.35■□□□□ 0.69
CTHRC1-202ENST00000415886 NRKQ7Z2Y5 1582 aa19.34■□□□□ 0.69
CTHRC1-202ENST00000415886 SSH2Q76I76 1423 aa19.34■□□□□ 0.69
CTHRC1-202ENST00000415886 APBA3O96018 575 aa19.33■□□□□ 0.68
CTHRC1-202ENST00000415886 RREB1Q92766 1687 aa19.33■□□□□ 0.68
CTHRC1-202ENST00000415886 POLR3AO14802 1390 aaPredicted RBP19.32■□□□□ 0.68
CTHRC1-202ENST00000415886 CDK19Q9BWU1 502 aa19.32■□□□□ 0.68
CTHRC1-202ENST00000415886 NUP188Q5SRE5 1749 aa19.31■□□□□ 0.68
CTHRC1-202ENST00000415886 ACEP12821 1306 aa19.31■□□□□ 0.68
CTHRC1-202ENST00000415886 CAMTA1Q9Y6Y1 1673 aa19.31■□□□□ 0.68
CTHRC1-202ENST00000415886 PARD3Q8TEW0 1356 aa19.31■□□□□ 0.68
CTHRC1-202ENST00000415886 EVA1CP58658 441 aa19.3■□□□□ 0.68
CTHRC1-202ENST00000415886 BARGINQ6ZT62 677 aa19.3■□□□□ 0.68
CTHRC1-202ENST00000415886 STAC3Q96MF2 364 aa19.3■□□□□ 0.68
CTHRC1-202ENST00000415886 LMO7Q8WWI1 1683 aa19.3■□□□□ 0.68
CTHRC1-202ENST00000415886 PDE3BQ13370 1112 aa19.29■□□□□ 0.68
CTHRC1-202ENST00000415886 NBPF8Q3BBV2 869 aa19.29■□□□□ 0.68
CTHRC1-202ENST00000415886 LARP1Q6PKG0 1096 aaKnown RBP19.29■□□□□ 0.68
CTHRC1-202ENST00000415886 ABTB2Q8N961 1025 aa19.27■□□□□ 0.68
CTHRC1-202ENST00000415886 CCDC61Q9Y6R9 512 aa19.27■□□□□ 0.68
CTHRC1-202ENST00000415886 USP19O94966 1318 aa19.26■□□□□ 0.67
CTHRC1-202ENST00000415886 TCP11L2Q8N4U5 519 aa19.26■□□□□ 0.67
CTHRC1-202ENST00000415886 CPDO75976 1380 aa19.26■□□□□ 0.67
CTHRC1-202ENST00000415886 PLEKHG3A1L390 1219 aa19.25■□□□□ 0.67
CTHRC1-202ENST00000415886 COL5A2P05997 1499 aaPredicted RBP19.23■□□□□ 0.67
CTHRC1-202ENST00000415886 PARP4Q9UKK3 1724 aaKnown RBP19.23■□□□□ 0.67
CTHRC1-202ENST00000415886 NBPF14Q5TI25 921 aa19.22■□□□□ 0.67
CTHRC1-202ENST00000415886 KIAA1210Q9ULL0 1709 aa19.22■□□□□ 0.67
CTHRC1-202ENST00000415886 PPIP5K1Q6PFW1 1433 aa19.21■□□□□ 0.67
CTHRC1-202ENST00000415886 THRAP3Q9Y2W1 955 aaKnown RBP19.21■□□□□ 0.67
CTHRC1-202ENST00000415886 GCP02774 474 aa19.2■□□□□ 0.66
CTHRC1-202ENST00000415886 NLRP13Q86W25 1043 aa19.2■□□□□ 0.66
CTHRC1-202ENST00000415886 PEAK1Q9H792 1746 aa19.19■□□□□ 0.66
CTHRC1-202ENST00000415886 CRB1P82279 1406 aa19.18■□□□□ 0.66
CTHRC1-202ENST00000415886 ZBTB7CA1YPR0 619 aa19.18■□□□□ 0.66
CTHRC1-202ENST00000415886 SRPK2P78362 688 aaKnown RBP19.18■□□□□ 0.66
CTHRC1-202ENST00000415886 NBPF1Q3BBV0 1214 aa19.18■□□□□ 0.66
CTHRC1-202ENST00000415886 LRRC37A3O60309 1634 aa19.18■□□□□ 0.66
CTHRC1-202ENST00000415886 YY1P25490 414 aa19.17■□□□□ 0.66
CTHRC1-202ENST00000415886 CABP2Q9NPB3 220 aa19.17■□□□□ 0.66
CTHRC1-202ENST00000415886 OVOS2A0A0G2JMS6 1433 aa19.17■□□□□ 0.66
CTHRC1-202ENST00000415886 OVOS2A0A0J9YW53 1432 aa19.17■□□□□ 0.66
CTHRC1-202ENST00000415886 OVOS2Q6IE36 1432 aa19.17■□□□□ 0.66
CTHRC1-202ENST00000415886 SPON1Q9HCB6 807 aa19.16■□□□□ 0.66
CTHRC1-202ENST00000415886 PPP1R1BQ9UD71 204 aaPredicted RBP19.16■□□□□ 0.66
CTHRC1-202ENST00000415886 KCNQ2O43526 872 aa19.15■□□□□ 0.66
CTHRC1-202ENST00000415886 SLIT3O75094 1523 aa19.15■□□□□ 0.66
CTHRC1-202ENST00000415886 CENPJQ9HC77 1338 aaPredicted RBP19.14■□□□□ 0.65
CTHRC1-202ENST00000415886 USP6P35125 1406 aa19.14■□□□□ 0.65
CTHRC1-202ENST00000415886 QRICH2Q9H0J4 1663 aa19.14■□□□□ 0.65
CTHRC1-202ENST00000415886 RGPD3A6NKT7 1758 aaPredicted RBP19.14■□□□□ 0.65
CTHRC1-202ENST00000415886 RGPD4Q7Z3J3 1758 aa19.14■□□□□ 0.65
CTHRC1-202ENST00000415886 BRD4O60885 1362 aaPredicted RBP19.13■□□□□ 0.65
CTHRC1-202ENST00000415886 SBF2Q86WG5 1849 aa19.13■□□□□ 0.65
CTHRC1-202ENST00000415886 AATKQ6ZMQ8 1374 aa19.12■□□□□ 0.65
CTHRC1-202ENST00000415886 C11orf95C9JLR9 678 aaPredicted RBP19.12■□□□□ 0.65
CTHRC1-202ENST00000415886 NLRP6P59044 892 aa19.12■□□□□ 0.65
CTHRC1-202ENST00000415886 ANO8Q9HCE9 1232 aaPredicted RBP19.12■□□□□ 0.65
CTHRC1-202ENST00000415886 WNK3Q9BYP7 1800 aa19.11■□□□□ 0.65
CTHRC1-202ENST00000415886 PIK3C2AO00443 1686 aa19.11■□□□□ 0.65
CTHRC1-202ENST00000415886 NINLQ9Y2I6 1382 aa19.11■□□□□ 0.65
CTHRC1-202ENST00000415886 DDB1Q16531 1140 aa19.11■□□□□ 0.65
CTHRC1-202ENST00000415886 PTF1AQ7RTS3 328 aa19.11■□□□□ 0.65
CTHRC1-202ENST00000415886 CABP1Q9NZU7 370 aa19.11■□□□□ 0.65
CTHRC1-202ENST00000415886 COL18A1P39060 1754 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms