RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 WDR97A6NE52 1622 aa9.9□□□□□ -0.82
CSTF1-202ENST00000415828 TRAF7Q6Q0C0 670 aa9.9□□□□□ -0.82
CSTF1-202ENST00000415828 SYMPKQ92797 1274 aaKnown RBP9.89□□□□□ -0.83
CSTF1-202ENST00000415828 GRIN2BQ13224 1484 aa9.88□□□□□ -0.83
CSTF1-202ENST00000415828 TNFRSF10AO00220 468 aa9.88□□□□□ -0.83
CSTF1-202ENST00000415828 RPIAP49247 311 aa9.88□□□□□ -0.83
CSTF1-202ENST00000415828 SPIRE2Q8WWL2 714 aa9.88□□□□□ -0.83
CSTF1-202ENST00000415828 GDF9O60383 454 aa9.87□□□□□ -0.83
CSTF1-202ENST00000415828 MMP16P51512 607 aa9.87□□□□□ -0.83
CSTF1-202ENST00000415828 PRR20EP86478 221 aa9.87□□□□□ -0.83
CSTF1-202ENST00000415828 PRR20CP86479 221 aa9.87□□□□□ -0.83
CSTF1-202ENST00000415828 PRR20DP86480 221 aa9.87□□□□□ -0.83
CSTF1-202ENST00000415828 PRR20BP86481 221 aa9.87□□□□□ -0.83
CSTF1-202ENST00000415828 PRR20AP86496 221 aa9.87□□□□□ -0.83
CSTF1-202ENST00000415828 GPBP1L1Q9HC44 474 aaPredicted RBP9.87□□□□□ -0.83
CSTF1-202ENST00000415828 SOGA1O94964 1423 aa9.86□□□□□ -0.83
CSTF1-202ENST00000415828 CD2BP2O95400 341 aaKnown RBP9.86□□□□□ -0.83
CSTF1-202ENST00000415828 FDX1P10109 184 aa9.86□□□□□ -0.83
CSTF1-202ENST00000415828 FOXC1Q12948 553 aa9.86□□□□□ -0.83
CSTF1-202ENST00000415828 NEUROD2Q15784 382 aa9.86□□□□□ -0.83
CSTF1-202ENST00000415828 PCDHGC3Q9UN70 934 aa9.86□□□□□ -0.83
CSTF1-202ENST00000415828 ZBTB24O43167 697 aaPredicted RBP9.85□□□□□ -0.83
CSTF1-202ENST00000415828 DXOO77932 396 aaKnown RBP9.85□□□□□ -0.83
CSTF1-202ENST00000415828 NDUFV2P19404 249 aa9.85□□□□□ -0.83
CSTF1-202ENST00000415828 BEGAINQ9BUH8 593 aa9.85□□□□□ -0.83
CSTF1-202ENST00000415828 PKD2L1Q9P0L9 805 aa9.84□□□□□ -0.83
CSTF1-202ENST00000415828 PTPRMP28827 1452 aa9.84□□□□□ -0.83
CSTF1-202ENST00000415828 ADAMTSL3P82987 1691 aa9.83□□□□□ -0.84
CSTF1-202ENST00000415828 MOXD2PA6NHM9 499 aa9.83□□□□□ -0.84
CSTF1-202ENST00000415828 C6orf229H3BNL8 230 aa9.83□□□□□ -0.84
CSTF1-202ENST00000415828 MS4A1P11836 297 aa9.83□□□□□ -0.84
CSTF1-202ENST00000415828 CCDC24Q8N4L8 307 aa9.83□□□□□ -0.84
CSTF1-202ENST00000415828 HSPA2P54652 639 aa9.82□□□□□ -0.84
CSTF1-202ENST00000415828 PKDCCQ504Y2 493 aa9.82□□□□□ -0.84
CSTF1-202ENST00000415828 KDM4CQ9H3R0 1056 aa9.82□□□□□ -0.84
CSTF1-202ENST00000415828 RETREG3Q86VR2 466 aa9.81□□□□□ -0.84
CSTF1-202ENST00000415828 GRIN2AQ12879 1464 aa9.8□□□□□ -0.84
CSTF1-202ENST00000415828 FAM187AA6NFU0 413 aa9.8□□□□□ -0.84
CSTF1-202ENST00000415828 JUNDP17535 347 aa9.8□□□□□ -0.84
CSTF1-202ENST00000415828 TBC1D2Q9BYX2 928 aa9.8□□□□□ -0.84
CSTF1-202ENST00000415828 SRCAPQ6ZRS2 3230 aa9.8□□□□□ -0.84
CSTF1-202ENST00000415828 DGAT1O75907 488 aa9.79□□□□□ -0.84
CSTF1-202ENST00000415828 TRIM32Q13049 653 aa9.79□□□□□ -0.84
CSTF1-202ENST00000415828 NUP160Q12769 1436 aa9.79□□□□□ -0.84
CSTF1-202ENST00000415828 MAP3K4Q9Y6R4 1608 aa9.78□□□□□ -0.84
CSTF1-202ENST00000415828 BRPF1P55201 1214 aaPredicted RBP9.78□□□□□ -0.84
CSTF1-202ENST00000415828 PRG4Q92954 1404 aaPredicted RBP9.78□□□□□ -0.84
CSTF1-202ENST00000415828 FGD5Q6ZNL6 1462 aa9.78□□□□□ -0.84
CSTF1-202ENST00000415828 TOP2AP11388 1531 aaKnown RBP9.77□□□□□ -0.84
CSTF1-202ENST00000415828 MED1Q15648 1581 aaPredicted RBP9.77□□□□□ -0.85
CSTF1-202ENST00000415828 GLI2P10070 1586 aa9.76□□□□□ -0.85
CSTF1-202ENST00000415828 MADDQ8WXG6 1647 aa9.76□□□□□ -0.85
CSTF1-202ENST00000415828 MYT1Q01538 1121 aa9.76□□□□□ -0.85
CSTF1-202ENST00000415828 NUDT12Q9BQG2 462 aa9.76□□□□□ -0.85
CSTF1-202ENST00000415828 CUL7Q14999 1698 aa9.75□□□□□ -0.85
CSTF1-202ENST00000415828 MTMR2Q13614 643 aa9.75□□□□□ -0.85
CSTF1-202ENST00000415828 DIXDC1Q155Q3 683 aa9.75□□□□□ -0.85
CSTF1-202ENST00000415828 RSBN1LQ6PCB5 846 aaPredicted RBP9.75□□□□□ -0.85
CSTF1-202ENST00000415828 CYP4X1Q8N118 509 aa9.75□□□□□ -0.85
CSTF1-202ENST00000415828 TOR4AQ9NXH8 423 aa9.75□□□□□ -0.85
CSTF1-202ENST00000415828 STRCQ7RTU9 1775 aa9.75□□□□□ -0.85
CSTF1-202ENST00000415828 ABCA5Q8WWZ7 1642 aa9.74□□□□□ -0.85
CSTF1-202ENST00000415828 PRR7Q8TB68 274 aa9.74□□□□□ -0.85
CSTF1-202ENST00000415828 FAM117AQ9C073 453 aa9.74□□□□□ -0.85
CSTF1-202ENST00000415828 PCDHB15Q9Y5E8 787 aa9.74□□□□□ -0.85
CSTF1-202ENST00000415828 RIMS1Q86UR5 1692 aaKnown RBP9.74□□□□□ -0.85
CSTF1-202ENST00000415828 ADAMTS12P58397 1594 aa9.73□□□□□ -0.85
CSTF1-202ENST00000415828 WNT7AO00755 349 aa9.73□□□□□ -0.85
CSTF1-202ENST00000415828 PTCRAQ6ISU1 281 aaPredicted RBP9.73□□□□□ -0.85
CSTF1-202ENST00000415828 GJA5P36382 358 aa9.72□□□□□ -0.85
CSTF1-202ENST00000415828 RIC3Q7Z5B4 369 aa9.72□□□□□ -0.85
CSTF1-202ENST00000415828 MRGPRX2Q96LB1 330 aa9.72□□□□□ -0.85
CSTF1-202ENST00000415828 BCORL1Q5H9F3 1711 aa9.71□□□□□ -0.85
CSTF1-202ENST00000415828 TTC24A2A3L6 582 aaPredicted RBP9.71□□□□□ -0.86
CSTF1-202ENST00000415828 SPDYE5A6NIY4 337 aa9.71□□□□□ -0.86
CSTF1-202ENST00000415828 SPTLC1O15269 473 aa9.71□□□□□ -0.86
CSTF1-202ENST00000415828 CCNYL3P0C7X3 344 aa9.71□□□□□ -0.86
CSTF1-202ENST00000415828 DDRGK1Q96HY6 314 aa9.71□□□□□ -0.86
CSTF1-202ENST00000415828 SKOR1P84550 965 aa9.7□□□□□ -0.86
CSTF1-202ENST00000415828 CSPP1Q1MSJ5 1256 aa9.7□□□□□ -0.86
CSTF1-202ENST00000415828 ZNF787Q6DD87 383 aa9.7□□□□□ -0.86
CSTF1-202ENST00000415828 IL27Q8NEV9 243 aa9.7□□□□□ -0.86
CSTF1-202ENST00000415828 CCDC88BA6NC98 1476 aa9.69□□□□□ -0.86
CSTF1-202ENST00000415828 ST8SIA5O15466 376 aa9.69□□□□□ -0.86
CSTF1-202ENST00000415828 PTPRNQ16849 979 aa9.69□□□□□ -0.86
CSTF1-202ENST00000415828 RC3H1Q5TC82 1133 aaKnown RBP9.69□□□□□ -0.86
CSTF1-202ENST00000415828 ATP1B4Q9UN42 357 aaPredicted RBP9.69□□□□□ -0.86
CSTF1-202ENST00000415828 HRCP23327 699 aa9.68□□□□□ -0.86
CSTF1-202ENST00000415828 WNT7BP56706 349 aa9.68□□□□□ -0.86
CSTF1-202ENST00000415828 MYSM1Q5VVJ2 828 aa9.68□□□□□ -0.86
CSTF1-202ENST00000415828 SNIP1Q8TAD8 396 aaKnown RBP9.68□□□□□ -0.86
CSTF1-202ENST00000415828 CABLES1Q8TDN4 633 aa9.68□□□□□ -0.86
CSTF1-202ENST00000415828 ZBTB3Q9H5J0 574 aa9.68□□□□□ -0.86
CSTF1-202ENST00000415828 LIMD1Q9UGP4 676 aa9.68□□□□□ -0.86
CSTF1-202ENST00000415828 PLEKHG3A1L390 1219 aa9.67□□□□□ -0.86
CSTF1-202ENST00000415828 CFAP99D6REC4 459 aa9.67□□□□□ -0.86
CSTF1-202ENST00000415828 DESI1Q6ICB0 168 aa9.67□□□□□ -0.86
CSTF1-202ENST00000415828 AAASQ9NRG9 546 aa9.67□□□□□ -0.86
CSTF1-202ENST00000415828 EVA1BQ9NVM1 165 aa9.67□□□□□ -0.86
CSTF1-202ENST00000415828 ASXL2Q76L83 1435 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms