RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 PRAM1Q96QH2 718 aa17.71■□□□□ 0.43
SSR4P1-201ENST00000415143 TULP4Q9NRJ4 1543 aa17.71■□□□□ 0.43
SSR4P1-201ENST00000415143 NCBP3Q53F19 620 aaKnown RBP17.7■□□□□ 0.42
SSR4P1-201ENST00000415143 RBM6P78332 1123 aaKnown RBP17.69■□□□□ 0.42
SSR4P1-201ENST00000415143 B4GALNT3Q6L9W6 998 aa17.69■□□□□ 0.42
SSR4P1-201ENST00000415143 SIRT1Q96EB6 747 aa17.69■□□□□ 0.42
SSR4P1-201ENST00000415143 CABP2Q9NPB3 220 aa17.69■□□□□ 0.42
SSR4P1-201ENST00000415143 ABCC11Q96J66 1382 aa17.68■□□□□ 0.42
SSR4P1-201ENST00000415143 CHD2O14647 1828 aaKnown RBP17.68■□□□□ 0.42
SSR4P1-201ENST00000415143 DIP2AQ14689 1571 aa17.68■□□□□ 0.42
SSR4P1-201ENST00000415143 QTRT2Q9H974 415 aaKnown RBP17.68■□□□□ 0.42
SSR4P1-201ENST00000415143 E9PSI1 815 aa17.67■□□□□ 0.42
SSR4P1-201ENST00000415143 C14orf37Q86TY3 774 aa17.67■□□□□ 0.42
SSR4P1-201ENST00000415143 ZNF521Q96K83 1311 aa17.67■□□□□ 0.42
SSR4P1-201ENST00000415143 CDCA7LQ96GN5 454 aa17.66■□□□□ 0.42
SSR4P1-201ENST00000415143 PLEKHG1Q9ULL1 1385 aa17.66■□□□□ 0.42
SSR4P1-201ENST00000415143 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.65■□□□□ 0.42
SSR4P1-201ENST00000415143 SENP3-EIF4A1A0A087X0R7 540 aa17.65■□□□□ 0.42
SSR4P1-201ENST00000415143 SAFB2Q14151 953 aaKnown RBP eCLIP17.65■□□□□ 0.42
SSR4P1-201ENST00000415143 RUNDC1Q96C34 613 aa17.65■□□□□ 0.42
SSR4P1-201ENST00000415143 C8orf37Q96NL8 207 aa17.65■□□□□ 0.42
SSR4P1-201ENST00000415143 MINK1Q8N4C8 1332 aaPredicted RBP17.65■□□□□ 0.42
SSR4P1-201ENST00000415143 SLFN5Q08AF3 891 aa17.64■□□□□ 0.41
SSR4P1-201ENST00000415143 CDK19Q9BWU1 502 aa17.64■□□□□ 0.41
SSR4P1-201ENST00000415143 PNNQ9H307 717 aaKnown RBP17.64■□□□□ 0.41
SSR4P1-201ENST00000415143 APAF1O14727 1248 aa17.63■□□□□ 0.41
SSR4P1-201ENST00000415143 RBM19Q9Y4C8 960 aaKnown RBP17.63■□□□□ 0.41
SSR4P1-201ENST00000415143 PLEKHH1Q9ULM0 1364 aa17.62■□□□□ 0.41
SSR4P1-201ENST00000415143 ATF3P18847 181 aa17.61■□□□□ 0.41
SSR4P1-201ENST00000415143 MTHFSP49914 203 aa17.61■□□□□ 0.41
SSR4P1-201ENST00000415143 DUSP27Q5VZP5 1158 aa17.61■□□□□ 0.41
SSR4P1-201ENST00000415143 CADPS2Q86UW7 1296 aa17.61■□□□□ 0.41
SSR4P1-201ENST00000415143 CCDC146Q8IYE0 955 aa17.61■□□□□ 0.41
SSR4P1-201ENST00000415143 TRMT2AQ8IZ69 625 aaKnown RBP17.6■□□□□ 0.41
SSR4P1-201ENST00000415143 A0A1W2PP64 1363 aa17.6■□□□□ 0.41
SSR4P1-201ENST00000415143 NCOA3Q9Y6Q9 1424 aa17.59■□□□□ 0.41
SSR4P1-201ENST00000415143 BRINP3Q76B58 766 aa17.59■□□□□ 0.41
SSR4P1-201ENST00000415143 NGLY1Q96IV0 654 aa17.59■□□□□ 0.41
SSR4P1-201ENST00000415143 EP400Q96L91 3159 aa17.59■□□□□ 0.41
SSR4P1-201ENST00000415143 NRXN3Q9Y4C0 1643 aa17.58■□□□□ 0.41
SSR4P1-201ENST00000415143 ATP7BP35670 1465 aa17.58■□□□□ 0.41
SSR4P1-201ENST00000415143 ADAMTS13Q76LX8 1427 aa17.58■□□□□ 0.41
SSR4P1-201ENST00000415143 TNNT2P45379 298 aaPredicted RBP17.58■□□□□ 0.4
SSR4P1-201ENST00000415143 CCDC27Q2M243 656 aa17.58■□□□□ 0.4
SSR4P1-201ENST00000415143 WDR63Q8IWG1 891 aa17.58■□□□□ 0.4
SSR4P1-201ENST00000415143 TBX22Q9Y458 520 aa17.57■□□□□ 0.4
SSR4P1-201ENST00000415143 EXOC6Q8TAG9 804 aa17.56■□□□□ 0.4
SSR4P1-201ENST00000415143 C19orf44Q9H6X5 657 aa17.56■□□□□ 0.4
SSR4P1-201ENST00000415143 TECPR2O15040 1411 aa17.55■□□□□ 0.4
SSR4P1-201ENST00000415143 WASLO00401 505 aaPredicted RBP17.55■□□□□ 0.4
SSR4P1-201ENST00000415143 MYT1Q01538 1121 aa17.54■□□□□ 0.4
SSR4P1-201ENST00000415143 CABP1Q9NZU7 370 aa17.54■□□□□ 0.4
SSR4P1-201ENST00000415143 FYB1O15117 783 aa17.53■□□□□ 0.4
SSR4P1-201ENST00000415143 U2AF1L5P0DN76 240 aaPredicted RBP17.53■□□□□ 0.4
SSR4P1-201ENST00000415143 U2AF1Q01081 240 aaKnown RBP eCLIP17.53■□□□□ 0.4
SSR4P1-201ENST00000415143 WWC1Q8IX03 1113 aa17.53■□□□□ 0.4
SSR4P1-201ENST00000415143 ZNF692Q9BU19 519 aaPredicted RBP17.53■□□□□ 0.4
SSR4P1-201ENST00000415143 NHSL1Q5SYE7 1610 aa17.53■□□□□ 0.4
SSR4P1-201ENST00000415143 PIK3R4Q99570 1358 aa17.53■□□□□ 0.4
SSR4P1-201ENST00000415143 KNDC1Q76NI1 1749 aa17.52■□□□□ 0.4
SSR4P1-201ENST00000415143 ANKRD26Q9UPS8 1709 aa17.52■□□□□ 0.4
SSR4P1-201ENST00000415143 FANCIQ9NVI1 1328 aa17.52■□□□□ 0.4
SSR4P1-201ENST00000415143 ADAMTS2O95450 1211 aa17.52■□□□□ 0.4
SSR4P1-201ENST00000415143 NEFMP07197 916 aa17.52■□□□□ 0.4
SSR4P1-201ENST00000415143 TCP11L2Q8N4U5 519 aa17.52■□□□□ 0.4
SSR4P1-201ENST00000415143 MYH16Q9H6N6 1097 aa17.52■□□□□ 0.4
SSR4P1-201ENST00000415143 TCERG1O14776 1098 aaKnown RBP17.51■□□□□ 0.39
SSR4P1-201ENST00000415143 WAPLQ7Z5K2 1190 aa17.51■□□□□ 0.39
SSR4P1-201ENST00000415143 LRRC59Q96AG4 307 aaKnown RBP17.51■□□□□ 0.39
SSR4P1-201ENST00000415143 GGNBP2Q9H3C7 697 aa17.51■□□□□ 0.39
SSR4P1-201ENST00000415143 PNPLA6Q8IY17 1366 aa17.51■□□□□ 0.39
SSR4P1-201ENST00000415143 LRP5O75197 1615 aa17.5■□□□□ 0.39
SSR4P1-201ENST00000415143 CD163L1Q9NR16 1453 aa17.5■□□□□ 0.39
SSR4P1-201ENST00000415143 MAPK8IP3Q9UPT6 1336 aa17.49■□□□□ 0.39
SSR4P1-201ENST00000415143 EDC4Q6P2E9 1401 aaKnown RBP17.49■□□□□ 0.39
SSR4P1-201ENST00000415143 DIAPH1O60610 1272 aaKnown RBP17.49■□□□□ 0.39
SSR4P1-201ENST00000415143 CT47B1P0C2W7 299 aaPredicted RBP17.49■□□□□ 0.39
SSR4P1-201ENST00000415143 AAMPQ13685 434 aa17.49■□□□□ 0.39
SSR4P1-201ENST00000415143 CCDC125Q86Z20 511 aa17.49■□□□□ 0.39
SSR4P1-201ENST00000415143 CCDC61Q9Y6R9 512 aa17.49■□□□□ 0.39
SSR4P1-201ENST00000415143 METP08581 1390 aa17.49■□□□□ 0.39
SSR4P1-201ENST00000415143 CRBNQ96SW2 442 aa17.48■□□□□ 0.39
SSR4P1-201ENST00000415143 USP21Q9UK80 565 aa17.48■□□□□ 0.39
SSR4P1-201ENST00000415143 DDX17Q92841 729 aaKnown RBP17.47■□□□□ 0.39
SSR4P1-201ENST00000415143 NUDT16Q96DE0 195 aaKnown RBP17.47■□□□□ 0.39
SSR4P1-201ENST00000415143 TRPC5Q9UL62 973 aaPredicted RBP17.47■□□□□ 0.39
SSR4P1-201ENST00000415143 XRN1Q8IZH2 1706 aaKnown RBP17.47■□□□□ 0.39
SSR4P1-201ENST00000415143 PTPRUQ92729 1446 aa17.47■□□□□ 0.39
SSR4P1-201ENST00000415143 U2SURPO15042 1029 aaKnown RBP17.46■□□□□ 0.39
SSR4P1-201ENST00000415143 PLIN1O60240 522 aa17.46■□□□□ 0.39
SSR4P1-201ENST00000415143 MS4A1P11836 297 aa17.46■□□□□ 0.39
SSR4P1-201ENST00000415143 PDE3AQ14432 1141 aa17.46■□□□□ 0.39
SSR4P1-201ENST00000415143 KIF20BQ96Q89 1820 aa17.46■□□□□ 0.39
SSR4P1-201ENST00000415143 PPIP5K1Q6PFW1 1433 aa17.46■□□□□ 0.39
SSR4P1-201ENST00000415143 CPSF1Q10570 1443 aaKnown RBP17.45■□□□□ 0.38
SSR4P1-201ENST00000415143 FCHSD2O94868 740 aa17.44■□□□□ 0.38
SSR4P1-201ENST00000415143 CANXP27824 592 aaKnown RBP17.44■□□□□ 0.38
SSR4P1-201ENST00000415143 CENPQQ7L2Z9 268 aaPredicted RBP17.44■□□□□ 0.38
SSR4P1-201ENST00000415143 DCCP43146 1447 aa17.44■□□□□ 0.38
SSR4P1-201ENST00000415143 MST1RQ04912 1400 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms