RNA–Protein interactions for RNA: ENST00000414887.1

SNX3P1X-201, Transcript of sorting nexin 3 pseudogene 1 X-linked, humanhuman

BASIC

Gene SNX3P1X, Length 175 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3P1X-201ENST00000414887 CCDC24Q8N4L8 307 aa0.28□□□□□ -2.36
SNX3P1X-201ENST00000414887 CAAP1Q9H8G2 361 aa0.28□□□□□ -2.36
SNX3P1X-201ENST00000414887 CBX8Q9HC52 389 aa0.28□□□□□ -2.36
SNX3P1X-201ENST00000414887 CSMD2Q7Z408 3487 aa0.28□□□□□ -2.36
SNX3P1X-201ENST00000414887 CUBNO60494 3623 aa0.28□□□□□ -2.36
SNX3P1X-201ENST00000414887 ICE1Q9Y2F5 2266 aa0.27□□□□□ -2.37
SNX3P1X-201ENST00000414887 COL4A4P53420 1690 aaPredicted RBP0.27□□□□□ -2.37
SNX3P1X-201ENST00000414887 SPTBN2O15020 2390 aa0.27□□□□□ -2.37
SNX3P1X-201ENST00000414887 DCHS2Q6V1P9 2916 aa0.27□□□□□ -2.37
SNX3P1X-201ENST00000414887 KIAA1324LA8MWY0 1029 aaPredicted RBP0.27□□□□□ -2.37
SNX3P1X-201ENST00000414887 C3orf80F5H4A9 247 aa0.27□□□□□ -2.37
SNX3P1X-201ENST00000414887 TOP3BO95985 862 aaKnown RBP0.27□□□□□ -2.37
SNX3P1X-201ENST00000414887 PRB1P04280 392 aa0.27□□□□□ -2.37
SNX3P1X-201ENST00000414887 KIAA1324Q6UXG2 1013 aaKnown RBP0.27□□□□□ -2.37
SNX3P1X-201ENST00000414887 GAREM2Q75VX8 874 aa0.27□□□□□ -2.37
SNX3P1X-201ENST00000414887 MMP21Q8N119 569 aa0.27□□□□□ -2.37
SNX3P1X-201ENST00000414887 SYT3Q9BQG1 590 aa0.27□□□□□ -2.37
SNX3P1X-201ENST00000414887 GRIP2Q9C0E4 1043 aa0.27□□□□□ -2.37
SNX3P1X-201ENST00000414887 CSPG4Q6UVK1 2322 aa0.27□□□□□ -2.37
SNX3P1X-201ENST00000414887 UTRNP46939 3433 aa0.27□□□□□ -2.37
SNX3P1X-201ENST00000414887 SLIT3O75094 1523 aa0.27□□□□□ -2.37
SNX3P1X-201ENST00000414887 NBPF19A0A087WUL8 3843 aa0.27□□□□□ -2.37
SNX3P1X-201ENST00000414887 LOC400499M0QZD8 3231 aa0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 CNTRLQ7Z7A1 2325 aa0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 ZNF469Q96JG9 3925 aaPredicted RBP0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 RBMY1BA6NDE4 496 aaKnown RBP0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 RBMY1EA6NEQ0 496 aaKnown RBP0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 GSC2O15499 205 aa0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 HNRNPA1P09651 372 aaKnown RBP eCLIP0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 RBMY1DP0C7P1 496 aaKnown RBP0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 IL4RP24394 825 aa0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 KRT85P78386 507 aa0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 TMEM151BQ8IW70 566 aa0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 ADAM32Q8TC27 787 aa0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 CABLES1Q8TDN4 633 aa0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 SYMPKQ92797 1274 aaKnown RBP0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 PHF12Q96QT6 1004 aa0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 LRFN3Q9BTN0 628 aa0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 C1QTNF1Q9BXJ1 281 aa0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 CACNA2D2Q9NY47 1150 aa0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 MYT1LQ9UL68 1186 aa0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 STXBP5LQ9Y2K9 1186 aa0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 IQSEC2Q5JU85 1478 aa0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 SLIT2O94813 1529 aa0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 MYCBP2O75592 4640 aa0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 CENPEQ02224 2701 aa0.26□□□□□ -2.37
SNX3P1X-201ENST00000414887 FRYLO94915 3013 aa0.25□□□□□ -2.37
SNX3P1X-201ENST00000414887 F8P00451 2351 aa0.25□□□□□ -2.37
SNX3P1X-201ENST00000414887 RAPGEF6Q8TEU7 1601 aa0.25□□□□□ -2.37
SNX3P1X-201ENST00000414887 KRTAP1-4P0C5Y4 121 aa0.25□□□□□ -2.37
SNX3P1X-201ENST00000414887 POTEIP0CG38 1075 aa0.25□□□□□ -2.37
SNX3P1X-201ENST00000414887 HOXB4P17483 251 aaPredicted RBP0.25□□□□□ -2.37
SNX3P1X-201ENST00000414887 SFSWAPQ12872 951 aaKnown RBP0.25□□□□□ -2.37
SNX3P1X-201ENST00000414887 LBRQ14739 615 aaKnown RBP0.25□□□□□ -2.37
SNX3P1X-201ENST00000414887 R3HDM1Q15032 1099 aaKnown RBP0.25□□□□□ -2.37
SNX3P1X-201ENST00000414887 ANKFY1Q9P2R3 1169 aa0.25□□□□□ -2.37
SNX3P1X-201ENST00000414887 SPENQ96T58 3664 aaKnown RBP0.25□□□□□ -2.37
SNX3P1X-201ENST00000414887 MGAQ8IWI9 3026 aa0.25□□□□□ -2.37
SNX3P1X-201ENST00000414887 ARID1AO14497 2285 aa0.25□□□□□ -2.37
SNX3P1X-201ENST00000414887 SHANK1Q9Y566 2161 aa0.25□□□□□ -2.37
SNX3P1X-201ENST00000414887 ARHGEF40Q8TER5 1519 aa0.24□□□□□ -2.37
SNX3P1X-201ENST00000414887 DMXL1Q9Y485 3027 aa0.24□□□□□ -2.37
SNX3P1X-201ENST00000414887 FOXN1O15353 648 aa0.24□□□□□ -2.37
SNX3P1X-201ENST00000414887 RBMY1A1P0DJD3 496 aaKnown RBP0.24□□□□□ -2.37
SNX3P1X-201ENST00000414887 RBMY1CP0DJD4 496 aa0.24□□□□□ -2.37
SNX3P1X-201ENST00000414887 PROZP22891 400 aa0.24□□□□□ -2.37
SNX3P1X-201ENST00000414887 ID4P47928 161 aa0.24□□□□□ -2.37
SNX3P1X-201ENST00000414887 HTRA3P83110 453 aa0.24□□□□□ -2.37
SNX3P1X-201ENST00000414887 RBMY1FQ15415 496 aaKnown RBP0.24□□□□□ -2.37
SNX3P1X-201ENST00000414887 LELP1Q5T871 98 aa0.24□□□□□ -2.37
SNX3P1X-201ENST00000414887 NBPF14Q5TI25 921 aa0.24□□□□□ -2.37
SNX3P1X-201ENST00000414887 LRSAM1Q6UWE0 723 aa0.24□□□□□ -2.37
SNX3P1X-201ENST00000414887 CAPN12Q6ZSI9 719 aa0.24□□□□□ -2.37
SNX3P1X-201ENST00000414887 NBPF15Q8N660 670 aa0.24□□□□□ -2.37
SNX3P1X-201ENST00000414887 CFAP44Q96MT7 982 aa0.24□□□□□ -2.37
SNX3P1X-201ENST00000414887 SMG1Q96Q15 3661 aaKnown RBP0.24□□□□□ -2.37
SNX3P1X-201ENST00000414887 VPS13AQ96RL7 3174 aa0.24□□□□□ -2.37
SNX3P1X-201ENST00000414887 CICQ96RK0 1608 aaPredicted RBP0.24□□□□□ -2.37
SNX3P1X-201ENST00000414887 BCL9LQ86UU0 1499 aa0.23□□□□□ -2.37
SNX3P1X-201ENST00000414887 YTHDC2Q9H6S0 1430 aaKnown RBP0.23□□□□□ -2.37
SNX3P1X-201ENST00000414887 KDM4EB2RXH2 506 aaPredicted RBP0.23□□□□□ -2.37
SNX3P1X-201ENST00000414887 TAF4O00268 1085 aa0.23□□□□□ -2.37
SNX3P1X-201ENST00000414887 LCE2BO14633 110 aa0.23□□□□□ -2.37
SNX3P1X-201ENST00000414887 TYRP1P17643 537 aa0.23□□□□□ -2.37
SNX3P1X-201ENST00000414887 ITGB7P26010 798 aa0.23□□□□□ -2.37
SNX3P1X-201ENST00000414887 SOWAHCQ53LP3 525 aaPredicted RBP0.23□□□□□ -2.37
SNX3P1X-201ENST00000414887 MCUQ8NE86 351 aa0.23□□□□□ -2.37
SNX3P1X-201ENST00000414887 CCER1Q8TC90 406 aaPredicted RBP0.23□□□□□ -2.37
SNX3P1X-201ENST00000414887 RELTQ969Z4 430 aa0.23□□□□□ -2.37
SNX3P1X-201ENST00000414887 FAM161BQ96MY7 647 aa0.23□□□□□ -2.37
SNX3P1X-201ENST00000414887 KRTAP9-3Q9BYQ3 159 aa0.23□□□□□ -2.37
SNX3P1X-201ENST00000414887 ZCCHC2Q9C0B9 1178 aaKnown RBP0.23□□□□□ -2.37
SNX3P1X-201ENST00000414887 ZNF768Q9H5H4 540 aaKnown RBP0.23□□□□□ -2.37
SNX3P1X-201ENST00000414887 XIRP2A4UGR9 3374 aa0.23□□□□□ -2.37
SNX3P1X-201ENST00000414887 APC2O95996 2303 aa0.22□□□□□ -2.37
SNX3P1X-201ENST00000414887 PPRC1Q5VV67 1664 aaKnown RBP0.22□□□□□ -2.37
SNX3P1X-201ENST00000414887 POTEB2H3BUK9 544 aa0.22□□□□□ -2.37
SNX3P1X-201ENST00000414887 PPM1GO15355 546 aaPredicted RBP0.22□□□□□ -2.37
SNX3P1X-201ENST00000414887 ELAVL4P26378 380 aaKnown RBP0.22□□□□□ -2.37
SNX3P1X-201ENST00000414887 KRTAP19-6Q3LI70 58 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms