RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 FAM9BQ8IZU0 186 aa15.27■□□□□ 0.04
LINC00330-201ENST00000414562 CERKQ8TCT0 537 aa15.27■□□□□ 0.04
LINC00330-201ENST00000414562 NRKQ7Z2Y5 1582 aa15.27■□□□□ 0.04
LINC00330-201ENST00000414562 CC2D1BQ5T0F9 858 aaKnown RBP15.27■□□□□ 0.03
LINC00330-201ENST00000414562 MYBBP1AQ9BQG0 1328 aaKnown RBP15.27■□□□□ 0.03
LINC00330-201ENST00000414562 NGDNQ8NEJ9 315 aaKnown RBP15.26■□□□□ 0.03
LINC00330-201ENST00000414562 USP6P35125 1406 aa15.26■□□□□ 0.03
LINC00330-201ENST00000414562 TERF2IPQ9NYB0 399 aa15.26■□□□□ 0.03
LINC00330-201ENST00000414562 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.25■□□□□ 0.03
LINC00330-201ENST00000414562 FYB1O15117 783 aa15.24■□□□□ 0.03
LINC00330-201ENST00000414562 NME9Q86XW9 330 aa15.24■□□□□ 0.03
LINC00330-201ENST00000414562 PARD3Q8TEW0 1356 aa15.24■□□□□ 0.03
LINC00330-201ENST00000414562 TTC21BQ7Z4L5 1316 aa15.24■□□□□ 0.03
LINC00330-201ENST00000414562 HNRNPUQ00839 825 aaKnown RBP eCLIP15.24■□□□□ 0.03
LINC00330-201ENST00000414562 HDGFL2Q7Z4V5 671 aaPredicted RBP15.24■□□□□ 0.03
LINC00330-201ENST00000414562 TRPM3Q9HCF6 1732 aaPredicted RBP15.23■□□□□ 0.03
LINC00330-201ENST00000414562 ROBO1Q9Y6N7 1651 aa15.23■□□□□ 0.03
LINC00330-201ENST00000414562 SCAF1Q9H7N4 1312 aaKnown RBP15.23■□□□□ 0.03
LINC00330-201ENST00000414562 GGNBP2Q9H3C7 697 aa15.22■□□□□ 0.03
LINC00330-201ENST00000414562 EDC4Q6P2E9 1401 aaKnown RBP15.22■□□□□ 0.03
LINC00330-201ENST00000414562 KIF1AQ12756 1690 aa15.22■□□□□ 0.03
LINC00330-201ENST00000414562 FBLN1P23142 703 aa15.22■□□□□ 0.03
LINC00330-201ENST00000414562 ZNF692Q9BU19 519 aaPredicted RBP15.22■□□□□ 0.03
LINC00330-201ENST00000414562 MARF1Q9Y4F3 1742 aaKnown RBP15.22■□□□□ 0.03
LINC00330-201ENST00000414562 BRD4O60885 1362 aaPredicted RBP15.21■□□□□ 0.03
LINC00330-201ENST00000414562 PIK3C2AO00443 1686 aa15.21■□□□□ 0.03
LINC00330-201ENST00000414562 PXDNQ92626 1479 aa15.21■□□□□ 0.03
LINC00330-201ENST00000414562 KRT28Q7Z3Y7 464 aa15.21■□□□□ 0.02
LINC00330-201ENST00000414562 NLRP13Q86W25 1043 aa15.21■□□□□ 0.02
LINC00330-201ENST00000414562 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.02
LINC00330-201ENST00000414562 PSME1Q06323 249 aa15.2■□□□□ 0.02
LINC00330-201ENST00000414562 KIF20BQ96Q89 1820 aa15.2■□□□□ 0.02
LINC00330-201ENST00000414562 UBAP1LF5GYI3 381 aa15.19■□□□□ 0.02
LINC00330-201ENST00000414562 PIP4K2BP78356 416 aa15.19■□□□□ 0.02
LINC00330-201ENST00000414562 NUTM2GQ5VZR2 741 aa15.19■□□□□ 0.02
LINC00330-201ENST00000414562 NHSL1Q5SYE7 1610 aa15.19■□□□□ 0.02
LINC00330-201ENST00000414562 IQSEC2Q5JU85 1478 aa15.18■□□□□ 0.02
LINC00330-201ENST00000414562 NPC1L1Q9UHC9 1359 aa15.17■□□□□ 0.02
LINC00330-201ENST00000414562 ALS2Q96Q42 1657 aa15.17■□□□□ 0.02
LINC00330-201ENST00000414562 CGNL1Q0VF96 1302 aa15.17■□□□□ 0.02
LINC00330-201ENST00000414562 SOS2Q07890 1332 aaPredicted RBP15.16■□□□□ 0.02
LINC00330-201ENST00000414562 PAK3O75914 559 aaPredicted RBP15.16■□□□□ 0.02
LINC00330-201ENST00000414562 PNISRQ8TF01 805 aaKnown RBP15.16■□□□□ 0.02
LINC00330-201ENST00000414562 ANKRD26Q9UPS8 1709 aa15.16■□□□□ 0.02
LINC00330-201ENST00000414562 TOM1O60784 492 aa15.16■□□□□ 0.02
LINC00330-201ENST00000414562 TNNT2P45379 298 aaPredicted RBP15.16■□□□□ 0.02
LINC00330-201ENST00000414562 OVOS2A0A0J9YW53 1432 aa15.15■□□□□ 0.02
LINC00330-201ENST00000414562 OVOS2Q6IE36 1432 aa15.15■□□□□ 0.02
LINC00330-201ENST00000414562 NPHP3Q7Z494 1330 aa15.15■□□□□ 0.02
LINC00330-201ENST00000414562 PLEKHG5O94827 1062 aa15.14■□□□□ 0.01
LINC00330-201ENST00000414562 SPATA31A3Q5VYP0 1347 aa15.13■□□□□ 0.01
LINC00330-201ENST00000414562 TTC21AQ8NDW8 1320 aa15.13■□□□□ 0.01
LINC00330-201ENST00000414562 ABTB2Q8N961 1025 aa15.13■□□□□ 0.01
LINC00330-201ENST00000414562 USP31Q70CQ4 1352 aa15.13■□□□□ 0.01
LINC00330-201ENST00000414562 AHDC1Q5TGY3 1603 aaPredicted RBP15.13■□□□□ 0.01
LINC00330-201ENST00000414562 MED1Q15648 1581 aaPredicted RBP15.12■□□□□ 0.01
LINC00330-201ENST00000414562 PPP2R1AP30153 589 aa15.12■□□□□ 0.01
LINC00330-201ENST00000414562 NLRP6P59044 892 aa15.12■□□□□ 0.01
LINC00330-201ENST00000414562 MORC1Q86VD1 984 aa15.12■□□□□ 0.01
LINC00330-201ENST00000414562 CABLES1Q8TDN4 633 aa15.12■□□□□ 0.01
LINC00330-201ENST00000414562 USP54Q70EL1 1684 aa15.12■□□□□ 0.01
LINC00330-201ENST00000414562 SBNO1A3KN83 1393 aa15.12■□□□□ 0.01
LINC00330-201ENST00000414562 COL16A1Q07092 1604 aaPredicted RBP15.11■□□□□ 0.01
LINC00330-201ENST00000414562 CRYBG1Q9Y4K1 1723 aa15.11■□□□□ 0.01
LINC00330-201ENST00000414562 LMOD2Q6P5Q4 547 aa15.1■□□□□ 0.01
LINC00330-201ENST00000414562 NSD2O96028 1365 aa15.1■□□□□ 0.01
LINC00330-201ENST00000414562 TNS3Q68CZ2 1445 aa15.1■□□□□ 0.01
LINC00330-201ENST00000414562 MAP2P11137 1827 aaKnown RBP15.1■□□□□ 0.01
LINC00330-201ENST00000414562 SOX12O15370 315 aa15.1■□□□□ 0.01
LINC00330-201ENST00000414562 PHLPP1O60346 1717 aa15.1■□□□□ 0.01
LINC00330-201ENST00000414562 ZBED9Q6R2W3 1325 aa15.09■□□□□ 0.01
LINC00330-201ENST00000414562 COG3Q96JB2 828 aa15.09■□□□□ 0.01
LINC00330-201ENST00000414562 RRS1Q15050 365 aaKnown RBP15.08■□□□□ 0
LINC00330-201ENST00000414562 USP19O94966 1318 aa15.07■□□□□ 0
LINC00330-201ENST00000414562 PEAK1Q9H792 1746 aa15.07■□□□□ 0
LINC00330-201ENST00000414562 POLKQ9UBT6 870 aa15.07■□□□□ 0
LINC00330-201ENST00000414562 EMILIN1Q9Y6C2 1016 aa15.07■□□□□ 0
LINC00330-201ENST00000414562 NFAT5O94916 1531 aa15.07■□□□□ 0
LINC00330-201ENST00000414562 SLIT3O75094 1523 aa15.06■□□□□ 0
LINC00330-201ENST00000414562 HSPA1LP34931 641 aa15.05■□□□□ -0
LINC00330-201ENST00000414562 MTHFSP49914 203 aa15.05■□□□□ -0
LINC00330-201ENST00000414562 PHRF1Q9P1Y6 1649 aaKnown RBP15.05■□□□□ -0
LINC00330-201ENST00000414562 ABCA3Q99758 1704 aa15.05■□□□□ -0
LINC00330-201ENST00000414562 GCP02774 474 aa15.04■□□□□ -0
LINC00330-201ENST00000414562 WDR43Q15061 677 aaKnown RBP eCLIP15.04■□□□□ -0
LINC00330-201ENST00000414562 PNPLA6Q8IY17 1366 aa15.04■□□□□ -0
LINC00330-201ENST00000414562 MAP3K19Q56UN5 1328 aa15.03■□□□□ -0
LINC00330-201ENST00000414562 AATKQ6ZMQ8 1374 aa15.03■□□□□ -0
LINC00330-201ENST00000414562 LRRC59Q96AG4 307 aaKnown RBP15.02■□□□□ -0
LINC00330-201ENST00000414562 LTN1O94822 1766 aa15.02□□□□□ -0.01
LINC00330-201ENST00000414562 SENP3-EIF4A1A0A087X0R7 540 aa15.02□□□□□ -0.01
LINC00330-201ENST00000414562 ARHGEF10O15013 1369 aa15.02□□□□□ -0.01
LINC00330-201ENST00000414562 COL3A1P02461 1466 aaPredicted RBP15.02□□□□□ -0.01
LINC00330-201ENST00000414562 ZC3H6P61129 1189 aaKnown RBP15.01□□□□□ -0.01
LINC00330-201ENST00000414562 SMG6Q86US8 1419 aaKnown RBP15.01□□□□□ -0.01
LINC00330-201ENST00000414562 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
LINC00330-201ENST00000414562 COL22A1Q8NFW1 1626 aaPredicted RBP15□□□□□ -0.01
LINC00330-201ENST00000414562 ARHGEF25Q86VW2 580 aa15□□□□□ -0.01
LINC00330-201ENST00000414562 AXIN2Q9Y2T1 843 aa15□□□□□ -0.01
LINC00330-201ENST00000414562 COL18A1P39060 1754 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms