RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 CCDC9Q9Y3X0 531 aaKnown RBP29.66■■■□□ 2.34
LMBR1-203ENST00000414218 TOPAZ1Q8N9V7 1692 aa29.66■■■□□ 2.34
LMBR1-203ENST00000414218 ACEP12821 1306 aa29.65■■■□□ 2.34
LMBR1-203ENST00000414218 PLEKHG3A1L390 1219 aa29.63■■■□□ 2.33
LMBR1-203ENST00000414218 SRPK2P78362 688 aaKnown RBP29.63■■■□□ 2.33
LMBR1-203ENST00000414218 NBPF8Q3BBV2 869 aa29.63■■■□□ 2.33
LMBR1-203ENST00000414218 POLR3AO14802 1390 aaPredicted RBP29.63■■■□□ 2.33
LMBR1-203ENST00000414218 CRYBG1Q9Y4K1 1723 aa29.62■■■□□ 2.33
LMBR1-203ENST00000414218 TRPM1Q7Z4N2 1603 aa29.61■■■□□ 2.33
LMBR1-203ENST00000414218 QRICH2Q9H0J4 1663 aa29.61■■■□□ 2.33
LMBR1-203ENST00000414218 BTG4Q9NY30 223 aa29.61■■■□□ 2.33
LMBR1-203ENST00000414218 CABP2Q9NPB3 220 aa29.6■■■□□ 2.33
LMBR1-203ENST00000414218 COL14A1Q05707 1796 aaKnown RBP29.59■■■□□ 2.33
LMBR1-203ENST00000414218 NUTM2GQ5VZR2 741 aa29.59■■■□□ 2.33
LMBR1-203ENST00000414218 BRWD3Q6RI45 1802 aa29.58■■■□□ 2.33
LMBR1-203ENST00000414218 SEPT12Q8IYM1 358 aa29.58■■■□□ 2.33
LMBR1-203ENST00000414218 NRAPQ86VF7 1730 aa29.57■■■□□ 2.32
LMBR1-203ENST00000414218 PPIP5K1Q6PFW1 1433 aa29.55■■■□□ 2.32
LMBR1-203ENST00000414218 PRDM11Q9NQV5 511 aa29.55■■■□□ 2.32
LMBR1-203ENST00000414218 ROCK2O75116 1388 aaKnown RBP29.54■■■□□ 2.32
LMBR1-203ENST00000414218 ONECUT3O60422 494 aaPredicted RBP29.54■■■□□ 2.32
LMBR1-203ENST00000414218 PHRF1Q9P1Y6 1649 aaKnown RBP29.52■■■□□ 2.32
LMBR1-203ENST00000414218 EP400Q96L91 3159 aa29.52■■■□□ 2.32
LMBR1-203ENST00000414218 KIAA0232Q92628 1395 aa29.52■■■□□ 2.32
LMBR1-203ENST00000414218 CCDC125Q86Z20 511 aa29.51■■■□□ 2.31
LMBR1-203ENST00000414218 ABTB2Q8N961 1025 aa29.51■■■□□ 2.31
LMBR1-203ENST00000414218 ZC3H6P61129 1189 aaKnown RBP29.5■■■□□ 2.31
LMBR1-203ENST00000414218 CHRNA2Q15822 529 aa29.5■■■□□ 2.31
LMBR1-203ENST00000414218 FAM98CQ17RN3 349 aaKnown RBP29.49■■■□□ 2.31
LMBR1-203ENST00000414218 CABP1Q9NZU7 370 aa29.49■■■□□ 2.31
LMBR1-203ENST00000414218 EVC2Q86UK5 1308 aa29.48■■■□□ 2.31
LMBR1-203ENST00000414218 A0A0G2JS52 829 aa29.48■■■□□ 2.31
LMBR1-203ENST00000414218 MYT1Q01538 1121 aa29.48■■■□□ 2.31
LMBR1-203ENST00000414218 KRT27Q7Z3Y8 459 aa29.46■■■□□ 2.31
LMBR1-203ENST00000414218 SPATA31A5Q5VU36 1347 aa29.45■■■□□ 2.31
LMBR1-203ENST00000414218 SPATA31A7Q8IWB4 1347 aa29.45■■■□□ 2.31
LMBR1-203ENST00000414218 TRIM26Q12899 539 aaPredicted RBP29.43■■■□□ 2.3
LMBR1-203ENST00000414218 NLRP13Q86W25 1043 aa29.42■■■□□ 2.3
LMBR1-203ENST00000414218 STRN4Q9NRL3 753 aa29.42■■■□□ 2.3
LMBR1-203ENST00000414218 BLMP54132 1417 aaPredicted RBP29.42■■■□□ 2.3
LMBR1-203ENST00000414218 USP19O94966 1318 aa29.42■■■□□ 2.3
LMBR1-203ENST00000414218 NRKQ7Z2Y5 1582 aa29.41■■■□□ 2.3
LMBR1-203ENST00000414218 BRD4O60885 1362 aaPredicted RBP29.4■■■□□ 2.3
LMBR1-203ENST00000414218 USP6P35125 1406 aa29.4■■■□□ 2.3
LMBR1-203ENST00000414218 TONSLQ96HA7 1378 aa29.39■■■□□ 2.29
LMBR1-203ENST00000414218 GCP02774 474 aa29.38■■■□□ 2.29
LMBR1-203ENST00000414218 EVA1CP58658 441 aa29.37■■■□□ 2.29
LMBR1-203ENST00000414218 CARD11Q9BXL7 1154 aa29.37■■■□□ 2.29
LMBR1-203ENST00000414218 SPATA31A1Q5TZJ5 1347 aa29.37■■■□□ 2.29
LMBR1-203ENST00000414218 CPDO75976 1380 aa29.36■■■□□ 2.29
LMBR1-203ENST00000414218 NLRP6P59044 892 aa29.35■■■□□ 2.29
LMBR1-203ENST00000414218 SF3B2Q13435 895 aaKnown RBP29.35■■■□□ 2.29
LMBR1-203ENST00000414218 DEFB132Q7Z7B7 95 aa29.34■■■□□ 2.29
LMBR1-203ENST00000414218 CAMTA1Q9Y6Y1 1673 aa29.34■■■□□ 2.29
LMBR1-203ENST00000414218 ZRANB1Q9UGI0 708 aa29.33■■■□□ 2.29
LMBR1-203ENST00000414218 SSH2Q76I76 1423 aa29.33■■■□□ 2.29
LMBR1-203ENST00000414218 THSD7AQ9UPZ6 1657 aa29.33■■■□□ 2.29
LMBR1-203ENST00000414218 FAM182BQ5T319 152 aa29.32■■■□□ 2.28
LMBR1-203ENST00000414218 ZNF692Q9BU19 519 aaPredicted RBP29.31■■■□□ 2.28
LMBR1-203ENST00000414218 USP35Q9P2H5 1018 aa29.31■■■□□ 2.28
LMBR1-203ENST00000414218 LMO7Q8WWI1 1683 aa29.31■■■□□ 2.28
LMBR1-203ENST00000414218 LARP1Q6PKG0 1096 aaKnown RBP29.3■■■□□ 2.28
LMBR1-203ENST00000414218 PIK3C2AO00443 1686 aa29.29■■■□□ 2.28
LMBR1-203ENST00000414218 ZBTB7CA1YPR0 619 aa29.29■■■□□ 2.28
LMBR1-203ENST00000414218 AKAP12Q02952 1782 aa29.29■■■□□ 2.28
LMBR1-203ENST00000414218 SBNO2Q9Y2G9 1366 aa29.27■■■□□ 2.28
LMBR1-203ENST00000414218 TTC21BQ7Z4L5 1316 aa29.27■■■□□ 2.28
LMBR1-203ENST00000414218 SLIT3O75094 1523 aa29.26■■■□□ 2.27
LMBR1-203ENST00000414218 CPSF1Q10570 1443 aaKnown RBP29.24■■■□□ 2.27
LMBR1-203ENST00000414218 BARGINQ6ZT62 677 aa29.23■■■□□ 2.27
LMBR1-203ENST00000414218 KTN1Q86UP2 1357 aaKnown RBP29.23■■■□□ 2.27
LMBR1-203ENST00000414218 TCP11L2Q8N4U5 519 aa29.22■■■□□ 2.27
LMBR1-203ENST00000414218 COL5A2P05997 1499 aaPredicted RBP29.22■■■□□ 2.27
LMBR1-203ENST00000414218 TTC21AQ8NDW8 1320 aa29.21■■■□□ 2.27
LMBR1-203ENST00000414218 BAG6P46379 1132 aa29.2■■■□□ 2.26
LMBR1-203ENST00000414218 AATKQ6ZMQ8 1374 aa29.2■■■□□ 2.26
LMBR1-203ENST00000414218 RGPD1P0DJD0 1748 aa29.18■■■□□ 2.26
LMBR1-203ENST00000414218 TMC1Q8TDI8 760 aa29.18■■■□□ 2.26
LMBR1-203ENST00000414218 SOX12O15370 315 aa29.17■■■□□ 2.26
LMBR1-203ENST00000414218 THRAP3Q9Y2W1 955 aaKnown RBP29.17■■■□□ 2.26
LMBR1-203ENST00000414218 MON2Q7Z3U7 1717 aa29.17■■■□□ 2.26
LMBR1-203ENST00000414218 COL18A1P39060 1754 aa29.16■■■□□ 2.26
LMBR1-203ENST00000414218 PDE3BQ13370 1112 aa29.16■■■□□ 2.26
LMBR1-203ENST00000414218 FAM196AQ6ZSG2 479 aa29.16■■■□□ 2.26
LMBR1-203ENST00000414218 KCNH5Q8NCM2 988 aa29.16■■■□□ 2.26
LMBR1-203ENST00000414218 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.15■■■□□ 2.262e-6■■□□□ 12.3
LMBR1-203ENST00000414218 SLC12A5Q9H2X9 1139 aa29.15■■■□□ 2.26
LMBR1-203ENST00000414218 CRB1P82279 1406 aa29.14■■■□□ 2.26
LMBR1-203ENST00000414218 EN1Q05925 392 aaPredicted RBP29.14■■■□□ 2.26
LMBR1-203ENST00000414218 ARHGEF25Q86VW2 580 aa29.14■■■□□ 2.26
LMBR1-203ENST00000414218 AXIN2Q9Y2T1 843 aa29.14■■■□□ 2.26
LMBR1-203ENST00000414218 CD163L1Q9NR16 1453 aa29.13■■■□□ 2.25
LMBR1-203ENST00000414218 TRIM37O94972 964 aa29.12■■■□□ 2.25
LMBR1-203ENST00000414218 TNS1Q9HBL0 1735 aaKnown RBP29.11■■■□□ 2.25
LMBR1-203ENST00000414218 ST20-MTHFSA0A0A6YYL1 179 aa29.11■■■□□ 2.25
LMBR1-203ENST00000414218 HDGFL2Q7Z4V5 671 aaPredicted RBP29.11■■■□□ 2.25
LMBR1-203ENST00000414218 TOM1L2Q6ZVM7 507 aa29.1■■■□□ 2.25
LMBR1-203ENST00000414218 RGPD5Q99666 1765 aa29.1■■■□□ 2.25
LMBR1-203ENST00000414218 NME9Q86XW9 330 aa29.09■■■□□ 2.25
LMBR1-203ENST00000414218 PUS7Q96PZ0 661 aaKnown RBP29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms