RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 FKBPLQ9UIM3 349 aa7.87□□□□□ -1.15
HMGB1P11-201ENST00000413899 GPKOWQ92917 476 aaPredicted RBP eCLIP7.86□□□□□ -1.15
HMGB1P11-201ENST00000413899 UNC93B1Q9H1C4 597 aa7.86□□□□□ -1.15
HMGB1P11-201ENST00000413899 GDPD2Q9HCC8 539 aa7.86□□□□□ -1.15
HMGB1P11-201ENST00000413899 TBC1D2BQ9UPU7 963 aa7.86□□□□□ -1.15
HMGB1P11-201ENST00000413899 PLA2G2CQ5R387 149 aa7.85□□□□□ -1.15
HMGB1P11-201ENST00000413899 CLUAP1Q96AJ1 413 aa7.85□□□□□ -1.15
HMGB1P11-201ENST00000413899 RPIAP49247 311 aa7.84□□□□□ -1.15
HMGB1P11-201ENST00000413899 NBPF14Q5TI25 921 aa7.84□□□□□ -1.15
HMGB1P11-201ENST00000413899 FNBP4Q8N3X1 1017 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P11-201ENST00000413899 IRF5Q13568 498 aa7.83□□□□□ -1.16
HMGB1P11-201ENST00000413899 PROSER2Q86WR7 435 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P11-201ENST00000413899 GPSM3Q9Y4H4 160 aa7.83□□□□□ -1.16
HMGB1P11-201ENST00000413899 PDXDC2PQ6P474 469 aa7.82□□□□□ -1.16
HMGB1P11-201ENST00000413899 EMID1Q96A84 441 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P11-201ENST00000413899 ZBTB24O43167 697 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P11-201ENST00000413899 ABL2P42684 1182 aa7.81□□□□□ -1.16
HMGB1P11-201ENST00000413899 TRIM32Q13049 653 aa7.81□□□□□ -1.16
HMGB1P11-201ENST00000413899 WWC1Q8IX03 1113 aa7.81□□□□□ -1.16
HMGB1P11-201ENST00000413899 WASHC4Q2M389 1173 aa7.8□□□□□ -1.16
HMGB1P11-201ENST00000413899 LIAT1Q6ZQX7 453 aa7.8□□□□□ -1.16
HMGB1P11-201ENST00000413899 SH3BP5LQ7L8J4 393 aa7.8□□□□□ -1.16
HMGB1P11-201ENST00000413899 ZNF511Q8NB15 262 aa7.8□□□□□ -1.16
HMGB1P11-201ENST00000413899 TRAK2O60296 914 aa7.79□□□□□ -1.16
HMGB1P11-201ENST00000413899 WNT7BP56706 349 aa7.79□□□□□ -1.16
HMGB1P11-201ENST00000413899 BAP1Q92560 729 aa7.79□□□□□ -1.16
HMGB1P11-201ENST00000413899 ZBBXA8MT70 800 aa7.78□□□□□ -1.16
HMGB1P11-201ENST00000413899 CD2BP2O95400 341 aaKnown RBP7.78□□□□□ -1.16
HMGB1P11-201ENST00000413899 SLC19A1P41440 591 aa7.78□□□□□ -1.16
HMGB1P11-201ENST00000413899 PTK2Q05397 1052 aa7.78□□□□□ -1.16
HMGB1P11-201ENST00000413899 NR1H3Q13133 447 aa7.78□□□□□ -1.16
HMGB1P11-201ENST00000413899 SH3RF1Q7Z6J0 888 aa7.78□□□□□ -1.16
HMGB1P11-201ENST00000413899 SH3BP2P78314 561 aa7.77□□□□□ -1.17
HMGB1P11-201ENST00000413899 BPHLQ86WA6 291 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P11-201ENST00000413899 OCSTAMPQ9BR26 566 aa7.77□□□□□ -1.17
HMGB1P11-201ENST00000413899 V9GY48 417 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P11-201ENST00000413899 RGS20O76081 388 aa7.76□□□□□ -1.17
HMGB1P11-201ENST00000413899 FBXO45P0C2W1 286 aa7.76□□□□□ -1.17
HMGB1P11-201ENST00000413899 LINC01559Q495D7 138 aa7.76□□□□□ -1.17
HMGB1P11-201ENST00000413899 ZNF330Q9Y3S2 320 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P11-201ENST00000413899 SKOR1P84550 965 aa7.75□□□□□ -1.17
HMGB1P11-201ENST00000413899 SPRYD7Q5W111 196 aa7.75□□□□□ -1.17
HMGB1P11-201ENST00000413899 C1QTNF2Q9BXJ5 285 aa7.75□□□□□ -1.17
HMGB1P11-201ENST00000413899 SOX11P35716 441 aa7.74□□□□□ -1.17
HMGB1P11-201ENST00000413899 C4orf48Q5BLP8 95 aa7.74□□□□□ -1.17
HMGB1P11-201ENST00000413899 FOXJ1Q92949 421 aa7.74□□□□□ -1.17
HMGB1P11-201ENST00000413899 ARHGAP9Q9BRR9 750 aa7.74□□□□□ -1.17
HMGB1P11-201ENST00000413899 PRKD2Q9BZL6 878 aa7.74□□□□□ -1.17
HMGB1P11-201ENST00000413899 MCCD1P59942 119 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P11-201ENST00000413899 VAC14Q08AM6 782 aa7.73□□□□□ -1.17
HMGB1P11-201ENST00000413899 ZNF598Q86UK7 904 aaKnown RBP7.73□□□□□ -1.17
HMGB1P11-201ENST00000413899 TRMT44Q8IYL2 757 aaKnown RBP7.73□□□□□ -1.17
HMGB1P11-201ENST00000413899 ADAM32Q8TC27 787 aa7.73□□□□□ -1.17
HMGB1P11-201ENST00000413899 WNT7AO00755 349 aa7.72□□□□□ -1.17
HMGB1P11-201ENST00000413899 VARSP26640 1264 aaKnown RBP7.72□□□□□ -1.17
HMGB1P11-201ENST00000413899 EIF4G2P78344 907 aaKnown RBP eCLIP7.72□□□□□ -1.17
HMGB1P11-201ENST00000413899 RC3H1Q5TC82 1133 aaKnown RBP7.72□□□□□ -1.17
HMGB1P11-201ENST00000413899 ZNF592Q92610 1267 aa7.72□□□□□ -1.17
HMGB1P11-201ENST00000413899 POM121CA8CG34 1229 aa7.71□□□□□ -1.18
HMGB1P11-201ENST00000413899 AGERQ15109 404 aa7.71□□□□□ -1.18
HMGB1P11-201ENST00000413899 ERFEQ4G0M1 354 aa7.71□□□□□ -1.18
HMGB1P11-201ENST00000413899 ZBTB33Q86T24 672 aa7.71□□□□□ -1.18
HMGB1P11-201ENST00000413899 ALG2Q9H553 416 aa7.71□□□□□ -1.18
HMGB1P11-201ENST00000413899 ZNF697Q5TEC3 545 aa7.7□□□□□ -1.18
HMGB1P11-201ENST00000413899 MPNDQ8N594 471 aa7.7□□□□□ -1.18
HMGB1P11-201ENST00000413899 FAM174AQ8TBP5 190 aa7.7□□□□□ -1.18
HMGB1P11-201ENST00000413899 MAGEB6P1A0A0J9YX57 407 aa7.69□□□□□ -1.18
HMGB1P11-201ENST00000413899 ZNF777Q9ULD5 760 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P11-201ENST00000413899 SIAH2O43255 324 aa7.68□□□□□ -1.18
HMGB1P11-201ENST00000413899 EHBP1Q8NDI1 1231 aa7.68□□□□□ -1.18
HMGB1P11-201ENST00000413899 ADAMTS19Q8TE59 1207 aa7.68□□□□□ -1.18
HMGB1P11-201ENST00000413899 CARD14Q9BXL6 1004 aa7.68□□□□□ -1.18
HMGB1P11-201ENST00000413899 PKD2L1Q9P0L9 805 aa7.68□□□□□ -1.18
HMGB1P11-201ENST00000413899 CDV3Q9UKY7 258 aaKnown RBP7.68□□□□□ -1.18
HMGB1P11-201ENST00000413899 MAP4K5Q9Y4K4 846 aa7.68□□□□□ -1.18
HMGB1P11-201ENST00000413899 GLMNQ92990 594 aa7.67□□□□□ -1.18
HMGB1P11-201ENST00000413899 MRGPRX2Q96LB1 330 aa7.67□□□□□ -1.18
HMGB1P11-201ENST00000413899 CDK15Q96Q40 435 aa7.67□□□□□ -1.18
HMGB1P11-201ENST00000413899 PCDHB9Q9Y5E1 797 aa7.67□□□□□ -1.18
HMGB1P11-201ENST00000413899 GDF9O60383 454 aa7.66□□□□□ -1.18
HMGB1P11-201ENST00000413899 PRR20EP86478 221 aa7.66□□□□□ -1.18
HMGB1P11-201ENST00000413899 PRR20CP86479 221 aa7.66□□□□□ -1.18
HMGB1P11-201ENST00000413899 PRR20DP86480 221 aa7.66□□□□□ -1.18
HMGB1P11-201ENST00000413899 PRR20BP86481 221 aa7.66□□□□□ -1.18
HMGB1P11-201ENST00000413899 PRR20AP86496 221 aa7.66□□□□□ -1.18
HMGB1P11-201ENST00000413899 SEMA3FQ13275 785 aa7.66□□□□□ -1.18
HMGB1P11-201ENST00000413899 HDGFL1Q5TGJ6 251 aa7.66□□□□□ -1.18
HMGB1P11-201ENST00000413899 DZIP3Q86Y13 1208 aaKnown RBP7.66□□□□□ -1.18
HMGB1P11-201ENST00000413899 SLC10A4Q96EP9 437 aa7.66□□□□□ -1.18
HMGB1P11-201ENST00000413899 C1orf115Q9H7X2 142 aa7.66□□□□□ -1.18
HMGB1P11-201ENST00000413899 SUPT5HO00267 1087 aaKnown RBP7.65□□□□□ -1.18
HMGB1P11-201ENST00000413899 ESPNB1AK53 854 aa7.64□□□□□ -1.19
HMGB1P11-201ENST00000413899 NBPF20Q3BBV1 942 aa7.64□□□□□ -1.19
HMGB1P11-201ENST00000413899 TRIM67Q6ZTA4 783 aa7.64□□□□□ -1.19
HMGB1P11-201ENST00000413899 CCDC125Q86Z20 511 aa7.64□□□□□ -1.19
HMGB1P11-201ENST00000413899 CALR3Q96L12 384 aaKnown RBP7.64□□□□□ -1.19
HMGB1P11-201ENST00000413899 CEP126Q9P2H0 1117 aa7.64□□□□□ -1.19
HMGB1P11-201ENST00000413899 ARID3CA6NKF2 412 aa7.63□□□□□ -1.19
HMGB1P11-201ENST00000413899 SEPT12Q8IYM1 358 aa7.63□□□□□ -1.19
HMGB1P11-201ENST00000413899 PHTF2Q8N3S3 785 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms