RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 SPATA31A7Q8IWB4 1347 aa14.27□□□□□ -0.12
RFFL-203ENST00000413582 EN1Q05925 392 aaPredicted RBP14.27□□□□□ -0.13
RFFL-203ENST00000413582 FAM182BQ5T319 152 aa14.26□□□□□ -0.13
RFFL-203ENST00000413582 GPRASP1Q5JY77 1395 aa14.25□□□□□ -0.13
RFFL-203ENST00000413582 PRR36Q9H6K5 1346 aa14.25□□□□□ -0.13
RFFL-203ENST00000413582 ACIN1Q9UKV3 1341 aaKnown RBP14.25□□□□□ -0.13
RFFL-203ENST00000413582 R3HDM1Q15032 1099 aaKnown RBP14.25□□□□□ -0.13
RFFL-203ENST00000413582 EIF3AQ14152 1382 aaKnown RBP14.24□□□□□ -0.13
RFFL-203ENST00000413582 PHRF1Q9P1Y6 1649 aaKnown RBP14.24□□□□□ -0.13
RFFL-203ENST00000413582 POGKQ9P215 609 aa14.24□□□□□ -0.13
RFFL-203ENST00000413582 RREB1Q92766 1687 aa14.23□□□□□ -0.13
RFFL-203ENST00000413582 ITSN1Q15811 1721 aa14.22□□□□□ -0.13
RFFL-203ENST00000413582 HIRIP3Q9BW71 556 aaPredicted RBP14.22□□□□□ -0.13
RFFL-203ENST00000413582 NUP188Q5SRE5 1749 aa14.21□□□□□ -0.13
RFFL-203ENST00000413582 EZH2Q15910 746 aaKnown RBP14.21□□□□□ -0.13
RFFL-203ENST00000413582 PRDM11Q9NQV5 511 aa14.21□□□□□ -0.13
RFFL-203ENST00000413582 SPATA31A1Q5TZJ5 1347 aa14.2□□□□□ -0.14
RFFL-203ENST00000413582 MINK1Q8N4C8 1332 aaPredicted RBP14.2□□□□□ -0.14
RFFL-203ENST00000413582 ATP7BP35670 1465 aa14.2□□□□□ -0.14
RFFL-203ENST00000413582 CAMKK2Q96RR4 588 aa14.2□□□□□ -0.14
RFFL-203ENST00000413582 PARD3Q8TEW0 1356 aa14.2□□□□□ -0.14
RFFL-203ENST00000413582 KIAA0232Q92628 1395 aa14.2□□□□□ -0.14
RFFL-203ENST00000413582 ARHGEF28Q8N1W1 1705 aaKnown RBP14.19□□□□□ -0.14
RFFL-203ENST00000413582 TRAK1Q9UPV9 953 aa14.19□□□□□ -0.14
RFFL-203ENST00000413582 WASLO00401 505 aaPredicted RBP14.18□□□□□ -0.14
RFFL-203ENST00000413582 TRIM37O94972 964 aa14.18□□□□□ -0.14
RFFL-203ENST00000413582 NRKQ7Z2Y5 1582 aa14.17□□□□□ -0.14
RFFL-203ENST00000413582 TOPAZ1Q8N9V7 1692 aa14.17□□□□□ -0.14
RFFL-203ENST00000413582 FAM196AQ6ZSG2 479 aa14.17□□□□□ -0.14
RFFL-203ENST00000413582 PAK3O75914 559 aaPredicted RBP14.16□□□□□ -0.14
RFFL-203ENST00000413582 CHRNA2Q15822 529 aa14.16□□□□□ -0.14
RFFL-203ENST00000413582 NGDNQ8NEJ9 315 aaKnown RBP14.16□□□□□ -0.14
RFFL-203ENST00000413582 LMO7Q8WWI1 1683 aa14.16□□□□□ -0.14
RFFL-203ENST00000413582 SSH2Q76I76 1423 aa14.15□□□□□ -0.14
RFFL-203ENST00000413582 APBA3O96018 575 aa14.14□□□□□ -0.15
RFFL-203ENST00000413582 STRN4Q9NRL3 753 aa14.14□□□□□ -0.15
RFFL-203ENST00000413582 CAMTA1Q9Y6Y1 1673 aa14.14□□□□□ -0.15
RFFL-203ENST00000413582 BARGINQ6ZT62 677 aa14.13□□□□□ -0.15
RFFL-203ENST00000413582 PARP4Q9UKK3 1724 aaKnown RBP14.12□□□□□ -0.15
RFFL-203ENST00000413582 POLR3AO14802 1390 aaPredicted RBP14.12□□□□□ -0.15
RFFL-203ENST00000413582 ZC3H6P61129 1189 aaKnown RBP14.12□□□□□ -0.15
RFFL-203ENST00000413582 USP35Q9P2H5 1018 aa14.11□□□□□ -0.15
RFFL-203ENST00000413582 RGPD3A6NKT7 1758 aaPredicted RBP14.11□□□□□ -0.15
RFFL-203ENST00000413582 RGPD4Q7Z3J3 1758 aa14.11□□□□□ -0.15
RFFL-203ENST00000413582 CPDO75976 1380 aa14.1□□□□□ -0.15
RFFL-203ENST00000413582 YY1P25490 414 aa14.1□□□□□ -0.15
RFFL-203ENST00000413582 NUTM2GQ5VZR2 741 aa14.1□□□□□ -0.15
RFFL-203ENST00000413582 NUDT16Q96DE0 195 aaKnown RBP14.1□□□□□ -0.15
RFFL-203ENST00000413582 PEAK1Q9H792 1746 aa14.1□□□□□ -0.15
RFFL-203ENST00000413582 PDE3BQ13370 1112 aa14.09□□□□□ -0.15
RFFL-203ENST00000413582 LARP1Q6PKG0 1096 aaKnown RBP14.09□□□□□ -0.15
RFFL-203ENST00000413582 USP19O94966 1318 aa14.09□□□□□ -0.15
RFFL-203ENST00000413582 RAB3GAP2Q9H2M9 1393 aa14.09□□□□□ -0.15
RFFL-203ENST00000413582 TCP11L2Q8N4U5 519 aa14.08□□□□□ -0.16
RFFL-203ENST00000413582 DCAF11Q8TEB1 546 aa14.08□□□□□ -0.16
RFFL-203ENST00000413582 KDM2AQ9Y2K7 1162 aa14.08□□□□□ -0.16
RFFL-203ENST00000413582 SBF2Q86WG5 1849 aa14.08□□□□□ -0.16
RFFL-203ENST00000413582 LRRC37A3O60309 1634 aa14.08□□□□□ -0.16
RFFL-203ENST00000413582 NINLQ9Y2I6 1382 aa14.08□□□□□ -0.16
RFFL-203ENST00000413582 COL5A2P05997 1499 aaPredicted RBP14.07□□□□□ -0.16
RFFL-203ENST00000413582 NBPF8Q3BBV2 869 aa14.07□□□□□ -0.16
RFFL-203ENST00000413582 NBPF14Q5TI25 921 aa14.07□□□□□ -0.16
RFFL-203ENST00000413582 ACEP12821 1306 aa14.07□□□□□ -0.16
RFFL-203ENST00000413582 CASZ1Q86V15 1759 aa14.06□□□□□ -0.16
RFFL-203ENST00000413582 EVA1CP58658 441 aa14.06□□□□□ -0.16
RFFL-203ENST00000413582 SPON1Q9HCB6 807 aa14.06□□□□□ -0.16
RFFL-203ENST00000413582 WNK3Q9BYP7 1800 aa14.06□□□□□ -0.16
RFFL-203ENST00000413582 STAC3Q96MF2 364 aa14.05□□□□□ -0.16
RFFL-203ENST00000413582 CDK19Q9BWU1 502 aa14.05□□□□□ -0.16
RFFL-203ENST00000413582 THRAP3Q9Y2W1 955 aaKnown RBP14.05□□□□□ -0.16
RFFL-203ENST00000413582 OVOS2A0A0G2JMS6 1433 aa14.05□□□□□ -0.16
RFFL-203ENST00000413582 OVOS2A0A0J9YW53 1432 aa14.05□□□□□ -0.16
RFFL-203ENST00000413582 OVOS2Q6IE36 1432 aa14.05□□□□□ -0.16
RFFL-203ENST00000413582 KIAA1210Q9ULL0 1709 aa14.04□□□□□ -0.16
RFFL-203ENST00000413582 PLEKHG3A1L390 1219 aa14.04□□□□□ -0.16
RFFL-203ENST00000413582 KCNQ2O43526 872 aa14.04□□□□□ -0.16
RFFL-203ENST00000413582 ABTB2Q8N961 1025 aa14.03□□□□□ -0.16
RFFL-203ENST00000413582 PPP1R1BQ9UD71 204 aaPredicted RBP14.03□□□□□ -0.16
RFFL-203ENST00000413582 CCDC61Q9Y6R9 512 aa14.03□□□□□ -0.16
RFFL-203ENST00000413582 CRB1P82279 1406 aa14.03□□□□□ -0.16
RFFL-203ENST00000413582 SLIT3O75094 1523 aa14.02□□□□□ -0.16
RFFL-203ENST00000413582 ANO8Q9HCE9 1232 aaPredicted RBP14.02□□□□□ -0.17
RFFL-203ENST00000413582 C11orf95C9JLR9 678 aaPredicted RBP14.01□□□□□ -0.17
RFFL-203ENST00000413582 GCP02774 474 aa14.01□□□□□ -0.17
RFFL-203ENST00000413582 MYOM1P52179 1685 aa14.01□□□□□ -0.17
RFFL-203ENST00000413582 PPIP5K1Q6PFW1 1433 aa14□□□□□ -0.17
RFFL-203ENST00000413582 COL18A1P39060 1754 aa14□□□□□ -0.17
RFFL-203ENST00000413582 AKAP12Q02952 1782 aa14□□□□□ -0.17
RFFL-203ENST00000413582 NLRP13Q86W25 1043 aa13.99□□□□□ -0.17
RFFL-203ENST00000413582 AATKQ6ZMQ8 1374 aa13.98□□□□□ -0.17
RFFL-203ENST00000413582 PIK3C2AO00443 1686 aa13.98□□□□□ -0.17
RFFL-203ENST00000413582 PLSCR1O15162 318 aa13.98□□□□□ -0.17
RFFL-203ENST00000413582 USP6P35125 1406 aa13.98□□□□□ -0.17
RFFL-203ENST00000413582 BRD4O60885 1362 aaPredicted RBP13.97□□□□□ -0.17
RFFL-203ENST00000413582 PTF1AQ7RTS3 328 aa13.97□□□□□ -0.17
RFFL-203ENST00000413582 QRICH2Q9H0J4 1663 aa13.97□□□□□ -0.17
RFFL-203ENST00000413582 BCL9O00512 1426 aa13.97□□□□□ -0.17
RFFL-203ENST00000413582 DCAF8L1A6NGE4 600 aa13.96□□□□□ -0.17
RFFL-203ENST00000413582 PDGFDQ9GZP0 370 aaPredicted RBP13.96□□□□□ -0.17
RFFL-203ENST00000413582 ADRA2BP18089 450 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms