RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 CD46P15529 392 aa9.21□□□□□ -0.94
NOD1-203ENST00000413433 MYT1Q01538 1121 aa9.21□□□□□ -0.94
NOD1-203ENST00000413433 KCNA1Q09470 495 aa9.21□□□□□ -0.94
NOD1-203ENST00000413433 FOXD4L5Q5VV16 416 aaPredicted RBP9.21□□□□□ -0.94
NOD1-203ENST00000413433 TRIM67Q6ZTA4 783 aa9.21□□□□□ -0.94
NOD1-203ENST00000413433 FOXD4L4Q8WXT5 416 aaPredicted RBP9.21□□□□□ -0.94
NOD1-203ENST00000413433 USTQ9Y2C2 406 aa9.21□□□□□ -0.94
NOD1-203ENST00000413433 NDUFB9Q9Y6M9 179 aa9.21□□□□□ -0.94
NOD1-203ENST00000413433 ZPR1O75312 459 aa9.2□□□□□ -0.94
NOD1-203ENST00000413433 RFX1P22670 979 aa9.2□□□□□ -0.94
NOD1-203ENST00000413433 SLC19A1P41440 591 aa9.2□□□□□ -0.94
NOD1-203ENST00000413433 SLF2Q8IX21 1173 aa9.2□□□□□ -0.94
NOD1-203ENST00000413433 RCCD1A6NED2 376 aa9.19□□□□□ -0.94
NOD1-203ENST00000413433 MOXD2PA6NHM9 499 aa9.19□□□□□ -0.94
NOD1-203ENST00000413433 DDX11L8A8MPP1 907 aa9.19□□□□□ -0.94
NOD1-203ENST00000413433 BRD1O95696 1058 aa9.19□□□□□ -0.94
NOD1-203ENST00000413433 SLC4A3P48751 1232 aa9.19□□□□□ -0.94
NOD1-203ENST00000413433 QPCTQ16769 361 aa9.19□□□□□ -0.94
NOD1-203ENST00000413433 EYA1Q99502 592 aa9.19□□□□□ -0.94
NOD1-203ENST00000413433 URB2Q14146 1524 aaKnown RBP9.19□□□□□ -0.94
NOD1-203ENST00000413433 LILRB3O75022 631 aa9.18□□□□□ -0.94
NOD1-203ENST00000413433 GJA5P36382 358 aa9.18□□□□□ -0.94
NOD1-203ENST00000413433 PRR20EP86478 221 aa9.18□□□□□ -0.94
NOD1-203ENST00000413433 PRR20CP86479 221 aa9.18□□□□□ -0.94
NOD1-203ENST00000413433 PRR20DP86480 221 aa9.18□□□□□ -0.94
NOD1-203ENST00000413433 PRR20BP86481 221 aa9.18□□□□□ -0.94
NOD1-203ENST00000413433 PRR20AP86496 221 aa9.18□□□□□ -0.94
NOD1-203ENST00000413433 WASHC4Q2M389 1173 aa9.18□□□□□ -0.94
NOD1-203ENST00000413433 HDGFL1Q5TGJ6 251 aa9.18□□□□□ -0.94
NOD1-203ENST00000413433 PRR14Q9BWN1 585 aa9.18□□□□□ -0.94
NOD1-203ENST00000413433 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.17□□□□□ -0.94
NOD1-203ENST00000413433 SWT1Q5T5J6 900 aaKnown RBP9.17□□□□□ -0.94
NOD1-203ENST00000413433 RNF223E7ERA6 249 aa9.16□□□□□ -0.94
NOD1-203ENST00000413433 NDUFV2P19404 249 aa9.16□□□□□ -0.94
NOD1-203ENST00000413433 SPRYD7Q5W111 196 aa9.16□□□□□ -0.94
NOD1-203ENST00000413433 ZNF598Q86UK7 904 aaKnown RBP9.16□□□□□ -0.94
NOD1-203ENST00000413433 TOP2AP11388 1531 aaKnown RBP9.15□□□□□ -0.94
NOD1-203ENST00000413433 RTL5Q5HYW3 569 aaPredicted RBP9.15□□□□□ -0.94
NOD1-203ENST00000413433 ZBTB3Q9H5J0 574 aa9.15□□□□□ -0.94
NOD1-203ENST00000413433 POTECB2RU33 542 aa9.14□□□□□ -0.95
NOD1-203ENST00000413433 DNAJB2P25686 324 aa9.14□□□□□ -0.95
NOD1-203ENST00000413433 PRPF38BQ5VTL8 546 aaKnown RBP9.14□□□□□ -0.95
NOD1-203ENST00000413433 TREML4Q6UXN2 200 aa9.14□□□□□ -0.95
NOD1-203ENST00000413433 RDH13Q8NBN7 331 aa9.14□□□□□ -0.95
NOD1-203ENST00000413433 CABLES1Q8TDN4 633 aa9.14□□□□□ -0.95
NOD1-203ENST00000413433 PCDHB3Q9Y5E6 796 aa9.14□□□□□ -0.95
NOD1-203ENST00000413433 PCDHB15Q9Y5E8 787 aa9.14□□□□□ -0.95
NOD1-203ENST00000413433 CCDC88BA6NC98 1476 aa9.14□□□□□ -0.95
NOD1-203ENST00000413433 ZNF608Q9ULD9 1512 aaPredicted RBP9.12□□□□□ -0.95
NOD1-203ENST00000413433 ANKLE1Q8NAG6 615 aa9.12□□□□□ -0.95
NOD1-203ENST00000413433 EMID1Q96A84 441 aaPredicted RBP9.12□□□□□ -0.95
NOD1-203ENST00000413433 FAM187AA6NFU0 413 aa9.11□□□□□ -0.95
NOD1-203ENST00000413433 E9PSI1 815 aa9.11□□□□□ -0.95
NOD1-203ENST00000413433 CFAP70Q5T0N1 1121 aa9.11□□□□□ -0.95
NOD1-203ENST00000413433 ZNF428Q96B54 188 aa9.11□□□□□ -0.95
NOD1-203ENST00000413433 PPP1R12CQ9BZL4 782 aa9.11□□□□□ -0.95
NOD1-203ENST00000413433 KDM4AO75164 1064 aa9.1□□□□□ -0.95
NOD1-203ENST00000413433 CCDC27Q2M243 656 aa9.1□□□□□ -0.95
NOD1-203ENST00000413433 ZNF697Q5TEC3 545 aa9.1□□□□□ -0.95
NOD1-203ENST00000413433 HELBQ8NG08 1087 aaPredicted RBP9.1□□□□□ -0.95
NOD1-203ENST00000413433 ADAMTS19Q8TE59 1207 aa9.1□□□□□ -0.95
NOD1-203ENST00000413433 GJD4Q96KN9 370 aaPredicted RBP9.1□□□□□ -0.95
NOD1-203ENST00000413433 VAC14Q08AM6 782 aa9.09□□□□□ -0.95
NOD1-203ENST00000413433 CYB5RLQ6IPT4 315 aa9.09□□□□□ -0.95
NOD1-203ENST00000413433 BLOC1S3Q6QNY0 202 aa9.09□□□□□ -0.95
NOD1-203ENST00000413433 TSC1Q92574 1164 aa9.09□□□□□ -0.95
NOD1-203ENST00000413433 FDX1P10109 184 aa9.08□□□□□ -0.96
NOD1-203ENST00000413433 LMOD1P29536 600 aaPredicted RBP9.08□□□□□ -0.96
NOD1-203ENST00000413433 USP46P62068 366 aa9.08□□□□□ -0.96
NOD1-203ENST00000413433 LCE2AQ5TA79 106 aaPredicted RBP9.08□□□□□ -0.96
NOD1-203ENST00000413433 RSPH4AQ5TD94 716 aa9.08□□□□□ -0.96
NOD1-203ENST00000413433 TMEM134Q9H6X4 195 aa9.08□□□□□ -0.96
NOD1-203ENST00000413433 IVNS1ABPQ9Y6Y0 642 aa9.08□□□□□ -0.96
NOD1-203ENST00000413433 PALM3A6NDB9 673 aaPredicted RBP9.07□□□□□ -0.96
NOD1-203ENST00000413433 GDF9O60383 454 aa9.07□□□□□ -0.96
NOD1-203ENST00000413433 AQRO60306 1485 aaKnown RBP eCLIP9.07□□□□□ -0.963e-7■■■□□ 17
NOD1-203ENST00000413433 IFT140Q96RY7 1462 aa9.07□□□□□ -0.96
NOD1-203ENST00000413433 TNFRSF10AO00220 468 aa9.06□□□□□ -0.96
NOD1-203ENST00000413433 LIAT1Q6ZQX7 453 aa9.06□□□□□ -0.96
NOD1-203ENST00000413433 HMX1Q9NP08 348 aaPredicted RBP9.06□□□□□ -0.96
NOD1-203ENST00000413433 TOPBP1Q92547 1522 aa9.05□□□□□ -0.96
NOD1-203ENST00000413433 HOXA2O43364 376 aa9.05□□□□□ -0.96
NOD1-203ENST00000413433 SOX11P35716 441 aa9.05□□□□□ -0.96
NOD1-203ENST00000413433 CTDSPL2Q05D32 466 aa9.05□□□□□ -0.96
NOD1-203ENST00000413433 SND1Q7KZF4 910 aaKnown RBP eCLIP9.05□□□□□ -0.96
NOD1-203ENST00000413433 VRTNQ9H8Y1 702 aa9.05□□□□□ -0.96
NOD1-203ENST00000413433 CARNS1A5YM72 827 aa9.04□□□□□ -0.96
NOD1-203ENST00000413433 TLL1O43897 1013 aa9.04□□□□□ -0.96
NOD1-203ENST00000413433 SRPK2P78362 688 aaKnown RBP9.04□□□□□ -0.96
NOD1-203ENST00000413433 AAASQ9NRG9 546 aa9.04□□□□□ -0.96
NOD1-203ENST00000413433 PPEF1O14829 653 aaPredicted RBP9.03□□□□□ -0.96
NOD1-203ENST00000413433 ST8SIA5O15466 376 aa9.03□□□□□ -0.96
NOD1-203ENST00000413433 S1PR4O95977 384 aa9.03□□□□□ -0.96
NOD1-203ENST00000413433 MTMR2Q13614 643 aa9.03□□□□□ -0.96
NOD1-203ENST00000413433 B4GALNT3Q6L9W6 998 aa9.03□□□□□ -0.96
NOD1-203ENST00000413433 TRIM34Q9BYJ4 488 aa9.03□□□□□ -0.96
NOD1-203ENST00000413433 ALG2Q9H553 416 aa9.03□□□□□ -0.96
NOD1-203ENST00000413433 AMOTL2Q9Y2J4 779 aa9.03□□□□□ -0.96
NOD1-203ENST00000413433 RIMBP3CA6NJZ7 1639 aa9.02□□□□□ -0.96
NOD1-203ENST00000413433 RIMBP3BA6NNM3 1639 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms