RNA–Protein interactions for RNA: ENST00000413366.7

PRKCA-202, Transcript of protein kinase C alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCA, Length 8,751 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-202ENST00000413366 RALYLQ86SE5 291 aaKnown RBP9.09□□□□□ -0.95
PRKCA-202ENST00000413366 PRDM11Q9NQV5 511 aa9.09□□□□□ -0.95
PRKCA-202ENST00000413366 FOXD4L1Q9NU39 408 aa9.09□□□□□ -0.95
PRKCA-202ENST00000413366 TTC39AQ5SRH9 613 aa9.09□□□□□ -0.95
PRKCA-202ENST00000413366 GAS2L2Q8NHY3 880 aa9.09□□□□□ -0.95
PRKCA-202ENST00000413366 SPDYE4A6NLX3 237 aa9.09□□□□□ -0.95
PRKCA-202ENST00000413366 ST20-MTHFSA0A0A6YYL1 179 aa9.09□□□□□ -0.95
PRKCA-202ENST00000413366 FOXD4L5Q5VV16 416 aaPredicted RBP9.09□□□□□ -0.95
PRKCA-202ENST00000413366 FOXD4L4Q8WXT5 416 aaPredicted RBP9.09□□□□□ -0.95
PRKCA-202ENST00000413366 E9PSI1 815 aa9.08□□□□□ -0.96
PRKCA-202ENST00000413366 CCDC173Q0VFZ6 552 aa9.08□□□□□ -0.96
PRKCA-202ENST00000413366 BECN2A8MW95 431 aa9.08□□□□□ -0.96
PRKCA-202ENST00000413366 SART3Q15020 963 aaKnown RBP9.08□□□□□ -0.96
PRKCA-202ENST00000413366 API5Q9BZZ5 524 aaKnown RBP9.08□□□□□ -0.96
PRKCA-202ENST00000413366 IPO7O95373 1038 aaKnown RBP9.08□□□□□ -0.96
PRKCA-202ENST00000413366 ZPR1O75312 459 aa9.08□□□□□ -0.96
PRKCA-202ENST00000413366 FAM161AQ3B820 660 aa9.08□□□□□ -0.96
PRKCA-202ENST00000413366 GNAI1P63096 354 aa9.08□□□□□ -0.96
PRKCA-202ENST00000413366 GTPBP4Q9BZE4 634 aaKnown RBP9.08□□□□□ -0.96
PRKCA-202ENST00000413366 NINLQ9Y2I6 1382 aa9.07□□□□□ -0.96
PRKCA-202ENST00000413366 TMOD2Q9NZR1 351 aa9.07□□□□□ -0.96
PRKCA-202ENST00000413366 BCCIPQ9P287 314 aaKnown RBP eCLIP9.07□□□□□ -0.964e-8■■■□□ 14.8
PRKCA-202ENST00000413366 ZSCAN29Q8IWY8 852 aaPredicted RBP9.07□□□□□ -0.96
PRKCA-202ENST00000413366 CCDC39Q9UFE4 941 aa9.07□□□□□ -0.96
PRKCA-202ENST00000413366 DDX49Q9Y6V7 483 aaKnown RBP9.07□□□□□ -0.96
PRKCA-202ENST00000413366 CLCN1P35523 988 aa9.07□□□□□ -0.96
PRKCA-202ENST00000413366 BICDL1Q6ZP65 573 aa9.07□□□□□ -0.96
PRKCA-202ENST00000413366 PLEKHH2Q8IVE3 1493 aa9.07□□□□□ -0.96
PRKCA-202ENST00000413366 NGLY1Q96IV0 654 aa9.07□□□□□ -0.96
PRKCA-202ENST00000413366 ADAMTS2O95450 1211 aa9.07□□□□□ -0.96
PRKCA-202ENST00000413366 CCDC30Q5VVM6 783 aa9.06□□□□□ -0.96
PRKCA-202ENST00000413366 CAVIN1Q6NZI2 390 aaKnown RBP9.06□□□□□ -0.96
PRKCA-202ENST00000413366 HOMER1Q86YM7 354 aa9.06□□□□□ -0.96
PRKCA-202ENST00000413366 SMAP1Q8IYB5 467 aaPredicted RBP9.06□□□□□ -0.96
PRKCA-202ENST00000413366 CDK5RAP3Q96JB5 506 aa9.06□□□□□ -0.96
PRKCA-202ENST00000413366 CENPQQ7L2Z9 268 aaPredicted RBP9.06□□□□□ -0.96
PRKCA-202ENST00000413366 ERCC4Q92889 916 aaPredicted RBP9.06□□□□□ -0.96
PRKCA-202ENST00000413366 BCL2L13Q9BXK5 485 aa9.06□□□□□ -0.96
PRKCA-202ENST00000413366 UBTFL1P0CB47 393 aaPredicted RBP9.06□□□□□ -0.96
PRKCA-202ENST00000413366 TMEM87AQ8NBN3 555 aa9.06□□□□□ -0.96
PRKCA-202ENST00000413366 LEKR1Q6ZMV7 388 aa9.05□□□□□ -0.96
PRKCA-202ENST00000413366 CCDC158Q5M9N0 1113 aa9.05□□□□□ -0.96
PRKCA-202ENST00000413366 STAC3Q96MF2 364 aa9.05□□□□□ -0.96
PRKCA-202ENST00000413366 USP47Q96K76 1375 aa9.05□□□□□ -0.96
PRKCA-202ENST00000413366 ZFYVE27Q5T4F4 411 aa9.05□□□□□ -0.96
PRKCA-202ENST00000413366 ZNF652Q9Y2D9 606 aa9.05□□□□□ -0.96
PRKCA-202ENST00000413366 HSP90AB3PQ58FF7 597 aa9.05□□□□□ -0.96
PRKCA-202ENST00000413366 MNS1Q8NEH6 495 aa9.05□□□□□ -0.96
PRKCA-202ENST00000413366 MPHOSPH8Q99549 860 aa9.05□□□□□ -0.96
PRKCA-202ENST00000413366 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.05□□□□□ -0.966e-7■■■■□ 21.6
PRKCA-202ENST00000413366 SNAPC4Q5SXM2 1469 aa9.04□□□□□ -0.96
PRKCA-202ENST00000413366 TMEM132EQ6IEE7 984 aa9.04□□□□□ -0.96
PRKCA-202ENST00000413366 MTHFSP49914 203 aa9.04□□□□□ -0.96
PRKCA-202ENST00000413366 ZRSR2Q15696 482 aaKnown RBP9.04□□□□□ -0.96
PRKCA-202ENST00000413366 NEFHP12036 1026 aa9.04□□□□□ -0.96
PRKCA-202ENST00000413366 IBSPP21815 317 aaPredicted RBP9.04□□□□□ -0.96
PRKCA-202ENST00000413366 RUNDC1Q96C34 613 aa9.04□□□□□ -0.96
PRKCA-202ENST00000413366 PRAM1Q96QH2 718 aa9.04□□□□□ -0.96
PRKCA-202ENST00000413366 DYNC1I1O14576 645 aa9.04□□□□□ -0.96
PRKCA-202ENST00000413366 FOSBP53539 338 aa9.03□□□□□ -0.96
PRKCA-202ENST00000413366 DDX19BQ9UMR2 479 aa9.03□□□□□ -0.96
PRKCA-202ENST00000413366 ZSCAN30Q86W11 494 aa9.03□□□□□ -0.96
PRKCA-202ENST00000413366 REC8O95072 547 aa9.03□□□□□ -0.96
PRKCA-202ENST00000413366 RBM28Q9NW13 759 aaKnown RBP9.03□□□□□ -0.96
PRKCA-202ENST00000413366 LRPPRCP42704 1394 aaKnown RBP9.03□□□□□ -0.96
PRKCA-202ENST00000413366 GGNBP2Q9H3C7 697 aa9.03□□□□□ -0.96
PRKCA-202ENST00000413366 INCENPQ9NQS7 918 aa9.03□□□□□ -0.96
PRKCA-202ENST00000413366 CHMP5Q9NZZ3 219 aa9.03□□□□□ -0.96
PRKCA-202ENST00000413366 MYCNP04198 464 aaPredicted RBP9.03□□□□□ -0.96
PRKCA-202ENST00000413366 TRIM21P19474 475 aaKnown RBP9.03□□□□□ -0.96
PRKCA-202ENST00000413366 MCM5P33992 734 aa9.03□□□□□ -0.96
PRKCA-202ENST00000413366 XPCQ01831 940 aaPredicted RBP9.03□□□□□ -0.96
PRKCA-202ENST00000413366 KRT18P05783 430 aaKnown RBP9.02□□□□□ -0.96
PRKCA-202ENST00000413366 HECW1Q76N89 1606 aa9.02□□□□□ -0.97
PRKCA-202ENST00000413366 NAP1L1P55209 391 aaKnown RBP9.02□□□□□ -0.97
PRKCA-202ENST00000413366 PLCD4Q9BRC7 762 aa9.02□□□□□ -0.97
PRKCA-202ENST00000413366 STARD3NLO95772 234 aa9.02□□□□□ -0.97
PRKCA-202ENST00000413366 MATR3P43243 847 aaKnown RBP eCLIP9.02□□□□□ -0.972e-6■■■■□ 21.8
PRKCA-202ENST00000413366 HSP90AB2PQ58FF8 381 aa9.02□□□□□ -0.97
PRKCA-202ENST00000413366 PNISRQ8TF01 805 aaKnown RBP9.02□□□□□ -0.97
PRKCA-202ENST00000413366 ZNF692Q9BU19 519 aaPredicted RBP9.02□□□□□ -0.97
PRKCA-202ENST00000413366 NASPP49321 788 aaPredicted RBP9.02□□□□□ -0.97
PRKCA-202ENST00000413366 PPM1FP49593 454 aaPredicted RBP9.02□□□□□ -0.97
PRKCA-202ENST00000413366 DYDC1Q8WWB3 177 aa9.02□□□□□ -0.97
PRKCA-202ENST00000413366 RTEL1-TNFRSF6BF6WH68 1400 aa9.02□□□□□ -0.97
PRKCA-202ENST00000413366 AFAP1Q8N556 730 aa9.02□□□□□ -0.97
PRKCA-202ENST00000413366 CDK19Q9BWU1 502 aa9.02□□□□□ -0.97
PRKCA-202ENST00000413366 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.01□□□□□ -0.97
PRKCA-202ENST00000413366 EPRSP07814 1512 aaKnown RBP9.01□□□□□ -0.97
PRKCA-202ENST00000413366 IGHMBP2P38935 993 aaKnown RBP9.01□□□□□ -0.97
PRKCA-202ENST00000413366 CNTROBQ8N137 903 aa9.01□□□□□ -0.97
PRKCA-202ENST00000413366 MYO6Q9UM54 1294 aa9.01□□□□□ -0.97
PRKCA-202ENST00000413366 GOLGA6L7A0A1B0GV03 622 aa9.01□□□□□ -0.97
PRKCA-202ENST00000413366 RPGRQ92834 1020 aaKnown RBP9.01□□□□□ -0.97
PRKCA-202ENST00000413366 IFT57Q9NWB7 429 aa9.01□□□□□ -0.97
PRKCA-202ENST00000413366 KDM4AO75164 1064 aa9.01□□□□□ -0.97
PRKCA-202ENST00000413366 MYL6BP14649 208 aa9.01□□□□□ -0.97
PRKCA-202ENST00000413366 TERF1P54274 439 aa9.01□□□□□ -0.97
PRKCA-202ENST00000413366 IPO4Q8TEX9 1081 aaKnown RBP9.01□□□□□ -0.97
PRKCA-202ENST00000413366 BCL11BQ9C0K0 894 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms