RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 PHRF1Q9P1Y6 1649 aaKnown RBP14.51□□□□□ -0.09
SMARCAL1-204ENST00000412913 ESCO1Q5FWF5 840 aa14.5□□□□□ -0.09
SMARCAL1-204ENST00000412913 BRINP3Q76B58 766 aa14.5□□□□□ -0.09
SMARCAL1-204ENST00000412913 MED1Q15648 1581 aaPredicted RBP14.5□□□□□ -0.09
SMARCAL1-204ENST00000412913 BRD4O60885 1362 aaPredicted RBP14.49□□□□□ -0.09
SMARCAL1-204ENST00000412913 COL16A1Q07092 1604 aaPredicted RBP14.49□□□□□ -0.09
SMARCAL1-204ENST00000412913 PHLPP1O60346 1717 aa14.49□□□□□ -0.09
SMARCAL1-204ENST00000412913 TTC21BQ7Z4L5 1316 aa14.48□□□□□ -0.09
SMARCAL1-204ENST00000412913 ZNF692Q9BU19 519 aaPredicted RBP14.48□□□□□ -0.09
SMARCAL1-204ENST00000412913 SLAIN2Q9P270 581 aa14.48□□□□□ -0.09
SMARCAL1-204ENST00000412913 KNSTRNQ9Y448 316 aa14.48□□□□□ -0.09
SMARCAL1-204ENST00000412913 CGNL1Q0VF96 1302 aa14.47□□□□□ -0.09
SMARCAL1-204ENST00000412913 SLIT3O75094 1523 aa14.47□□□□□ -0.09
SMARCAL1-204ENST00000412913 NGDNQ8NEJ9 315 aaKnown RBP14.47□□□□□ -0.09
SMARCAL1-204ENST00000412913 PRKRIP1Q9H875 184 aaPredicted RBP14.47□□□□□ -0.09
SMARCAL1-204ENST00000412913 TTC21AQ8NDW8 1320 aa14.46□□□□□ -0.09
SMARCAL1-204ENST00000412913 COL22A1Q8NFW1 1626 aaPredicted RBP14.45□□□□□ -0.1
SMARCAL1-204ENST00000412913 FYB1O15117 783 aa14.45□□□□□ -0.1
SMARCAL1-204ENST00000412913 CC2D1BQ5T0F9 858 aaKnown RBP14.45□□□□□ -0.1
SMARCAL1-204ENST00000412913 TNS3Q68CZ2 1445 aa14.45□□□□□ -0.1
SMARCAL1-204ENST00000412913 CERKQ8TCT0 537 aa14.45□□□□□ -0.1
SMARCAL1-204ENST00000412913 DDX17Q92841 729 aaKnown RBP14.45□□□□□ -0.1
SMARCAL1-204ENST00000412913 NFAT5O94916 1531 aa14.45□□□□□ -0.1
SMARCAL1-204ENST00000412913 SBNO1A3KN83 1393 aa14.45□□□□□ -0.1
SMARCAL1-204ENST00000412913 USP31Q70CQ4 1352 aa14.45□□□□□ -0.1
SMARCAL1-204ENST00000412913 LTN1O94822 1766 aa14.45□□□□□ -0.1
SMARCAL1-204ENST00000412913 NPHP3Q7Z494 1330 aa14.44□□□□□ -0.1
SMARCAL1-204ENST00000412913 PEAK1Q9H792 1746 aa14.44□□□□□ -0.1
SMARCAL1-204ENST00000412913 MAP2P11137 1827 aaKnown RBP14.44□□□□□ -0.1
SMARCAL1-204ENST00000412913 FOXO3O43524 673 aa14.44□□□□□ -0.1
SMARCAL1-204ENST00000412913 NME9Q86XW9 330 aa14.44□□□□□ -0.1
SMARCAL1-204ENST00000412913 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.44□□□□□ -0.1
SMARCAL1-204ENST00000412913 MIER1Q8N108 512 aa14.44□□□□□ -0.1
SMARCAL1-204ENST00000412913 SHPRHQ149N8 1683 aa14.43□□□□□ -0.1
SMARCAL1-204ENST00000412913 SMG6Q86US8 1419 aaKnown RBP14.43□□□□□ -0.1
SMARCAL1-204ENST00000412913 ANP32CO43423 234 aa14.43□□□□□ -0.1
SMARCAL1-204ENST00000412913 SOS2Q07890 1332 aaPredicted RBP14.42□□□□□ -0.1
SMARCAL1-204ENST00000412913 XPCQ01831 940 aaPredicted RBP14.42□□□□□ -0.1
SMARCAL1-204ENST00000412913 GGNBP2Q9H3C7 697 aa14.42□□□□□ -0.1
SMARCAL1-204ENST00000412913 ZRANB1Q9UGI0 708 aa14.42□□□□□ -0.1
SMARCAL1-204ENST00000412913 CNGB1Q14028 1251 aaPredicted RBP14.4□□□□□ -0.1
SMARCAL1-204ENST00000412913 RALBP1Q15311 655 aa14.4□□□□□ -0.1
SMARCAL1-204ENST00000412913 KRT28Q7Z3Y7 464 aa14.4□□□□□ -0.1
SMARCAL1-204ENST00000412913 USP19O94966 1318 aa14.4□□□□□ -0.1
SMARCAL1-204ENST00000412913 MYBBP1AQ9BQG0 1328 aaKnown RBP14.4□□□□□ -0.1
SMARCAL1-204ENST00000412913 COL3A1P02461 1466 aaPredicted RBP14.39□□□□□ -0.11
SMARCAL1-204ENST00000412913 PSME1Q06323 249 aa14.39□□□□□ -0.11
SMARCAL1-204ENST00000412913 SCAF1Q9H7N4 1312 aaKnown RBP14.39□□□□□ -0.11
SMARCAL1-204ENST00000412913 TOM1O60784 492 aa14.38□□□□□ -0.11
SMARCAL1-204ENST00000412913 SPATA31A3Q5VYP0 1347 aa14.38□□□□□ -0.11
SMARCAL1-204ENST00000412913 AATKQ6ZMQ8 1374 aa14.37□□□□□ -0.11
SMARCAL1-204ENST00000412913 UBAP1LF5GYI3 381 aa14.37□□□□□ -0.11
SMARCAL1-204ENST00000412913 CDK12Q9NYV4 1490 aaPredicted RBP14.37□□□□□ -0.11
SMARCAL1-204ENST00000412913 ARHGEF10O15013 1369 aa14.36□□□□□ -0.11
SMARCAL1-204ENST00000412913 PPP2R1AP30153 589 aa14.36□□□□□ -0.11
SMARCAL1-204ENST00000412913 MORC1Q86VD1 984 aa14.36□□□□□ -0.11
SMARCAL1-204ENST00000412913 COL18A1P39060 1754 aa14.36□□□□□ -0.11
SMARCAL1-204ENST00000412913 PAK3O75914 559 aaPredicted RBP14.35□□□□□ -0.11
SMARCAL1-204ENST00000412913 CCDC184Q52MB2 194 aa14.35□□□□□ -0.11
SMARCAL1-204ENST00000412913 COG3Q96JB2 828 aa14.35□□□□□ -0.11
SMARCAL1-204ENST00000412913 RGPD5Q99666 1765 aa14.34□□□□□ -0.11
SMARCAL1-204ENST00000412913 LMO7Q8WWI1 1683 aa14.34□□□□□ -0.11
SMARCAL1-204ENST00000412913 CCER2I3L3R5 266 aa14.34□□□□□ -0.11
SMARCAL1-204ENST00000412913 NUTM2GQ5VZR2 741 aa14.34□□□□□ -0.11
SMARCAL1-204ENST00000412913 ABTB2Q8N961 1025 aa14.34□□□□□ -0.11
SMARCAL1-204ENST00000412913 RGPD1P0DJD0 1748 aa14.34□□□□□ -0.11
SMARCAL1-204ENST00000412913 ABCC6O95255 1503 aa14.34□□□□□ -0.11
SMARCAL1-204ENST00000412913 PNPLA6Q8IY17 1366 aa14.34□□□□□ -0.11
SMARCAL1-204ENST00000412913 PIP4K2BP78356 416 aa14.33□□□□□ -0.12
SMARCAL1-204ENST00000412913 NLRP13Q86W25 1043 aa14.33□□□□□ -0.12
SMARCAL1-204ENST00000412913 FBLN1P23142 703 aa14.32□□□□□ -0.12
SMARCAL1-204ENST00000412913 TNNT2P45379 298 aaPredicted RBP14.32□□□□□ -0.12
SMARCAL1-204ENST00000412913 NLRP6P59044 892 aa14.32□□□□□ -0.12
SMARCAL1-204ENST00000412913 CAMTA1Q9Y6Y1 1673 aa14.32□□□□□ -0.12
SMARCAL1-204ENST00000412913 EMILIN1Q9Y6C2 1016 aa14.3□□□□□ -0.12
SMARCAL1-204ENST00000412913 INSRP06213 1382 aa14.3□□□□□ -0.12
SMARCAL1-204ENST00000412913 PLCH1Q4KWH8 1693 aa14.3□□□□□ -0.12
SMARCAL1-204ENST00000412913 RRS1Q15050 365 aaKnown RBP14.29□□□□□ -0.12
SMARCAL1-204ENST00000412913 POLKQ9UBT6 870 aa14.29□□□□□ -0.12
SMARCAL1-204ENST00000412913 RTL1A6NKG5 1358 aa14.29□□□□□ -0.12
SMARCAL1-204ENST00000412913 FAM208AQ9UK61 1670 aaKnown RBP14.29□□□□□ -0.12
SMARCAL1-204ENST00000412913 RGPD2P0DJD1 1756 aa14.29□□□□□ -0.12
SMARCAL1-204ENST00000412913 MAP3K19Q56UN5 1328 aa14.28□□□□□ -0.12
SMARCAL1-204ENST00000412913 COL14A1Q05707 1796 aaKnown RBP14.27□□□□□ -0.12
SMARCAL1-204ENST00000412913 NRAPQ86VF7 1730 aa14.27□□□□□ -0.12
SMARCAL1-204ENST00000412913 KIF24Q5T7B8 1368 aa14.27□□□□□ -0.12
SMARCAL1-204ENST00000412913 MTHFSP49914 203 aa14.27□□□□□ -0.13
SMARCAL1-204ENST00000412913 LMOD2Q6P5Q4 547 aa14.27□□□□□ -0.13
SMARCAL1-204ENST00000412913 CPDO75976 1380 aa14.26□□□□□ -0.13
SMARCAL1-204ENST00000412913 FLT4P35916 1363 aa14.26□□□□□ -0.13
SMARCAL1-204ENST00000412913 SOX12O15370 315 aa14.26□□□□□ -0.13
SMARCAL1-204ENST00000412913 GCP02774 474 aa14.26□□□□□ -0.13
SMARCAL1-204ENST00000412913 LRRC59Q96AG4 307 aaKnown RBP14.26□□□□□ -0.13
SMARCAL1-204ENST00000412913 MRS2Q9HD23 443 aa14.26□□□□□ -0.13
SMARCAL1-204ENST00000412913 KCNH5Q8NCM2 988 aa14.25□□□□□ -0.13
SMARCAL1-204ENST00000412913 CABLES1Q8TDN4 633 aa14.25□□□□□ -0.13
SMARCAL1-204ENST00000412913 LRP6O75581 1613 aa14.24□□□□□ -0.13
SMARCAL1-204ENST00000412913 ARHGEF25Q86VW2 580 aa14.24□□□□□ -0.13
SMARCAL1-204ENST00000412913 NWD2Q9ULI1 1742 aa14.23□□□□□ -0.13
SMARCAL1-204ENST00000412913 BLMP54132 1417 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms