RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 BCL2L13Q9BXK5 485 aa12.86□□□□□ -0.35
SMPD4-203ENST00000412570 POLKQ9UBT6 870 aa12.86□□□□□ -0.35
SMPD4-203ENST00000412570 DMRT2Q9Y5R5 561 aa12.86□□□□□ -0.35
SMPD4-203ENST00000412570 SETBP1Q9Y6X0 1596 aa12.86□□□□□ -0.35
SMPD4-203ENST00000412570 A0A0G2JS52 829 aa12.85□□□□□ -0.35
SMPD4-203ENST00000412570 ELL2O00472 640 aaPredicted RBP12.85□□□□□ -0.35
SMPD4-203ENST00000412570 BRD4O60885 1362 aaPredicted RBP12.85□□□□□ -0.35
SMPD4-203ENST00000412570 DIAPH1O60610 1272 aaKnown RBP12.85□□□□□ -0.35
SMPD4-203ENST00000412570 DCTN1Q14203 1278 aa12.85□□□□□ -0.35
SMPD4-203ENST00000412570 KRT28Q7Z3Y7 464 aa12.83□□□□□ -0.35
SMPD4-203ENST00000412570 TCP11L2Q8N4U5 519 aa12.83□□□□□ -0.35
SMPD4-203ENST00000412570 SBNO2Q9Y2G9 1366 aa12.83□□□□□ -0.35
SMPD4-203ENST00000412570 PRKAR2BP31323 418 aa12.83□□□□□ -0.36
SMPD4-203ENST00000412570 C19orf44Q9H6X5 657 aa12.83□□□□□ -0.36
SMPD4-203ENST00000412570 MAPK8IP3Q9UPT6 1336 aa12.83□□□□□ -0.36
SMPD4-203ENST00000412570 NUDCQ9Y266 331 aa12.82□□□□□ -0.36
SMPD4-203ENST00000412570 SULT6B1Q6IMI4 303 aa12.82□□□□□ -0.36
SMPD4-203ENST00000412570 SPINK5Q9NQ38 1064 aaPredicted RBP12.82□□□□□ -0.36
SMPD4-203ENST00000412570 ARHGAP23Q9P227 1491 aa12.82□□□□□ -0.36
SMPD4-203ENST00000412570 KIAA1210Q9ULL0 1709 aa12.81□□□□□ -0.36
SMPD4-203ENST00000412570 LRRC59Q96AG4 307 aaKnown RBP12.81□□□□□ -0.36
SMPD4-203ENST00000412570 FAM83GA6ND36 823 aa12.81□□□□□ -0.36
SMPD4-203ENST00000412570 NUTM2BA6NNL0 878 aaPredicted RBP12.81□□□□□ -0.36
SMPD4-203ENST00000412570 NUTM2EB1AL46 878 aaPredicted RBP12.81□□□□□ -0.36
SMPD4-203ENST00000412570 NUTM2AQ8IVF1 878 aaPredicted RBP12.81□□□□□ -0.36
SMPD4-203ENST00000412570 ZNF692Q9BU19 519 aaPredicted RBP12.81□□□□□ -0.36
SMPD4-203ENST00000412570 LAMC1P11047 1609 aa12.8□□□□□ -0.36
SMPD4-203ENST00000412570 NEFMP07197 916 aa12.8□□□□□ -0.36
SMPD4-203ENST00000412570 CSB-PGBD3P0DP91 1061 aa12.8□□□□□ -0.36
SMPD4-203ENST00000412570 TSR2Q969E8 191 aaKnown RBP12.8□□□□□ -0.36
SMPD4-203ENST00000412570 SLIT1O75093 1534 aa12.8□□□□□ -0.36
SMPD4-203ENST00000412570 PHACTR3Q96KR7 559 aa12.8□□□□□ -0.36
SMPD4-203ENST00000412570 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-203ENST00000412570 CPS1P31327 1500 aa12.8□□□□□ -0.36
SMPD4-203ENST00000412570 MYOM1P52179 1685 aa12.79□□□□□ -0.36
SMPD4-203ENST00000412570 MIS18AQ9NYP9 233 aa12.79□□□□□ -0.36
SMPD4-203ENST00000412570 CD163L1Q9NR16 1453 aa12.79□□□□□ -0.36
SMPD4-203ENST00000412570 FRAT1Q92837 279 aaPredicted RBP12.79□□□□□ -0.36
SMPD4-203ENST00000412570 NKTRP30414 1462 aaKnown RBP12.78□□□□□ -0.36
SMPD4-203ENST00000412570 MAP3K19Q56UN5 1328 aa12.78□□□□□ -0.36
SMPD4-203ENST00000412570 ZNF428Q96B54 188 aa12.78□□□□□ -0.36
SMPD4-203ENST00000412570 ATP7BP35670 1465 aa12.78□□□□□ -0.36
SMPD4-203ENST00000412570 NEURL4Q96JN8 1562 aa12.78□□□□□ -0.36
SMPD4-203ENST00000412570 RIPK4P57078 832 aa12.78□□□□□ -0.36
SMPD4-203ENST00000412570 STRN4Q9NRL3 753 aa12.78□□□□□ -0.36
SMPD4-203ENST00000412570 ZBED9Q6R2W3 1325 aa12.78□□□□□ -0.36
SMPD4-203ENST00000412570 PELP1Q8IZL8 1130 aaKnown RBP12.77□□□□□ -0.36
SMPD4-203ENST00000412570 FAM135BQ49AJ0 1406 aa12.77□□□□□ -0.37
SMPD4-203ENST00000412570 SLAIN2Q9P270 581 aa12.77□□□□□ -0.37
SMPD4-203ENST00000412570 POLR1AO95602 1720 aaPredicted RBP12.77□□□□□ -0.37
SMPD4-203ENST00000412570 ADAMTS2O95450 1211 aa12.76□□□□□ -0.37
SMPD4-203ENST00000412570 PLEKHG3A1L390 1219 aa12.76□□□□□ -0.37
SMPD4-203ENST00000412570 MSH6P52701 1360 aa12.76□□□□□ -0.37
SMPD4-203ENST00000412570 NECTIN2Q92692 538 aa12.76□□□□□ -0.37
SMPD4-203ENST00000412570 CANXP27824 592 aaKnown RBP12.75□□□□□ -0.37
SMPD4-203ENST00000412570 EIF4A2Q14240 407 aaKnown RBP12.75□□□□□ -0.37
SMPD4-203ENST00000412570 RGPD8O14715 1765 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-203ENST00000412570 B4GALNT3Q6L9W6 998 aa12.75□□□□□ -0.37
SMPD4-203ENST00000412570 CADPS2Q86UW7 1296 aa12.75□□□□□ -0.37
SMPD4-203ENST00000412570 MCM10Q7L590 875 aa12.75□□□□□ -0.37
SMPD4-203ENST00000412570 CLUAP1Q96AJ1 413 aa12.75□□□□□ -0.37
SMPD4-203ENST00000412570 NLRP2Q9NX02 1062 aa12.75□□□□□ -0.37
SMPD4-203ENST00000412570 MED14O60244 1454 aa12.75□□□□□ -0.37
SMPD4-203ENST00000412570 LMTK3Q96Q04 1460 aa12.75□□□□□ -0.37
SMPD4-203ENST00000412570 RUNDC1Q96C34 613 aa12.74□□□□□ -0.37
SMPD4-203ENST00000412570 SIRT1Q96EB6 747 aa12.74□□□□□ -0.37
SMPD4-203ENST00000412570 DIP2AQ14689 1571 aa12.73□□□□□ -0.37
SMPD4-203ENST00000412570 USP6P35125 1406 aa12.73□□□□□ -0.37
SMPD4-203ENST00000412570 GOLGA2Q08379 1002 aa12.73□□□□□ -0.37
SMPD4-203ENST00000412570 GCP02774 474 aa12.73□□□□□ -0.37
SMPD4-203ENST00000412570 BRINP3Q76B58 766 aa12.72□□□□□ -0.37
SMPD4-203ENST00000412570 SETD1AO15047 1707 aaKnown RBP12.72□□□□□ -0.37
SMPD4-203ENST00000412570 EDC4Q6P2E9 1401 aaKnown RBP12.72□□□□□ -0.37
SMPD4-203ENST00000412570 TECPR2O15040 1411 aa12.72□□□□□ -0.37
SMPD4-203ENST00000412570 UBAP1LF5GYI3 381 aa12.71□□□□□ -0.37
SMPD4-203ENST00000412570 BCAR3O75815 825 aa12.71□□□□□ -0.37
SMPD4-203ENST00000412570 WWC1Q8IX03 1113 aa12.71□□□□□ -0.38
SMPD4-203ENST00000412570 RCAN3Q9UKA8 241 aa12.71□□□□□ -0.38
SMPD4-203ENST00000412570 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.38
SMPD4-203ENST00000412570 MYT1Q01538 1121 aa12.7□□□□□ -0.38
SMPD4-203ENST00000412570 CCDC9Q9Y3X0 531 aaKnown RBP12.7□□□□□ -0.38
SMPD4-203ENST00000412570 KRT24Q2M2I5 525 aa12.7□□□□□ -0.38
SMPD4-203ENST00000412570 ADGRL3Q9HAR2 1447 aa12.7□□□□□ -0.38
SMPD4-203ENST00000412570 EYA1Q99502 592 aa12.7□□□□□ -0.38
SMPD4-203ENST00000412570 CPSF1Q10570 1443 aaKnown RBP12.7□□□□□ -0.38
SMPD4-203ENST00000412570 TMPOP42166 694 aaKnown RBP12.69□□□□□ -0.38
SMPD4-203ENST00000412570 PUS7Q96PZ0 661 aaKnown RBP12.69□□□□□ -0.38
SMPD4-203ENST00000412570 PRDM11Q9NQV5 511 aa12.69□□□□□ -0.38
SMPD4-203ENST00000412570 DLC1Q96QB1 1528 aa12.69□□□□□ -0.38
SMPD4-203ENST00000412570 PTCH1Q13635 1447 aa12.69□□□□□ -0.38
SMPD4-203ENST00000412570 C20orf194Q5TEA3 1177 aa12.69□□□□□ -0.38
SMPD4-203ENST00000412570 IL13P35225 146 aa12.68□□□□□ -0.38
SMPD4-203ENST00000412570 NINLQ9Y2I6 1382 aa12.68□□□□□ -0.38
SMPD4-203ENST00000412570 HOXC9P31274 260 aa12.68□□□□□ -0.38
SMPD4-203ENST00000412570 SKAP1Q86WV1 359 aa12.67□□□□□ -0.38
SMPD4-203ENST00000412570 TNNQ9UQP3 1299 aa12.67□□□□□ -0.38
SMPD4-203ENST00000412570 NBPF6Q5VWK0 638 aa12.67□□□□□ -0.38
SMPD4-203ENST00000412570 NBPF4Q96M43 638 aa12.67□□□□□ -0.38
SMPD4-203ENST00000412570 PIK3R4Q99570 1358 aa12.66□□□□□ -0.38
SMPD4-203ENST00000412570 KAT6BQ8WYB5 2073 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms