RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 GLI3P10071 1580 aa24.88■■□□□ 1.57
HSPG2-204ENST00000412328 RGS12O14924 1447 aa24.87■■□□□ 1.57
HSPG2-204ENST00000412328 CCDC61Q9Y6R9 512 aa24.87■■□□□ 1.57
HSPG2-204ENST00000412328 USP54Q70EL1 1684 aa24.87■■□□□ 1.57
HSPG2-204ENST00000412328 ACEP12821 1306 aa24.86■■□□□ 1.57
HSPG2-204ENST00000412328 CABP2Q9NPB3 220 aa24.85■■□□□ 1.57
HSPG2-204ENST00000412328 SSH2Q76I76 1423 aa24.84■■□□□ 1.57
HSPG2-204ENST00000412328 NGDNQ8NEJ9 315 aaKnown RBP24.83■■□□□ 1.57
HSPG2-204ENST00000412328 CABLES1Q8TDN4 633 aa24.83■■□□□ 1.57
HSPG2-204ENST00000412328 CARD11Q9BXL7 1154 aa24.83■■□□□ 1.57
HSPG2-204ENST00000412328 USP6P35125 1406 aa24.83■■□□□ 1.57
HSPG2-204ENST00000412328 LMO7Q8WWI1 1683 aa24.82■■□□□ 1.56
HSPG2-204ENST00000412328 SRPK2P78362 688 aaKnown RBP24.82■■□□□ 1.56
HSPG2-204ENST00000412328 EVC2Q86UK5 1308 aa24.82■■□□□ 1.56
HSPG2-204ENST00000412328 BRWD3Q6RI45 1802 aa24.82■■□□□ 1.56
HSPG2-204ENST00000412328 NGLY1Q96IV0 654 aa24.81■■□□□ 1.56
HSPG2-204ENST00000412328 CD163L1Q9NR16 1453 aa24.81■■□□□ 1.56
HSPG2-204ENST00000412328 SLIT3O75094 1523 aa24.8■■□□□ 1.56
HSPG2-204ENST00000412328 USP21Q9UK80 565 aa24.78■■□□□ 1.56
HSPG2-204ENST00000412328 CPSF1Q10570 1443 aaKnown RBP24.78■■□□□ 1.56
HSPG2-204ENST00000412328 MYOM1P52179 1685 aa24.77■■□□□ 1.56
HSPG2-204ENST00000412328 BRD4O60885 1362 aaPredicted RBP24.77■■□□□ 1.56
HSPG2-204ENST00000412328 ATAD2Q6PL18 1390 aa24.77■■□□□ 1.56
HSPG2-204ENST00000412328 RXRBP28702 533 aa24.76■■□□□ 1.55
HSPG2-204ENST00000412328 QTRT2Q9H974 415 aaKnown RBP24.75■■□□□ 1.55
HSPG2-204ENST00000412328 USP19O94966 1318 aa24.75■■□□□ 1.55
HSPG2-204ENST00000412328 RBM6P78332 1123 aaKnown RBP24.74■■□□□ 1.55
HSPG2-204ENST00000412328 LMOD2Q6P5Q4 547 aa24.74■■□□□ 1.55
HSPG2-204ENST00000412328 TESK2Q96S53 571 aa24.74■■□□□ 1.55
HSPG2-204ENST00000412328 TIMELESSQ9UNS1 1208 aa24.74■■□□□ 1.55
HSPG2-204ENST00000412328 COL18A1P39060 1754 aa24.74■■□□□ 1.55
HSPG2-204ENST00000412328 CABP1Q9NZU7 370 aa24.73■■□□□ 1.55
HSPG2-204ENST00000412328 TRPC5Q9UL62 973 aaPredicted RBP24.73■■□□□ 1.55
HSPG2-204ENST00000412328 USP47Q96K76 1375 aa24.71■■□□□ 1.55
HSPG2-204ENST00000412328 EP400Q96L91 3159 aa24.71■■□□□ 1.55
HSPG2-204ENST00000412328 THSD7AQ9UPZ6 1657 aa24.7■■□□□ 1.54
HSPG2-204ENST00000412328 PAK3O75914 559 aaPredicted RBP24.7■■□□□ 1.54
HSPG2-204ENST00000412328 UNC5CLQ8IV45 518 aa24.69■■□□□ 1.54
HSPG2-204ENST00000412328 RGPD5Q99666 1765 aa24.69■■□□□ 1.54
HSPG2-204ENST00000412328 WNK3Q9BYP7 1800 aa24.68■■□□□ 1.54
HSPG2-204ENST00000412328 FAM83GA6ND36 823 aa24.68■■□□□ 1.54
HSPG2-204ENST00000412328 NFAT5O94916 1531 aa24.67■■□□□ 1.54
HSPG2-204ENST00000412328 PLEKHG5O94827 1062 aa24.67■■□□□ 1.54
HSPG2-204ENST00000412328 CPDO75976 1380 aa24.67■■□□□ 1.54
HSPG2-204ENST00000412328 KIAA0232Q92628 1395 aa24.67■■□□□ 1.54
HSPG2-204ENST00000412328 ST20-MTHFSA0A0A6YYL1 179 aa24.66■■□□□ 1.54
HSPG2-204ENST00000412328 HAP1P54257 671 aaPredicted RBP24.66■■□□□ 1.54
HSPG2-204ENST00000412328 LTN1O94822 1766 aa24.66■■□□□ 1.54
HSPG2-204ENST00000412328 CAMTA1Q9Y6Y1 1673 aa24.66■■□□□ 1.54
HSPG2-204ENST00000412328 NUTM2GQ5VZR2 741 aa24.64■■□□□ 1.54
HSPG2-204ENST00000412328 GJD4Q96KN9 370 aaPredicted RBP24.63■■□□□ 1.53
HSPG2-204ENST00000412328 PUS7Q96PZ0 661 aaKnown RBP24.63■■□□□ 1.53
HSPG2-204ENST00000412328 VPS72Q15906 364 aa24.62■■□□□ 1.53
HSPG2-204ENST00000412328 ABTB2Q8N961 1025 aa24.62■■□□□ 1.53
HSPG2-204ENST00000412328 A0A1W2PP64 1363 aa24.61■■□□□ 1.53
HSPG2-204ENST00000412328 KIF20BQ96Q89 1820 aa24.61■■□□□ 1.53
HSPG2-204ENST00000412328 KTN1Q86UP2 1357 aaKnown RBP24.6■■□□□ 1.53
HSPG2-204ENST00000412328 TTC21BQ7Z4L5 1316 aa24.6■■□□□ 1.53
HSPG2-204ENST00000412328 ABCC6O95255 1503 aa24.59■■□□□ 1.53
HSPG2-204ENST00000412328 NINLQ9Y2I6 1382 aa24.58■■□□□ 1.53
HSPG2-204ENST00000412328 CCER1Q8TC90 406 aaPredicted RBP24.58■■□□□ 1.53
HSPG2-204ENST00000412328 BTG4Q9NY30 223 aa24.58■■□□□ 1.53
HSPG2-204ENST00000412328 EDC4Q6P2E9 1401 aaKnown RBP24.58■■□□□ 1.53
HSPG2-204ENST00000412328 TTC21AQ8NDW8 1320 aa24.58■■□□□ 1.52
HSPG2-204ENST00000412328 ZNF692Q9BU19 519 aaPredicted RBP24.57■■□□□ 1.52
HSPG2-204ENST00000412328 PRDM11Q9NQV5 511 aa24.57■■□□□ 1.52
HSPG2-204ENST00000412328 COL5A2P05997 1499 aaPredicted RBP24.57■■□□□ 1.52
HSPG2-204ENST00000412328 USP31Q70CQ4 1352 aa24.55■■□□□ 1.52
HSPG2-204ENST00000412328 PARP4Q9UKK3 1724 aaKnown RBP24.55■■□□□ 1.52
HSPG2-204ENST00000412328 OVOS2A0A0J9YW53 1432 aa24.55■■□□□ 1.52
HSPG2-204ENST00000412328 OVOS2Q6IE36 1432 aa24.55■■□□□ 1.52
HSPG2-204ENST00000412328 NLRP13Q86W25 1043 aa24.55■■□□□ 1.52
HSPG2-204ENST00000412328 GCP02774 474 aa24.54■■□□□ 1.52
HSPG2-204ENST00000412328 UPF1Q92900 1129 aaKnown RBP eCLIP24.54■■□□□ 1.52
HSPG2-204ENST00000412328 SLC12A5Q9H2X9 1139 aa24.54■■□□□ 1.52
HSPG2-204ENST00000412328 ZC3H6P61129 1189 aaKnown RBP24.53■■□□□ 1.52
HSPG2-204ENST00000412328 CHRNA2Q15822 529 aa24.53■■□□□ 1.52
HSPG2-204ENST00000412328 ONECUT3O60422 494 aaPredicted RBP24.52■■□□□ 1.52
HSPG2-204ENST00000412328 SPATA31A5Q5VU36 1347 aa24.52■■□□□ 1.52
HSPG2-204ENST00000412328 SPATA31A7Q8IWB4 1347 aa24.52■■□□□ 1.52
HSPG2-204ENST00000412328 NLRP6P59044 892 aa24.5■■□□□ 1.51
HSPG2-204ENST00000412328 ANKRD36BQ8N2N9 1353 aa24.5■■□□□ 1.51
HSPG2-204ENST00000412328 LRRC37A3O60309 1634 aa24.5■■□□□ 1.51
HSPG2-204ENST00000412328 TNS1Q9HBL0 1735 aaKnown RBP24.49■■□□□ 1.51
HSPG2-204ENST00000412328 AATKQ6ZMQ8 1374 aa24.49■■□□□ 1.51
HSPG2-204ENST00000412328 SLC24A1O60721 1099 aa24.47■■□□□ 1.51
HSPG2-204ENST00000412328 TMC1Q8TDI8 760 aa24.47■■□□□ 1.51
HSPG2-204ENST00000412328 ANKRD26Q9UPS8 1709 aa24.47■■□□□ 1.51
HSPG2-204ENST00000412328 SPATA31A1Q5TZJ5 1347 aa24.46■■□□□ 1.51
HSPG2-204ENST00000412328 ZRANB1Q9UGI0 708 aa24.46■■□□□ 1.51
HSPG2-204ENST00000412328 RGPD1P0DJD0 1748 aa24.45■■□□□ 1.5
HSPG2-204ENST00000412328 TMF1P82094 1093 aa24.45■■□□□ 1.5
HSPG2-204ENST00000412328 NME9Q86XW9 330 aa24.45■■□□□ 1.5
HSPG2-204ENST00000412328 FAM208AQ9UK61 1670 aaKnown RBP24.45■■□□□ 1.5
HSPG2-204ENST00000412328 PEAK1Q9H792 1746 aa24.44■■□□□ 1.5
HSPG2-204ENST00000412328 HDGFL2Q7Z4V5 671 aaPredicted RBP24.43■■□□□ 1.5
HSPG2-204ENST00000412328 SEPT12Q8IYM1 358 aa24.43■■□□□ 1.5
HSPG2-204ENST00000412328 TERF2IPQ9NYB0 399 aa24.43■■□□□ 1.5
HSPG2-204ENST00000412328 ARHGEF25Q86VW2 580 aa24.42■■□□□ 1.5
HSPG2-204ENST00000412328 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms