RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 LRRCC1Q9C099 1032 aa8.76□□□□□ -1.01
PTPN3-203ENST00000412145 TBC1D2BQ9UPU7 963 aa8.76□□□□□ -1.01
PTPN3-203ENST00000412145 IMMTQ16891 758 aaKnown RBP8.76□□□□□ -1.01
PTPN3-203ENST00000412145 HOOK3Q86VS8 718 aa8.76□□□□□ -1.01
PTPN3-203ENST00000412145 CIZ1Q9ULV3 898 aaPredicted RBP8.76□□□□□ -1.01
PTPN3-203ENST00000412145 NOL8Q76FK4 1167 aaKnown RBP8.75□□□□□ -1.01
PTPN3-203ENST00000412145 RBM33Q96EV2 1170 aaKnown RBP8.75□□□□□ -1.01
PTPN3-203ENST00000412145 MPHOSPH9Q99550 1183 aa8.75□□□□□ -1.01
PTPN3-203ENST00000412145 VPS37CA5D8V6 355 aaPredicted RBP8.75□□□□□ -1.01
PTPN3-203ENST00000412145 PPP1R12BO60237 982 aaPredicted RBP8.75□□□□□ -1.01
PTPN3-203ENST00000412145 VGFO15240 615 aaPredicted RBP8.75□□□□□ -1.01
PTPN3-203ENST00000412145 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.75□□□□□ -1.01
PTPN3-203ENST00000412145 SMC1AQ14683 1233 aaKnown RBP8.75□□□□□ -1.01
PTPN3-203ENST00000412145 CCDC83Q8IWF9 413 aa8.75□□□□□ -1.01
PTPN3-203ENST00000412145 GCOM1H8Y6P7 765 aaPredicted RBP8.75□□□□□ -1.01
PTPN3-203ENST00000412145 MYZAPP0CAP1 466 aa8.75□□□□□ -1.01
PTPN3-203ENST00000412145 CCDC146Q8IYE0 955 aa8.75□□□□□ -1.01
PTPN3-203ENST00000412145 RAB3GAP2Q9H2M9 1393 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 GIGYF2Q6Y7W6 1299 aaKnown RBP8.74□□□□□ -1.01
PTPN3-203ENST00000412145 SMTNL1A8MU46 457 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 CALCOCO1Q9P1Z2 691 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 CCDC148Q8NFR7 591 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 WASF1Q92558 559 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 TRIM22Q8IYM9 498 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 PDILTQ8N807 584 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 PHF23Q9BUL5 403 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-203ENST00000412145 MROH2BQ7Z745 1585 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 PAF1Q8N7H5 531 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 GNL3LQ9NVN8 582 aaKnown RBP8.74□□□□□ -1.01
PTPN3-203ENST00000412145 TUBB4BP68371 445 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 VPS36Q86VN1 386 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 ZNF397Q8NF99 534 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-203ENST00000412145 C22orf23Q9BZE7 217 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 BMP2KQ9NSY1 1161 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-203ENST00000412145 PLEKHH1Q9ULM0 1364 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 GNAI3P08754 354 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 EVA1CP58658 441 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.73□□□□□ -1.01
PTPN3-203ENST00000412145 LTV1Q96GA3 475 aaPredicted RBP8.73□□□□□ -1.01
PTPN3-203ENST00000412145 WDR33Q9C0J8 1336 aaKnown RBP8.73□□□□□ -1.01
PTPN3-203ENST00000412145 CCDC57Q2TAC2 916 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 MEX3CQ5U5Q3 659 aaKnown RBP8.73□□□□□ -1.01
PTPN3-203ENST00000412145 CFAP45Q9UL16 551 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 ZSCAN12O43309 604 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 NEMFO60524 1076 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 CAVIN2O95810 425 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 NOL7Q9UMY1 257 aaKnown RBP8.73□□□□□ -1.01
PTPN3-203ENST00000412145 ZSCAN25Q6NSZ9 544 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 TAOK3Q9H2K8 898 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 GOLGA6L9A6NEM1 432 aa8.72□□□□□ -1.01
PTPN3-203ENST00000412145 TAF4BQ92750 862 aa8.72□□□□□ -1.01
PTPN3-203ENST00000412145 SRCIN1Q9C0H9 1055 aa8.72□□□□□ -1.01
PTPN3-203ENST00000412145 C6orf163Q5TEZ5 329 aa8.72□□□□□ -1.01
PTPN3-203ENST00000412145 CEP57L1Q8IYX8 460 aa8.72□□□□□ -1.01
PTPN3-203ENST00000412145 HMGB3O15347 200 aaKnown RBP8.72□□□□□ -1.01
PTPN3-203ENST00000412145 FGFR1OPO95684 399 aaKnown RBP8.72□□□□□ -1.01
PTPN3-203ENST00000412145 KIF20AO95235 890 aa8.71□□□□□ -1.01
PTPN3-203ENST00000412145 SREK1Q8WXA9 508 aaKnown RBP8.71□□□□□ -1.01
PTPN3-203ENST00000412145 CRACR2AQ9BSW2 395 aa8.71□□□□□ -1.01
PTPN3-203ENST00000412145 CEP131Q9UPN4 1083 aa8.71□□□□□ -1.01
PTPN3-203ENST00000412145 SPECC1LQ69YQ0 1117 aa8.71□□□□□ -1.02
PTPN3-203ENST00000412145 NACAP1Q9BZK3 213 aa8.71□□□□□ -1.02
PTPN3-203ENST00000412145 KRT18P05783 430 aaKnown RBP8.71□□□□□ -1.02
PTPN3-203ENST00000412145 PTPRGP23470 1445 aa8.71□□□□□ -1.02
PTPN3-203ENST00000412145 GRIPAP1Q4V328 841 aa8.71□□□□□ -1.02
PTPN3-203ENST00000412145 GCC1Q96CN9 775 aa8.71□□□□□ -1.02
PTPN3-203ENST00000412145 PHAXQ9H814 394 aaKnown RBP8.71□□□□□ -1.02
PTPN3-203ENST00000412145 SMG6Q86US8 1419 aaKnown RBP8.71□□□□□ -1.02
PTPN3-203ENST00000412145 FYB1O15117 783 aa8.71□□□□□ -1.02
PTPN3-203ENST00000412145 TUBB4AP04350 444 aa8.71□□□□□ -1.02
PTPN3-203ENST00000412145 BBXQ8WY36 941 aaPredicted RBP8.71□□□□□ -1.02
PTPN3-203ENST00000412145 MSH5O43196 834 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 KRT32Q14532 448 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 PYM1Q9BRP8 204 aaKnown RBP8.7□□□□□ -1.02
PTPN3-203ENST00000412145 ZSCAN31Q96LW9 406 aaPredicted RBP8.7□□□□□ -1.02
PTPN3-203ENST00000412145 EPB41L2O43491 1005 aaKnown RBP8.7□□□□□ -1.02
PTPN3-203ENST00000412145 TTLL5Q6EMB2 1281 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 RUNDC1Q96C34 613 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 FOXD4L1Q9NU39 408 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 ABCC8Q09428 1581 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 FERMT1Q9BQL6 677 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 CEP63Q96MT8 703 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 MCM5P33992 734 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 KRT85P78386 507 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 STK38Q15208 465 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 KANK4Q5T7N3 995 aaPredicted RBP8.7□□□□□ -1.02
PTPN3-203ENST00000412145 PLCD4Q9BRC7 762 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 PDCL3Q9H2J4 239 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 NAA15Q9BXJ9 866 aaKnown RBP8.69□□□□□ -1.02
PTPN3-203ENST00000412145 TRAK1Q9UPV9 953 aa8.69□□□□□ -1.02
PTPN3-203ENST00000412145 EHBP1Q8NDI1 1231 aa8.69□□□□□ -1.02
PTPN3-203ENST00000412145 ZNF428Q96B54 188 aa8.69□□□□□ -1.02
PTPN3-203ENST00000412145 ANKRD62A6NC57 917 aa8.69□□□□□ -1.02
PTPN3-203ENST00000412145 SERPINC1P01008 464 aa8.69□□□□□ -1.02
PTPN3-203ENST00000412145 FILIP1Q7Z7B0 1213 aa8.69□□□□□ -1.02
PTPN3-203ENST00000412145 MAP2K1Q02750 393 aaPredicted RBP8.69□□□□□ -1.02
PTPN3-203ENST00000412145 BRD4O60885 1362 aaPredicted RBP8.69□□□□□ -1.02
PTPN3-203ENST00000412145 CLUAP1Q96AJ1 413 aa8.69□□□□□ -1.02
PTPN3-203ENST00000412145 TMEM132AQ24JP5 1023 aa8.69□□□□□ -1.02
PTPN3-203ENST00000412145 ZNF287Q9HBT7 754 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms