RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 NGDNQ8NEJ9 315 aaKnown RBP13.34□□□□□ -0.27
MRPL48-204ENST00000411840 EIF3AQ14152 1382 aaKnown RBP13.33□□□□□ -0.27
MRPL48-204ENST00000411840 A0A0G2JS52 829 aa13.33□□□□□ -0.28
MRPL48-204ENST00000411840 PAK3O75914 559 aaPredicted RBP13.33□□□□□ -0.28
MRPL48-204ENST00000411840 MYT1Q01538 1121 aa13.33□□□□□ -0.28
MRPL48-204ENST00000411840 ADGRB2O60241 1585 aa13.32□□□□□ -0.28
MRPL48-204ENST00000411840 RGPD8O14715 1765 aaPredicted RBP13.32□□□□□ -0.28
MRPL48-204ENST00000411840 HRCP23327 699 aa13.32□□□□□ -0.28
MRPL48-204ENST00000411840 NUDT16Q96DE0 195 aaKnown RBP13.31□□□□□ -0.28
MRPL48-204ENST00000411840 TULP4Q9NRJ4 1543 aa13.3□□□□□ -0.28
MRPL48-204ENST00000411840 PLCH1Q4KWH8 1693 aa13.3□□□□□ -0.28
MRPL48-204ENST00000411840 NWD2Q9ULI1 1742 aa13.3□□□□□ -0.28
MRPL48-204ENST00000411840 ZBTB22O15209 634 aa13.29□□□□□ -0.28
MRPL48-204ENST00000411840 SPATA31A5Q5VU36 1347 aa13.29□□□□□ -0.28
MRPL48-204ENST00000411840 SPATA31A7Q8IWB4 1347 aa13.29□□□□□ -0.28
MRPL48-204ENST00000411840 BAG6P46379 1132 aa13.28□□□□□ -0.28
MRPL48-204ENST00000411840 FAM182BQ5T319 152 aa13.28□□□□□ -0.28
MRPL48-204ENST00000411840 CDK19Q9BWU1 502 aa13.28□□□□□ -0.28
MRPL48-204ENST00000411840 PRDM11Q9NQV5 511 aa13.28□□□□□ -0.28
MRPL48-204ENST00000411840 ABCA3Q99758 1704 aa13.27□□□□□ -0.28
MRPL48-204ENST00000411840 TRPM3Q9HCF6 1732 aaPredicted RBP13.27□□□□□ -0.28
MRPL48-204ENST00000411840 CHRNA2Q15822 529 aa13.26□□□□□ -0.29
MRPL48-204ENST00000411840 NUTM2GQ5VZR2 741 aa13.26□□□□□ -0.29
MRPL48-204ENST00000411840 BRWD3Q6RI45 1802 aa13.26□□□□□ -0.29
MRPL48-204ENST00000411840 ALS2Q96Q42 1657 aa13.25□□□□□ -0.29
MRPL48-204ENST00000411840 KIAA0232Q92628 1395 aa13.25□□□□□ -0.29
MRPL48-204ENST00000411840 PSDA5PKW4 1024 aaPredicted RBP13.25□□□□□ -0.29
MRPL48-204ENST00000411840 ZC3H6P61129 1189 aaKnown RBP13.25□□□□□ -0.29
MRPL48-204ENST00000411840 EN1Q05925 392 aaPredicted RBP13.25□□□□□ -0.29
MRPL48-204ENST00000411840 NBPF8Q3BBV2 869 aa13.25□□□□□ -0.29
MRPL48-204ENST00000411840 CCDC61Q9Y6R9 512 aa13.25□□□□□ -0.29
MRPL48-204ENST00000411840 COL14A1Q05707 1796 aaKnown RBP13.25□□□□□ -0.29
MRPL48-204ENST00000411840 ATP7BP35670 1465 aa13.24□□□□□ -0.29
MRPL48-204ENST00000411840 ACEP12821 1306 aa13.24□□□□□ -0.29
MRPL48-204ENST00000411840 SPATA31A1Q5TZJ5 1347 aa13.24□□□□□ -0.29
MRPL48-204ENST00000411840 PLEKHG3A1L390 1219 aa13.24□□□□□ -0.29
MRPL48-204ENST00000411840 POTEDQ86YR6 584 aa13.24□□□□□ -0.29
MRPL48-204ENST00000411840 NRAPQ86VF7 1730 aa13.23□□□□□ -0.29
MRPL48-204ENST00000411840 STRN4Q9NRL3 753 aa13.23□□□□□ -0.29
MRPL48-204ENST00000411840 POLR3AO14802 1390 aaPredicted RBP13.22□□□□□ -0.29
MRPL48-204ENST00000411840 EVA1CP58658 441 aa13.22□□□□□ -0.29
MRPL48-204ENST00000411840 NBPF1Q3BBV0 1214 aa13.22□□□□□ -0.29
MRPL48-204ENST00000411840 ABTB2Q8N961 1025 aa13.21□□□□□ -0.29
MRPL48-204ENST00000411840 USP35Q9P2H5 1018 aa13.21□□□□□ -0.29
MRPL48-204ENST00000411840 FAM196AQ6ZSG2 479 aa13.2□□□□□ -0.3
MRPL48-204ENST00000411840 TRIM37O94972 964 aa13.19□□□□□ -0.3
MRPL48-204ENST00000411840 SRPK2P78362 688 aaKnown RBP13.19□□□□□ -0.3
MRPL48-204ENST00000411840 R3HDM1Q15032 1099 aaKnown RBP13.19□□□□□ -0.3
MRPL48-204ENST00000411840 EZH2Q15910 746 aaKnown RBP13.19□□□□□ -0.3
MRPL48-204ENST00000411840 PDE3BQ13370 1112 aa13.18□□□□□ -0.3
MRPL48-204ENST00000411840 LARP1Q6PKG0 1096 aaKnown RBP13.18□□□□□ -0.3
MRPL48-204ENST00000411840 BARGINQ6ZT62 677 aa13.18□□□□□ -0.3
MRPL48-204ENST00000411840 CAMKK2Q96RR4 588 aa13.18□□□□□ -0.3
MRPL48-204ENST00000411840 CABP2Q9NPB3 220 aa13.18□□□□□ -0.3
MRPL48-204ENST00000411840 ARHGEF28Q8N1W1 1705 aaKnown RBP13.18□□□□□ -0.3
MRPL48-204ENST00000411840 CRYBG1Q9Y4K1 1723 aa13.18□□□□□ -0.3
MRPL48-204ENST00000411840 DISP2A7MBM2 1401 aa13.17□□□□□ -0.3
MRPL48-204ENST00000411840 APBA3O96018 575 aa13.17□□□□□ -0.3
MRPL48-204ENST00000411840 GCP02774 474 aa13.17□□□□□ -0.3
MRPL48-204ENST00000411840 NLRP13Q86W25 1043 aa13.17□□□□□ -0.3
MRPL48-204ENST00000411840 THSD7AQ9UPZ6 1657 aa13.17□□□□□ -0.3
MRPL48-204ENST00000411840 CENPJQ9HC77 1338 aaPredicted RBP13.16□□□□□ -0.3
MRPL48-204ENST00000411840 SSH2Q76I76 1423 aa13.16□□□□□ -0.3
MRPL48-204ENST00000411840 CPDO75976 1380 aa13.16□□□□□ -0.3
MRPL48-204ENST00000411840 USP19O94966 1318 aa13.15□□□□□ -0.3
MRPL48-204ENST00000411840 PPIP5K1Q6PFW1 1433 aa13.15□□□□□ -0.3
MRPL48-204ENST00000411840 TCP11L2Q8N4U5 519 aa13.15□□□□□ -0.3
MRPL48-204ENST00000411840 CABP1Q9NZU7 370 aa13.15□□□□□ -0.3
MRPL48-204ENST00000411840 ITSN1Q15811 1721 aa13.15□□□□□ -0.3
MRPL48-204ENST00000411840 CAMTA1Q9Y6Y1 1673 aa13.15□□□□□ -0.31
MRPL48-204ENST00000411840 PHRF1Q9P1Y6 1649 aaKnown RBP13.14□□□□□ -0.31
MRPL48-204ENST00000411840 FOXD4L1Q9NU39 408 aa13.14□□□□□ -0.31
MRPL48-204ENST00000411840 THRAP3Q9Y2W1 955 aaKnown RBP13.14□□□□□ -0.31
MRPL48-204ENST00000411840 LRP5O75197 1615 aa13.13□□□□□ -0.31
MRPL48-204ENST00000411840 RGPD1P0DJD0 1748 aa13.13□□□□□ -0.31
MRPL48-204ENST00000411840 TOPAZ1Q8N9V7 1692 aa13.12□□□□□ -0.31
MRPL48-204ENST00000411840 BRD4O60885 1362 aaPredicted RBP13.12□□□□□ -0.31
MRPL48-204ENST00000411840 PARD3Q8TEW0 1356 aa13.12□□□□□ -0.31
MRPL48-204ENST00000411840 ZBTB7CA1YPR0 619 aa13.12□□□□□ -0.31
MRPL48-204ENST00000411840 NLRP6P59044 892 aa13.12□□□□□ -0.31
MRPL48-204ENST00000411840 L3MBTL2Q969R5 705 aa13.12□□□□□ -0.31
MRPL48-204ENST00000411840 KIAA1210Q9ULL0 1709 aa13.12□□□□□ -0.31
MRPL48-204ENST00000411840 NRKQ7Z2Y5 1582 aa13.11□□□□□ -0.31
MRPL48-204ENST00000411840 NBPF14Q5TI25 921 aa13.1□□□□□ -0.31
MRPL48-204ENST00000411840 TNS1Q9HBL0 1735 aaKnown RBP13.09□□□□□ -0.31
MRPL48-204ENST00000411840 COL5A2P05997 1499 aaPredicted RBP13.09□□□□□ -0.31
MRPL48-204ENST00000411840 EVC2Q86UK5 1308 aa13.09□□□□□ -0.31
MRPL48-204ENST00000411840 LMO7Q8WWI1 1683 aa13.08□□□□□ -0.31
MRPL48-204ENST00000411840 AATKQ6ZMQ8 1374 aa13.08□□□□□ -0.31
MRPL48-204ENST00000411840 USP6P35125 1406 aa13.08□□□□□ -0.32
MRPL48-204ENST00000411840 CRB1P82279 1406 aa13.08□□□□□ -0.32
MRPL48-204ENST00000411840 C11orf95C9JLR9 678 aaPredicted RBP13.08□□□□□ -0.32
MRPL48-204ENST00000411840 TOM1L2Q6ZVM7 507 aa13.07□□□□□ -0.32
MRPL48-204ENST00000411840 SIN3AQ96ST3 1273 aa13.07□□□□□ -0.32
MRPL48-204ENST00000411840 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
MRPL48-204ENST00000411840 AXIN2Q9Y2T1 843 aa13.07□□□□□ -0.32
MRPL48-204ENST00000411840 NEUROD1Q13562 356 aa13.06□□□□□ -0.32
MRPL48-204ENST00000411840 DDB1Q16531 1140 aa13.06□□□□□ -0.32
MRPL48-204ENST00000411840 TTC21BQ7Z4L5 1316 aa13.05□□□□□ -0.32
MRPL48-204ENST00000411840 SLIT3O75094 1523 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms