RNA–Protein interactions for RNA: ENST00000410773.1

RN7SKP39-201, Transcript of RNA, 7SK small nuclear pseudogene 39, humanhuman

BASIC

Gene RN7SKP39, Length 322 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP39-201ENST00000410773 NRXN1Q9ULB1 1477 aa12.01□□□□□ -0.49
RN7SKP39-201ENST00000410773 TRPM3Q9HCF6 1732 aaPredicted RBP12□□□□□ -0.49
RN7SKP39-201ENST00000410773 CRYBG1Q9Y4K1 1723 aa12□□□□□ -0.49
RN7SKP39-201ENST00000410773 PSME1Q06323 249 aa12□□□□□ -0.49
RN7SKP39-201ENST00000410773 ALS2Q96Q42 1657 aa12□□□□□ -0.49
RN7SKP39-201ENST00000410773 PHF8Q9UPP1 1060 aa11.99□□□□□ -0.49
RN7SKP39-201ENST00000410773 STK26Q9P289 416 aa11.98□□□□□ -0.49
RN7SKP39-201ENST00000410773 RGPD3A6NKT7 1758 aaPredicted RBP11.97□□□□□ -0.49
RN7SKP39-201ENST00000410773 RGPD4Q7Z3J3 1758 aa11.97□□□□□ -0.49
RN7SKP39-201ENST00000410773 SPATA31A1Q5TZJ5 1347 aa11.96□□□□□ -0.49
RN7SKP39-201ENST00000410773 RPGRIP1LQ68CZ1 1315 aa11.96□□□□□ -0.49
RN7SKP39-201ENST00000410773 ABCC11Q96J66 1382 aa11.94□□□□□ -0.5
RN7SKP39-201ENST00000410773 LOC105371045A0A1W2PR82 267 aa11.93□□□□□ -0.5
RN7SKP39-201ENST00000410773 GIGYF1O75420 1035 aaPredicted RBP11.92□□□□□ -0.5
RN7SKP39-201ENST00000410773 PTGER2P43116 358 aa11.92□□□□□ -0.5
RN7SKP39-201ENST00000410773 PDGFDQ9GZP0 370 aaPredicted RBP11.92□□□□□ -0.5
RN7SKP39-201ENST00000410773 ANO8Q9HCE9 1232 aaPredicted RBP11.92□□□□□ -0.5
RN7SKP39-201ENST00000410773 PRDM11Q9NQV5 511 aa11.92□□□□□ -0.5
RN7SKP39-201ENST00000410773 ADGRF5Q8IZF2 1346 aa11.91□□□□□ -0.5
RN7SKP39-201ENST00000410773 ZBTB7AO95365 584 aa11.91□□□□□ -0.5
RN7SKP39-201ENST00000410773 TMEM132EQ6IEE7 984 aa11.91□□□□□ -0.5
RN7SKP39-201ENST00000410773 FHDC1Q9C0D6 1143 aaPredicted RBP11.91□□□□□ -0.5
RN7SKP39-201ENST00000410773 YTHDC2Q9H6S0 1430 aaKnown RBP11.91□□□□□ -0.5
RN7SKP39-201ENST00000410773 DLC1Q96QB1 1528 aa11.91□□□□□ -0.5
RN7SKP39-201ENST00000410773 SBF2Q86WG5 1849 aa11.9□□□□□ -0.5
RN7SKP39-201ENST00000410773 PHRF1Q9P1Y6 1649 aaKnown RBP11.9□□□□□ -0.5
RN7SKP39-201ENST00000410773 PDE3BQ13370 1112 aa11.9□□□□□ -0.5
RN7SKP39-201ENST00000410773 PMFBP1Q8TBY8 1022 aa11.9□□□□□ -0.5
RN7SKP39-201ENST00000410773 SYT17Q9BSW7 474 aa11.9□□□□□ -0.5
RN7SKP39-201ENST00000410773 PEAK1Q9H792 1746 aa11.89□□□□□ -0.51
RN7SKP39-201ENST00000410773 PARP4Q9UKK3 1724 aaKnown RBP11.89□□□□□ -0.51
RN7SKP39-201ENST00000410773 STRN4Q9NRL3 753 aa11.89□□□□□ -0.51
RN7SKP39-201ENST00000410773 USP35Q9P2H5 1018 aa11.89□□□□□ -0.51
RN7SKP39-201ENST00000410773 KIAA0232Q92628 1395 aa11.89□□□□□ -0.51
RN7SKP39-201ENST00000410773 SHANK3Q9BYB0 1731 aa11.89□□□□□ -0.51
RN7SKP39-201ENST00000410773 ANKARQ7Z5J8 1434 aa11.88□□□□□ -0.51
RN7SKP39-201ENST00000410773 BARGINQ6ZT62 677 aa11.88□□□□□ -0.51
RN7SKP39-201ENST00000410773 PIK3C2GO75747 1445 aa11.87□□□□□ -0.51
RN7SKP39-201ENST00000410773 ITGAEP38570 1179 aa11.87□□□□□ -0.51
RN7SKP39-201ENST00000410773 CHRNA2Q15822 529 aa11.87□□□□□ -0.51
RN7SKP39-201ENST00000410773 ATF5Q9Y2D1 282 aaPredicted RBP11.87□□□□□ -0.51
RN7SKP39-201ENST00000410773 SSH2Q76I76 1423 aa11.86□□□□□ -0.51
RN7SKP39-201ENST00000410773 ACIN1Q9UKV3 1341 aaKnown RBP11.86□□□□□ -0.51
RN7SKP39-201ENST00000410773 GPRASP1Q5JY77 1395 aa11.85□□□□□ -0.51
RN7SKP39-201ENST00000410773 SIRT1Q96EB6 747 aa11.85□□□□□ -0.51
RN7SKP39-201ENST00000410773 PLSCR1O15162 318 aa11.84□□□□□ -0.51
RN7SKP39-201ENST00000410773 OVOS2A0A0G2JMS6 1433 aa11.84□□□□□ -0.51
RN7SKP39-201ENST00000410773 OVOS2A0A0J9YW53 1432 aa11.84□□□□□ -0.51
RN7SKP39-201ENST00000410773 OVOS2Q6IE36 1432 aa11.84□□□□□ -0.51
RN7SKP39-201ENST00000410773 LMO7Q8WWI1 1683 aa11.84□□□□□ -0.51
RN7SKP39-201ENST00000410773 SAFB2Q14151 953 aaKnown RBP eCLIP11.83□□□□□ -0.52
RN7SKP39-201ENST00000410773 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
RN7SKP39-201ENST00000410773 BCL11BQ9C0K0 894 aaPredicted RBP11.83□□□□□ -0.52
RN7SKP39-201ENST00000410773 LRRC37A3O60309 1634 aa11.82□□□□□ -0.52
RN7SKP39-201ENST00000410773 MAP3K5Q99683 1374 aa11.82□□□□□ -0.52
RN7SKP39-201ENST00000410773 ANKRD30BQ9BXX2 1392 aa11.82□□□□□ -0.52
RN7SKP39-201ENST00000410773 LARP1Q6PKG0 1096 aaKnown RBP11.82□□□□□ -0.52
RN7SKP39-201ENST00000410773 TCP11L2Q8N4U5 519 aa11.82□□□□□ -0.52
RN7SKP39-201ENST00000410773 SPATA31E1Q6ZUB1 1445 aa11.82□□□□□ -0.52
RN7SKP39-201ENST00000410773 PAK3O75914 559 aaPredicted RBP11.81□□□□□ -0.52
RN7SKP39-201ENST00000410773 PTF1AQ7RTS3 328 aa11.81□□□□□ -0.52
RN7SKP39-201ENST00000410773 PROM2Q8N271 834 aa11.81□□□□□ -0.52
RN7SKP39-201ENST00000410773 PRAM1Q96QH2 718 aa11.81□□□□□ -0.52
RN7SKP39-201ENST00000410773 MTFR1LQ9H019 292 aa11.81□□□□□ -0.52
RN7SKP39-201ENST00000410773 PRR36Q9H6K5 1346 aa11.81□□□□□ -0.52
RN7SKP39-201ENST00000410773 TULP4Q9NRJ4 1543 aa11.81□□□□□ -0.52
RN7SKP39-201ENST00000410773 DHX57Q6P158 1386 aaKnown RBP11.8□□□□□ -0.52
RN7SKP39-201ENST00000410773 C11orf95C9JLR9 678 aaPredicted RBP11.8□□□□□ -0.52
RN7SKP39-201ENST00000410773 EVA1CP58658 441 aa11.8□□□□□ -0.52
RN7SKP39-201ENST00000410773 ZC3H6P61129 1189 aaKnown RBP11.8□□□□□ -0.52
RN7SKP39-201ENST00000410773 ATP7BP35670 1465 aa11.8□□□□□ -0.52
RN7SKP39-201ENST00000410773 GPR162Q16538 588 aa11.79□□□□□ -0.52
RN7SKP39-201ENST00000410773 RGL3Q3MIN7 710 aa11.79□□□□□ -0.52
RN7SKP39-201ENST00000410773 ARXQ96QS3 562 aa11.79□□□□□ -0.52
RN7SKP39-201ENST00000410773 ITSN1Q15811 1721 aa11.79□□□□□ -0.52
RN7SKP39-201ENST00000410773 AKAP12Q02952 1782 aa11.79□□□□□ -0.52
RN7SKP39-201ENST00000410773 WNK3Q9BYP7 1800 aa11.79□□□□□ -0.52
RN7SKP39-201ENST00000410773 SLC15A2Q16348 729 aa11.78□□□□□ -0.52
RN7SKP39-201ENST00000410773 STK32BQ9NY57 414 aa11.78□□□□□ -0.52
RN7SKP39-201ENST00000410773 THRAP3Q9Y2W1 955 aaKnown RBP11.78□□□□□ -0.52
RN7SKP39-201ENST00000410773 PCNTO95613 3336 aa11.77□□□□□ -0.52
RN7SKP39-201ENST00000410773 NGDNQ8NEJ9 315 aaKnown RBP11.77□□□□□ -0.53
RN7SKP39-201ENST00000410773 HIRIP3Q9BW71 556 aaPredicted RBP11.77□□□□□ -0.53
RN7SKP39-201ENST00000410773 EIF3AQ14152 1382 aaKnown RBP11.77□□□□□ -0.53
RN7SKP39-201ENST00000410773 COL5A2P05997 1499 aaPredicted RBP11.76□□□□□ -0.53
RN7SKP39-201ENST00000410773 SLC4A1APQ9BWU0 796 aaKnown RBP11.76□□□□□ -0.53
RN7SKP39-201ENST00000410773 C14orf93Q9H972 538 aaKnown RBP11.76□□□□□ -0.53
RN7SKP39-201ENST00000410773 PAPPAQ13219 1627 aa11.75□□□□□ -0.53
RN7SKP39-201ENST00000410773 TOPAZ1Q8N9V7 1692 aa11.75□□□□□ -0.53
RN7SKP39-201ENST00000410773 HSPA6P17066 643 aa11.75□□□□□ -0.53
RN7SKP39-201ENST00000410773 TXNRD1Q16881 649 aa11.75□□□□□ -0.53
RN7SKP39-201ENST00000410773 NUTM2GQ5VZR2 741 aa11.75□□□□□ -0.53
RN7SKP39-201ENST00000410773 POGKQ9P215 609 aa11.75□□□□□ -0.53
RN7SKP39-201ENST00000410773 CPDO75976 1380 aa11.75□□□□□ -0.53
RN7SKP39-201ENST00000410773 CRB1P82279 1406 aa11.74□□□□□ -0.53
RN7SKP39-201ENST00000410773 BCL9O00512 1426 aa11.73□□□□□ -0.53
RN7SKP39-201ENST00000410773 DDB1Q16531 1140 aa11.73□□□□□ -0.53
RN7SKP39-201ENST00000410773 COL24A1Q17RW2 1714 aa11.73□□□□□ -0.53
RN7SKP39-201ENST00000410773 CFAP70Q5T0N1 1121 aa11.73□□□□□ -0.53
RN7SKP39-201ENST00000410773 AATKQ6ZMQ8 1374 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms