RNA–Protein interactions for RNA: ENST00000409704.6

ITM2C-204, Transcript of integral membrane protein 2C, humanhuman

TSL 5 BASIC

Gene ITM2C, Length 1,106 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-204ENST00000409704 HAP1P54257 671 aaPredicted RBP25.67■■□□□ 1.7
ITM2C-204ENST00000409704 PPIP5K1Q6PFW1 1433 aa25.67■■□□□ 1.7
ITM2C-204ENST00000409704 CCDC61Q9Y6R9 512 aa25.66■■□□□ 1.7
ITM2C-204ENST00000409704 GLI3P10071 1580 aa25.65■■□□□ 1.7
ITM2C-204ENST00000409704 COL14A1Q05707 1796 aaKnown RBP25.65■■□□□ 1.7
ITM2C-204ENST00000409704 PLEKHG5O94827 1062 aa25.65■■□□□ 1.7
ITM2C-204ENST00000409704 SRPK2P78362 688 aaKnown RBP25.65■■□□□ 1.7
ITM2C-204ENST00000409704 ACEP12821 1306 aa25.63■■□□□ 1.69
ITM2C-204ENST00000409704 PLEKHG3A1L390 1219 aa25.63■■□□□ 1.69
ITM2C-204ENST00000409704 CABP2Q9NPB3 220 aa25.62■■□□□ 1.69
ITM2C-204ENST00000409704 NRKQ7Z2Y5 1582 aa25.61■■□□□ 1.69
ITM2C-204ENST00000409704 PAK3O75914 559 aaPredicted RBP25.61■■□□□ 1.69
ITM2C-204ENST00000409704 UNC5CLQ8IV45 518 aa25.6■■□□□ 1.69
ITM2C-204ENST00000409704 SBNO2Q9Y2G9 1366 aa25.59■■□□□ 1.69
ITM2C-204ENST00000409704 EVC2Q86UK5 1308 aa25.59■■□□□ 1.69
ITM2C-204ENST00000409704 AKAP12Q02952 1782 aa25.59■■□□□ 1.69
ITM2C-204ENST00000409704 USP6P35125 1406 aa25.55■■□□□ 1.68
ITM2C-204ENST00000409704 GJD4Q96KN9 370 aaPredicted RBP25.55■■□□□ 1.68
ITM2C-204ENST00000409704 CARD11Q9BXL7 1154 aa25.55■■□□□ 1.68
ITM2C-204ENST00000409704 UPF1Q92900 1129 aaKnown RBP eCLIP25.54■■□□□ 1.681e-16■■■■■ 29.1
ITM2C-204ENST00000409704 BRD4O60885 1362 aaPredicted RBP25.54■■□□□ 1.68
ITM2C-204ENST00000409704 PIK3C2AO00443 1686 aa25.53■■□□□ 1.68
ITM2C-204ENST00000409704 FAM83GA6ND36 823 aa25.52■■□□□ 1.68
ITM2C-204ENST00000409704 MON2Q7Z3U7 1717 aa25.51■■□□□ 1.68
ITM2C-204ENST00000409704 BRWD3Q6RI45 1802 aa25.51■■□□□ 1.67
ITM2C-204ENST00000409704 ATAD2Q6PL18 1390 aa25.51■■□□□ 1.67
ITM2C-204ENST00000409704 VPS72Q15906 364 aa25.5■■□□□ 1.67
ITM2C-204ENST00000409704 CABP1Q9NZU7 370 aa25.5■■□□□ 1.67
ITM2C-204ENST00000409704 USP19O94966 1318 aa25.49■■□□□ 1.67
ITM2C-204ENST00000409704 SSH2Q76I76 1423 aa25.48■■□□□ 1.67
ITM2C-204ENST00000409704 KIAA0232Q92628 1395 aa25.48■■□□□ 1.67
ITM2C-204ENST00000409704 NUTM2GQ5VZR2 741 aa25.48■■□□□ 1.67
ITM2C-204ENST00000409704 LMO7Q8WWI1 1683 aa25.48■■□□□ 1.67
ITM2C-204ENST00000409704 SLIT3O75094 1523 aa25.47■■□□□ 1.67
ITM2C-204ENST00000409704 ABTB2Q8N961 1025 aa25.46■■□□□ 1.67
ITM2C-204ENST00000409704 PRDM11Q9NQV5 511 aa25.46■■□□□ 1.67
ITM2C-204ENST00000409704 BTG4Q9NY30 223 aa25.46■■□□□ 1.67
ITM2C-204ENST00000409704 EP400Q96L91 3159 aa25.46■■□□□ 1.67
ITM2C-204ENST00000409704 CPSF1Q10570 1443 aaKnown RBP25.44■■□□□ 1.66
ITM2C-204ENST00000409704 CCDC9Q9Y3X0 531 aaKnown RBP25.42■■□□□ 1.66
ITM2C-204ENST00000409704 CPDO75976 1380 aa25.42■■□□□ 1.66
ITM2C-204ENST00000409704 THSD7AQ9UPZ6 1657 aa25.42■■□□□ 1.66
ITM2C-204ENST00000409704 CLSPNQ9HAW4 1339 aa25.41■■□□□ 1.66
ITM2C-204ENST00000409704 USP54Q70EL1 1684 aa25.41■■□□□ 1.66
ITM2C-204ENST00000409704 NLRP13Q86W25 1043 aa25.4■■□□□ 1.66
ITM2C-204ENST00000409704 PCGF6Q9BYE7 350 aa25.4■■□□□ 1.66
ITM2C-204ENST00000409704 CD163L1Q9NR16 1453 aa25.4■■□□□ 1.66
ITM2C-204ENST00000409704 ZC3H6P61129 1189 aaKnown RBP25.39■■□□□ 1.66
ITM2C-204ENST00000409704 CHRNA2Q15822 529 aa25.39■■□□□ 1.66
ITM2C-204ENST00000409704 CAMTA1Q9Y6Y1 1673 aa25.38■■□□□ 1.65
ITM2C-204ENST00000409704 KTN1Q86UP2 1357 aaKnown RBP25.36■■□□□ 1.65
ITM2C-204ENST00000409704 SEPT12Q8IYM1 358 aa25.36■■□□□ 1.65
ITM2C-204ENST00000409704 SPATA31A5Q5VU36 1347 aa25.36■■□□□ 1.65
ITM2C-204ENST00000409704 SPATA31A7Q8IWB4 1347 aa25.36■■□□□ 1.65
ITM2C-204ENST00000409704 ONECUT3O60422 494 aaPredicted RBP25.35■■□□□ 1.65
ITM2C-204ENST00000409704 ZNF692Q9BU19 519 aaPredicted RBP25.35■■□□□ 1.65
ITM2C-204ENST00000409704 TTC21BQ7Z4L5 1316 aa25.35■■□□□ 1.65
ITM2C-204ENST00000409704 GCP02774 474 aa25.34■■□□□ 1.65
ITM2C-204ENST00000409704 NLRP6P59044 892 aa25.34■■□□□ 1.65
ITM2C-204ENST00000409704 TESK2Q96S53 571 aa25.34■■□□□ 1.65
ITM2C-204ENST00000409704 TTC21AQ8NDW8 1320 aa25.34■■□□□ 1.65
ITM2C-204ENST00000409704 COL18A1P39060 1754 aa25.33■■□□□ 1.65
ITM2C-204ENST00000409704 USP47Q96K76 1375 aa25.33■■□□□ 1.65
ITM2C-204ENST00000409704 NFAT5O94916 1531 aa25.32■■□□□ 1.64
ITM2C-204ENST00000409704 ST20-MTHFSA0A0A6YYL1 179 aa25.32■■□□□ 1.64
ITM2C-204ENST00000409704 FAM98CQ17RN3 349 aaKnown RBP25.32■■□□□ 1.64
ITM2C-204ENST00000409704 COL5A2P05997 1499 aaPredicted RBP25.32■■□□□ 1.64
ITM2C-204ENST00000409704 STRN4Q9NRL3 753 aa25.3■■□□□ 1.64
ITM2C-204ENST00000409704 TIMELESSQ9UNS1 1208 aa25.3■■□□□ 1.64
ITM2C-204ENST00000409704 SPATA31A1Q5TZJ5 1347 aa25.3■■□□□ 1.64
ITM2C-204ENST00000409704 A0A0G2JS52 829 aa25.29■■□□□ 1.64
ITM2C-204ENST00000409704 MYT1Q01538 1121 aa25.29■■□□□ 1.64
ITM2C-204ENST00000409704 PUS7Q96PZ0 661 aaKnown RBP25.29■■□□□ 1.64
ITM2C-204ENST00000409704 A0A1W2PP64 1363 aa25.29■■□□□ 1.64
ITM2C-204ENST00000409704 NINLQ9Y2I6 1382 aa25.29■■□□□ 1.64
ITM2C-204ENST00000409704 EDC4Q6P2E9 1401 aaKnown RBP25.29■■□□□ 1.64
ITM2C-204ENST00000409704 TMC1Q8TDI8 760 aa25.27■■□□□ 1.64
ITM2C-204ENST00000409704 WNK3Q9BYP7 1800 aa25.27■■□□□ 1.64
ITM2C-204ENST00000409704 BLMP54132 1417 aaPredicted RBP25.27■■□□□ 1.64
ITM2C-204ENST00000409704 ABCC6O95255 1503 aa25.27■■□□□ 1.64
ITM2C-204ENST00000409704 KRT27Q7Z3Y8 459 aa25.26■■□□□ 1.63
ITM2C-204ENST00000409704 AATKQ6ZMQ8 1374 aa25.26■■□□□ 1.63
ITM2C-204ENST00000409704 RGPD5Q99666 1765 aa25.26■■□□□ 1.63
ITM2C-204ENST00000409704 SLC12A5Q9H2X9 1139 aa25.25■■□□□ 1.63
ITM2C-204ENST00000409704 USP31Q70CQ4 1352 aa25.25■■□□□ 1.63
ITM2C-204ENST00000409704 LTN1O94822 1766 aa25.24■■□□□ 1.63
ITM2C-204ENST00000409704 PARP4Q9UKK3 1724 aaKnown RBP25.24■■□□□ 1.63
ITM2C-204ENST00000409704 HDGFL2Q7Z4V5 671 aaPredicted RBP25.24■■□□□ 1.63
ITM2C-204ENST00000409704 RGPD1P0DJD0 1748 aa25.23■■□□□ 1.63
ITM2C-204ENST00000409704 SLC24A1O60721 1099 aa25.23■■□□□ 1.63
ITM2C-204ENST00000409704 MYOM1P52179 1685 aa25.23■■□□□ 1.63
ITM2C-204ENST00000409704 ZBTB7CA1YPR0 619 aa25.22■■□□□ 1.63
ITM2C-204ENST00000409704 EVA1CP58658 441 aa25.22■■□□□ 1.63
ITM2C-204ENST00000409704 LARP1Q6PKG0 1096 aaKnown RBP25.22■■□□□ 1.63
ITM2C-204ENST00000409704 CCDC125Q86Z20 511 aa25.22■■□□□ 1.63
ITM2C-204ENST00000409704 KCNH5Q8NCM2 988 aa25.22■■□□□ 1.63
ITM2C-204ENST00000409704 OVOS2A0A0J9YW53 1432 aa25.21■■□□□ 1.63
ITM2C-204ENST00000409704 CRB1P82279 1406 aa25.21■■□□□ 1.63
ITM2C-204ENST00000409704 OVOS2Q6IE36 1432 aa25.21■■□□□ 1.63
ITM2C-204ENST00000409704 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms