RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 SCN11AQ9UI33 1791 aa6.92□□□□□ -1.3
R3HDM1-203ENST00000409606 NCBP3Q53F19 620 aaKnown RBP6.92□□□□□ -1.3
R3HDM1-203ENST00000409606 PRR36Q9H6K5 1346 aa6.92□□□□□ -1.3
R3HDM1-203ENST00000409606 AMER1Q5JTC6 1135 aaPredicted RBP6.91□□□□□ -1.3
R3HDM1-203ENST00000409606 A0A1W2PP64 1363 aa6.91□□□□□ -1.3
R3HDM1-203ENST00000409606 ST20-MTHFSA0A0A6YYL1 179 aa6.9□□□□□ -1.3
R3HDM1-203ENST00000409606 SBNO1A3KN83 1393 aa6.9□□□□□ -1.3
R3HDM1-203ENST00000409606 PPIP5K1Q6PFW1 1433 aa6.89□□□□□ -1.31
R3HDM1-203ENST00000409606 USP19O94966 1318 aa6.89□□□□□ -1.31
R3HDM1-203ENST00000409606 NEUROD1Q13562 356 aa6.89□□□□□ -1.31
R3HDM1-203ENST00000409606 ANKLE2Q86XL3 938 aa6.89□□□□□ -1.31
R3HDM1-203ENST00000409606 COL24A1Q17RW2 1714 aa6.89□□□□□ -1.31
R3HDM1-203ENST00000409606 CARD11Q9BXL7 1154 aa6.89□□□□□ -1.31
R3HDM1-203ENST00000409606 TOGARAM1Q9Y4F4 1720 aa6.89□□□□□ -1.31
R3HDM1-203ENST00000409606 HSPA1LP34931 641 aa6.89□□□□□ -1.31
R3HDM1-203ENST00000409606 LAMB4A4D0S4 1761 aa6.88□□□□□ -1.31
R3HDM1-203ENST00000409606 MRC1P22897 1456 aa6.88□□□□□ -1.31
R3HDM1-203ENST00000409606 CARD14Q9BXL6 1004 aa6.88□□□□□ -1.31
R3HDM1-203ENST00000409606 CCER2I3L3R5 266 aa6.88□□□□□ -1.31
R3HDM1-203ENST00000409606 WASLO00401 505 aaPredicted RBP6.87□□□□□ -1.31
R3HDM1-203ENST00000409606 TXNDC2Q86VQ3 553 aa6.87□□□□□ -1.31
R3HDM1-203ENST00000409606 RTL1A6NKG5 1358 aa6.87□□□□□ -1.31
R3HDM1-203ENST00000409606 QSER1Q2KHR3 1735 aa6.86□□□□□ -1.31
R3HDM1-203ENST00000409606 SBF2Q86WG5 1849 aa6.86□□□□□ -1.31
R3HDM1-203ENST00000409606 EVC2Q86UK5 1308 aa6.86□□□□□ -1.31
R3HDM1-203ENST00000409606 ZNF335Q9H4Z2 1342 aaPredicted RBP6.86□□□□□ -1.31
R3HDM1-203ENST00000409606 MLECQ14165 292 aa6.86□□□□□ -1.31
R3HDM1-203ENST00000409606 CPDO75976 1380 aa6.85□□□□□ -1.31
R3HDM1-203ENST00000409606 TMF1P82094 1093 aa6.85□□□□□ -1.31
R3HDM1-203ENST00000409606 EID1Q9Y6B2 187 aa6.85□□□□□ -1.31
R3HDM1-203ENST00000409606 CDCA8Q53HL2 280 aa6.85□□□□□ -1.31
R3HDM1-203ENST00000409606 ZNF772Q68DY9 489 aaPredicted RBP6.85□□□□□ -1.31
R3HDM1-203ENST00000409606 SPATA31A6Q5VVP1 1343 aa6.84□□□□□ -1.31
R3HDM1-203ENST00000409606 NCKAP5LQ9HCH0 1330 aa6.84□□□□□ -1.31
R3HDM1-203ENST00000409606 OVOS2A0A0G2JMS6 1433 aa6.84□□□□□ -1.31
R3HDM1-203ENST00000409606 COL5A3P25940 1745 aaPredicted RBP6.84□□□□□ -1.31
R3HDM1-203ENST00000409606 NSD3Q9BZ95 1437 aa6.84□□□□□ -1.31
R3HDM1-203ENST00000409606 AMOTL2Q9Y2J4 779 aa6.84□□□□□ -1.31
R3HDM1-203ENST00000409606 CACNA1FO60840 1977 aa6.84□□□□□ -1.32
R3HDM1-203ENST00000409606 TNS3Q68CZ2 1445 aa6.84□□□□□ -1.32
R3HDM1-203ENST00000409606 PRKCSHP14314 528 aaPredicted RBP6.83□□□□□ -1.32
R3HDM1-203ENST00000409606 RGL3Q3MIN7 710 aa6.83□□□□□ -1.32
R3HDM1-203ENST00000409606 PRAM1Q96QH2 718 aa6.83□□□□□ -1.32
R3HDM1-203ENST00000409606 TTC21AQ8NDW8 1320 aa6.83□□□□□ -1.32
R3HDM1-203ENST00000409606 KDRP35968 1356 aa6.83□□□□□ -1.32
R3HDM1-203ENST00000409606 LY75O60449 1722 aa6.83□□□□□ -1.32
R3HDM1-203ENST00000409606 TMEM132EQ6IEE7 984 aa6.83□□□□□ -1.32
R3HDM1-203ENST00000409606 SOS2Q07890 1332 aaPredicted RBP6.83□□□□□ -1.32
R3HDM1-203ENST00000409606 JCADQ9P266 1359 aa6.83□□□□□ -1.32
R3HDM1-203ENST00000409606 TMEM94Q12767 1356 aa6.82□□□□□ -1.32
R3HDM1-203ENST00000409606 CASZ1Q86V15 1759 aa6.82□□□□□ -1.32
R3HDM1-203ENST00000409606 ITGB4P16144 1822 aa6.82□□□□□ -1.32
R3HDM1-203ENST00000409606 PRKRIP1Q9H875 184 aaPredicted RBP6.82□□□□□ -1.32
R3HDM1-203ENST00000409606 LRP5O75197 1615 aa6.81□□□□□ -1.32
R3HDM1-203ENST00000409606 C5P01031 1676 aa6.81□□□□□ -1.32
R3HDM1-203ENST00000409606 NHSQ6T4R5 1651 aa6.81□□□□□ -1.32
R3HDM1-203ENST00000409606 RALBP1Q15311 655 aa6.8□□□□□ -1.32
R3HDM1-203ENST00000409606 CCDC125Q86Z20 511 aa6.8□□□□□ -1.32
R3HDM1-203ENST00000409606 CDK19Q9BWU1 502 aa6.8□□□□□ -1.32
R3HDM1-203ENST00000409606 NUP188Q5SRE5 1749 aa6.8□□□□□ -1.32
R3HDM1-203ENST00000409606 DISP2A7MBM2 1401 aa6.8□□□□□ -1.32
R3HDM1-203ENST00000409606 ZNF521Q96K83 1311 aa6.8□□□□□ -1.32
R3HDM1-203ENST00000409606 ZNF326Q5BKZ1 582 aaKnown RBP6.8□□□□□ -1.32
R3HDM1-203ENST00000409606 MYT1LQ9UL68 1186 aa6.8□□□□□ -1.32
R3HDM1-203ENST00000409606 TJP1Q07157 1748 aa6.79□□□□□ -1.32
R3HDM1-203ENST00000409606 SLIT2O94813 1529 aa6.79□□□□□ -1.32
R3HDM1-203ENST00000409606 KDM2AQ9Y2K7 1162 aa6.79□□□□□ -1.32
R3HDM1-203ENST00000409606 TNS1Q9HBL0 1735 aaKnown RBP6.79□□□□□ -1.32
R3HDM1-203ENST00000409606 WAPLQ7Z5K2 1190 aa6.79□□□□□ -1.32
R3HDM1-203ENST00000409606 ZNF692Q9BU19 519 aaPredicted RBP6.79□□□□□ -1.32
R3HDM1-203ENST00000409606 CGNL1Q0VF96 1302 aa6.78□□□□□ -1.32
R3HDM1-203ENST00000409606 MYBBP1AQ9BQG0 1328 aaKnown RBP6.78□□□□□ -1.32
R3HDM1-203ENST00000409606 BCL9O00512 1426 aa6.78□□□□□ -1.32
R3HDM1-203ENST00000409606 CCDC61Q9Y6R9 512 aa6.78□□□□□ -1.32
R3HDM1-203ENST00000409606 TAF1LQ8IZX4 1826 aa6.78□□□□□ -1.32
R3HDM1-203ENST00000409606 BCORQ6W2J9 1755 aa6.78□□□□□ -1.32
R3HDM1-203ENST00000409606 C19orf44Q9H6X5 657 aa6.78□□□□□ -1.32
R3HDM1-203ENST00000409606 NUDT16Q96DE0 195 aaKnown RBP6.77□□□□□ -1.33
R3HDM1-203ENST00000409606 TRAK1Q9UPV9 953 aa6.77□□□□□ -1.33
R3HDM1-203ENST00000409606 FYB1O15117 783 aa6.77□□□□□ -1.33
R3HDM1-203ENST00000409606 BRWD3Q6RI45 1802 aa6.76□□□□□ -1.33
R3HDM1-203ENST00000409606 TUBGCP6Q96RT7 1819 aa6.76□□□□□ -1.33
R3HDM1-203ENST00000409606 ARHGEF10O15013 1369 aa6.76□□□□□ -1.33
R3HDM1-203ENST00000409606 LAMB2P55268 1798 aa6.76□□□□□ -1.33
R3HDM1-203ENST00000409606 PIP4K2BP78356 416 aa6.76□□□□□ -1.33
R3HDM1-203ENST00000409606 PLPPR3Q6T4P5 718 aa6.76□□□□□ -1.33
R3HDM1-203ENST00000409606 TTC21BQ7Z4L5 1316 aa6.76□□□□□ -1.33
R3HDM1-203ENST00000409606 IBTKQ9P2D0 1353 aaPredicted RBP6.76□□□□□ -1.33
R3HDM1-203ENST00000409606 PANK3Q9H999 370 aa6.75□□□□□ -1.33
R3HDM1-203ENST00000409606 DOT1LQ8TEK3 1739 aa6.75□□□□□ -1.33
R3HDM1-203ENST00000409606 PNISRQ8TF01 805 aaKnown RBP6.75□□□□□ -1.33
R3HDM1-203ENST00000409606 COL5A2P05997 1499 aaPredicted RBP6.75□□□□□ -1.33
R3HDM1-203ENST00000409606 UPF1Q92900 1129 aaKnown RBP eCLIP6.75□□□□□ -1.33
R3HDM1-203ENST00000409606 ANKRD36CQ5JPF3 1778 aa6.75□□□□□ -1.33
R3HDM1-203ENST00000409606 ERICH6Q7L0X2 663 aa6.74□□□□□ -1.33
R3HDM1-203ENST00000409606 TRMT2AQ8IZ69 625 aaKnown RBP6.74□□□□□ -1.33
R3HDM1-203ENST00000409606 SLC26A8Q96RN1 970 aa6.74□□□□□ -1.33
R3HDM1-203ENST00000409606 ACEP12821 1306 aa6.74□□□□□ -1.33
R3HDM1-203ENST00000409606 MSH6P52701 1360 aa6.74□□□□□ -1.33
R3HDM1-203ENST00000409606 PLEKHF1Q96S99 279 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms