RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 TRAPPC8Q9Y2L5 1435 aa20.13■□□□□ 0.81
PTPRN2-205ENST00000409483 TCOF1Q13428 1488 aaKnown RBP20.13■□□□□ 0.81
PTPRN2-205ENST00000409483 VPS37CA5D8V6 355 aaPredicted RBP20.12■□□□□ 0.81
PTPRN2-205ENST00000409483 CCDC30Q5VVM6 783 aa20.12■□□□□ 0.81
PTPRN2-205ENST00000409483 PRAG1Q86YV5 1406 aa20.12■□□□□ 0.81
PTPRN2-205ENST00000409483 GPRASP1Q5JY77 1395 aa20.12■□□□□ 0.81
PTPRN2-205ENST00000409483 FOSBP53539 338 aa20.12■□□□□ 0.81
PTPRN2-205ENST00000409483 WDR62O43379 1518 aa20.11■□□□□ 0.81
PTPRN2-205ENST00000409483 MAP4K4O95819 1239 aaPredicted RBP20.11■□□□□ 0.81
PTPRN2-205ENST00000409483 ZKSCAN1P17029 563 aaPredicted RBP20.11■□□□□ 0.81
PTPRN2-205ENST00000409483 CFAP43Q8NDM7 1665 aa20.11■□□□□ 0.81
PTPRN2-205ENST00000409483 TRAK2O60296 914 aa20.11■□□□□ 0.81
PTPRN2-205ENST00000409483 DDX58O95786 925 aaKnown RBP20.11■□□□□ 0.81
PTPRN2-205ENST00000409483 RALGAPBQ86X10 1494 aa20.11■□□□□ 0.81
PTPRN2-205ENST00000409483 NKTRP30414 1462 aaKnown RBP20.11■□□□□ 0.81
PTPRN2-205ENST00000409483 GCC1Q96CN9 775 aa20.11■□□□□ 0.81
PTPRN2-205ENST00000409483 H3BQV1 296 aa20.1■□□□□ 0.81
PTPRN2-205ENST00000409483 CDK11BP21127 795 aaKnown RBP20.1■□□□□ 0.81
PTPRN2-205ENST00000409483 GTF2E1P29083 439 aaPredicted RBP20.1■□□□□ 0.81
PTPRN2-205ENST00000409483 SKOR2Q2VWA4 1001 aaPredicted RBP20.1■□□□□ 0.81
PTPRN2-205ENST00000409483 IFFO2Q5TF58 517 aa20.1■□□□□ 0.81
PTPRN2-205ENST00000409483 TNNQ9UQP3 1299 aa20.1■□□□□ 0.81
PTPRN2-205ENST00000409483 DHX29Q7Z478 1369 aaKnown RBP20.1■□□□□ 0.81
PTPRN2-205ENST00000409483 NRDCO43847 1150 aa20.1■□□□□ 0.81
PTPRN2-205ENST00000409483 TRIM27P14373 513 aa20.1■□□□□ 0.81
PTPRN2-205ENST00000409483 GNAI3P08754 354 aa20.09■□□□□ 0.81
PTPRN2-205ENST00000409483 RUFY2Q8WXA3 655 aa20.09■□□□□ 0.81
PTPRN2-205ENST00000409483 NEUROD6Q96NK8 337 aa20.09■□□□□ 0.81
PTPRN2-205ENST00000409483 FAM83GA6ND36 823 aa20.09■□□□□ 0.81
PTPRN2-205ENST00000409483 FAM184AQ8NB25 1140 aa20.09■□□□□ 0.81
PTPRN2-205ENST00000409483 IL1RAPL2Q9NP60 686 aa20.09■□□□□ 0.81
PTPRN2-205ENST00000409483 PER1O15534 1290 aaPredicted RBP20.08■□□□□ 0.81
PTPRN2-205ENST00000409483 PZPP20742 1482 aa20.08■□□□□ 0.81
PTPRN2-205ENST00000409483 GNAI2P04899 355 aa20.08■□□□□ 0.8
PTPRN2-205ENST00000409483 EXOC6BQ9Y2D4 811 aa20.08■□□□□ 0.8
PTPRN2-205ENST00000409483 ATF3P18847 181 aa20.08■□□□□ 0.8
PTPRN2-205ENST00000409483 USHBP1Q8N6Y0 703 aa20.07■□□□□ 0.8
PTPRN2-205ENST00000409483 RNF214Q8ND24 703 aa20.07■□□□□ 0.8
PTPRN2-205ENST00000409483 KIAA0556O60303 1618 aa20.07■□□□□ 0.8
PTPRN2-205ENST00000409483 LRPPRCP42704 1394 aaKnown RBP20.07■□□□□ 0.8
PTPRN2-205ENST00000409483 CT47B1P0C2W7 299 aaPredicted RBP20.07■□□□□ 0.8
PTPRN2-205ENST00000409483 SF3A1Q15459 793 aaKnown RBP20.07■□□□□ 0.8
PTPRN2-205ENST00000409483 HTATSF1O43719 755 aaKnown RBP20.07■□□□□ 0.8
PTPRN2-205ENST00000409483 SMARCA5O60264 1052 aaPredicted RBP20.07■□□□□ 0.8
PTPRN2-205ENST00000409483 CARD14Q9BXL6 1004 aa20.07■□□□□ 0.8
PTPRN2-205ENST00000409483 FAM135AQ9P2D6 1515 aa20.07■□□□□ 0.8
PTPRN2-205ENST00000409483 ZNF530Q6P9A1 599 aaPredicted RBP20.06■□□□□ 0.8
PTPRN2-205ENST00000409483 PROSER2Q86WR7 435 aaPredicted RBP20.06■□□□□ 0.8
PTPRN2-205ENST00000409483 THEMISQ8N1K5 641 aaPredicted RBP20.06■□□□□ 0.8
PTPRN2-205ENST00000409483 F6X3S4 739 aa20.06■□□□□ 0.8
PTPRN2-205ENST00000409483 ADAMTS12P58397 1594 aa20.06■□□□□ 0.8
PTPRN2-205ENST00000409483 PARD3Q8TEW0 1356 aa20.05■□□□□ 0.8
PTPRN2-205ENST00000409483 PLCH2O75038 1416 aa20.05■□□□□ 0.8
PTPRN2-205ENST00000409483 SPINK5Q9NQ38 1064 aaPredicted RBP20.05■□□□□ 0.8
PTPRN2-205ENST00000409483 CLASRPQ8N2M8 674 aaKnown RBP20.05■□□□□ 0.8
PTPRN2-205ENST00000409483 SIL1Q9H173 461 aa20.05■□□□□ 0.8
PTPRN2-205ENST00000409483 DISP1Q96F81 1524 aa20.05■□□□□ 0.8
PTPRN2-205ENST00000409483 NUCB2P80303 420 aa20.04■□□□□ 0.8
PTPRN2-205ENST00000409483 SMC3Q9UQE7 1217 aa20.04■□□□□ 0.8
PTPRN2-205ENST00000409483 MAGI3Q5TCQ9 1506 aa20.04■□□□□ 0.8
PTPRN2-205ENST00000409483 CCDC27Q2M243 656 aa20.04■□□□□ 0.8
PTPRN2-205ENST00000409483 KDM5BQ9UGL1 1544 aa20.03■□□□□ 0.8
PTPRN2-205ENST00000409483 CAVIN1Q6NZI2 390 aaKnown RBP20.03■□□□□ 0.8
PTPRN2-205ENST00000409483 PLEKHH1Q9ULM0 1364 aa20.03■□□□□ 0.8
PTPRN2-205ENST00000409483 APPP05067 770 aa20.03■□□□□ 0.8
PTPRN2-205ENST00000409483 CSPP1Q1MSJ5 1256 aa20.03■□□□□ 0.8
PTPRN2-205ENST00000409483 PHF14O94880 888 aa20.02■□□□□ 0.8
PTPRN2-205ENST00000409483 PCDHB15Q9Y5E8 787 aa20.02■□□□□ 0.8
PTPRN2-205ENST00000409483 NINLQ9Y2I6 1382 aa20.02■□□□□ 0.8
PTPRN2-205ENST00000409483 ZC3H6P61129 1189 aaKnown RBP20.02■□□□□ 0.8
PTPRN2-205ENST00000409483 WASLO00401 505 aaPredicted RBP20.02■□□□□ 0.8
PTPRN2-205ENST00000409483 ERC2O15083 957 aa20.01■□□□□ 0.79
PTPRN2-205ENST00000409483 FYB1O15117 783 aa20.01■□□□□ 0.79
PTPRN2-205ENST00000409483 PRPF40AO75400 957 aaKnown RBP20.01■□□□□ 0.79
PTPRN2-205ENST00000409483 ZRANB1Q9UGI0 708 aa20.01■□□□□ 0.79
PTPRN2-205ENST00000409483 ATP6V1DQ9Y5K8 247 aa20.01■□□□□ 0.79
PTPRN2-205ENST00000409483 MYL6BP14649 208 aa20.01■□□□□ 0.79
PTPRN2-205ENST00000409483 HSP90AB4PQ58FF6 505 aa20.01■□□□□ 0.79
PTPRN2-205ENST00000409483 CREBRFQ8IUR6 639 aa20.01■□□□□ 0.79
PTPRN2-205ENST00000409483 PLEKHO1Q53GL0 409 aaPredicted RBP20.01■□□□□ 0.79
PTPRN2-205ENST00000409483 FBXW7Q969H0 707 aa20■□□□□ 0.79
PTPRN2-205ENST00000409483 FSD1Q9BTV5 496 aa20■□□□□ 0.79
PTPRN2-205ENST00000409483 KIF21AQ7Z4S6 1674 aa19.99■□□□□ 0.79
PTPRN2-205ENST00000409483 FAM177BA6PVY3 158 aa19.99■□□□□ 0.79
PTPRN2-205ENST00000409483 LRRCC1Q9C099 1032 aa19.99■□□□□ 0.79
PTPRN2-205ENST00000409483 SRCIN1Q9C0H9 1055 aa19.99■□□□□ 0.79
PTPRN2-205ENST00000409483 SRGAP3O43295 1099 aa19.99■□□□□ 0.79
PTPRN2-205ENST00000409483 DNAJC2Q99543 621 aaKnown RBP19.98■□□□□ 0.79
PTPRN2-205ENST00000409483 CCT4P50991 539 aaKnown RBP19.98■□□□□ 0.79
PTPRN2-205ENST00000409483 STRN4Q9NRL3 753 aa19.98■□□□□ 0.79
PTPRN2-205ENST00000409483 KDM4AO75164 1064 aa19.97■□□□□ 0.79
PTPRN2-205ENST00000409483 RLBP1P12271 317 aa19.97■□□□□ 0.79
PTPRN2-205ENST00000409483 RABEP1Q15276 862 aa19.97■□□□□ 0.79
PTPRN2-205ENST00000409483 CNTROBQ8N137 903 aa19.97■□□□□ 0.79
PTPRN2-205ENST00000409483 BICD2Q8TD16 824 aa19.97■□□□□ 0.79
PTPRN2-205ENST00000409483 AMOTL2Q9Y2J4 779 aa19.97■□□□□ 0.79
PTPRN2-205ENST00000409483 RNF20Q5VTR2 975 aa19.96■□□□□ 0.79
PTPRN2-205ENST00000409483 MPNDQ8N594 471 aa19.96■□□□□ 0.79
PTPRN2-205ENST00000409483 NUTM1Q86Y26 1132 aa19.96■□□□□ 0.79
PTPRN2-205ENST00000409483 K7ELQ4 463 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms