RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 MARF1Q9Y4F3 1742 aaKnown RBP22.88■■□□□ 1.25
SSB-202ENST00000409333 TTC21BQ7Z4L5 1316 aa22.88■■□□□ 1.25
SSB-202ENST00000409333 MYBBP1AQ9BQG0 1328 aaKnown RBP22.88■■□□□ 1.25
SSB-202ENST00000409333 CCER2I3L3R5 266 aa22.88■■□□□ 1.25
SSB-202ENST00000409333 GGNBP2Q9H3C7 697 aa22.88■■□□□ 1.25
SSB-202ENST00000409333 NME9Q86XW9 330 aa22.86■■□□□ 1.25
SSB-202ENST00000409333 MAP2P11137 1827 aaKnown RBP22.85■■□□□ 1.25
SSB-202ENST00000409333 USP54Q70EL1 1684 aa22.85■■□□□ 1.25
SSB-202ENST00000409333 CCDC184Q52MB2 194 aa22.85■■□□□ 1.25
SSB-202ENST00000409333 MORC1Q86VD1 984 aa22.84■■□□□ 1.25
SSB-202ENST00000409333 FOXO3O43524 673 aa22.84■■□□□ 1.25
SSB-202ENST00000409333 SLAIN2Q9P270 581 aa22.84■■□□□ 1.25
SSB-202ENST00000409333 ZRANB1Q9UGI0 708 aa22.83■■□□□ 1.24
SSB-202ENST00000409333 TTC21AQ8NDW8 1320 aa22.82■■□□□ 1.24
SSB-202ENST00000409333 NHSL1Q5SYE7 1610 aa22.81■■□□□ 1.24
SSB-202ENST00000409333 PPP2R1AP30153 589 aa22.81■■□□□ 1.24
SSB-202ENST00000409333 PSME1Q06323 249 aa22.81■■□□□ 1.24
SSB-202ENST00000409333 ALS2Q96Q42 1657 aa22.81■■□□□ 1.24
SSB-202ENST00000409333 TNNT2P45379 298 aaPredicted RBP22.81■■□□□ 1.24
SSB-202ENST00000409333 XPCQ01831 940 aaPredicted RBP22.81■■□□□ 1.24
SSB-202ENST00000409333 BRINP3Q76B58 766 aa22.81■■□□□ 1.24
SSB-202ENST00000409333 ROBO1Q9Y6N7 1651 aa22.81■■□□□ 1.24
SSB-202ENST00000409333 OVOS2A0A0J9YW53 1432 aa22.8■■□□□ 1.24
SSB-202ENST00000409333 OVOS2Q6IE36 1432 aa22.8■■□□□ 1.24
SSB-202ENST00000409333 BRD4O60885 1362 aaPredicted RBP22.79■■□□□ 1.24
SSB-202ENST00000409333 NLRP13Q86W25 1043 aa22.79■■□□□ 1.24
SSB-202ENST00000409333 DDX17Q92841 729 aaKnown RBP22.79■■□□□ 1.24
SSB-202ENST00000409333 MRS2Q9HD23 443 aa22.78■■□□□ 1.24
SSB-202ENST00000409333 PAK3O75914 559 aaPredicted RBP22.78■■□□□ 1.24
SSB-202ENST00000409333 PXDNQ92626 1479 aa22.78■■□□□ 1.24
SSB-202ENST00000409333 KRT28Q7Z3Y7 464 aa22.76■■□□□ 1.23
SSB-202ENST00000409333 COG3Q96JB2 828 aa22.76■■□□□ 1.23
SSB-202ENST00000409333 NPHP3Q7Z494 1330 aa22.75■■□□□ 1.23
SSB-202ENST00000409333 USP31Q70CQ4 1352 aa22.75■■□□□ 1.23
SSB-202ENST00000409333 ABTB2Q8N961 1025 aa22.73■■□□□ 1.23
SSB-202ENST00000409333 NUTM2GQ5VZR2 741 aa22.73■■□□□ 1.23
SSB-202ENST00000409333 LTN1O94822 1766 aa22.71■■□□□ 1.23
SSB-202ENST00000409333 FBLN1P23142 703 aa22.71■■□□□ 1.23
SSB-202ENST00000409333 IQSEC2Q5JU85 1478 aa22.71■■□□□ 1.23
SSB-202ENST00000409333 SCAF1Q9H7N4 1312 aaKnown RBP22.71■■□□□ 1.23
SSB-202ENST00000409333 SHPRHQ149N8 1683 aa22.71■■□□□ 1.23
SSB-202ENST00000409333 NLRP6P59044 892 aa22.7■■□□□ 1.22
SSB-202ENST00000409333 CRYBG1Q9Y4K1 1723 aa22.7■■□□□ 1.22
SSB-202ENST00000409333 SBNO1A3KN83 1393 aa22.69■■□□□ 1.22
SSB-202ENST00000409333 TNS3Q68CZ2 1445 aa22.68■■□□□ 1.22
SSB-202ENST00000409333 AATKQ6ZMQ8 1374 aa22.68■■□□□ 1.22
SSB-202ENST00000409333 MTHFSP49914 203 aa22.68■■□□□ 1.22
SSB-202ENST00000409333 PEAK1Q9H792 1746 aa22.68■■□□□ 1.22
SSB-202ENST00000409333 AHDC1Q5TGY3 1603 aaPredicted RBP22.67■■□□□ 1.22
SSB-202ENST00000409333 PHRF1Q9P1Y6 1649 aaKnown RBP22.67■■□□□ 1.22
SSB-202ENST00000409333 LMOD2Q6P5Q4 547 aa22.66■■□□□ 1.22
SSB-202ENST00000409333 SLIT3O75094 1523 aa22.66■■□□□ 1.22
SSB-202ENST00000409333 SOS2Q07890 1332 aaPredicted RBP22.66■■□□□ 1.22
SSB-202ENST00000409333 SMG6Q86US8 1419 aaKnown RBP22.66■■□□□ 1.22
SSB-202ENST00000409333 PHLPP1O60346 1717 aa22.65■■□□□ 1.22
SSB-202ENST00000409333 MED1Q15648 1581 aaPredicted RBP22.65■■□□□ 1.22
SSB-202ENST00000409333 SOX12O15370 315 aa22.65■■□□□ 1.22
SSB-202ENST00000409333 NFAT5O94916 1531 aa22.65■■□□□ 1.22
SSB-202ENST00000409333 RRS1Q15050 365 aaKnown RBP22.64■■□□□ 1.22
SSB-202ENST00000409333 FAM9BQ8IZU0 186 aa22.64■■□□□ 1.22
SSB-202ENST00000409333 CERKQ8TCT0 537 aa22.64■■□□□ 1.22
SSB-202ENST00000409333 PNISRQ8TF01 805 aaKnown RBP22.64■■□□□ 1.22
SSB-202ENST00000409333 POLKQ9UBT6 870 aa22.64■■□□□ 1.22
SSB-202ENST00000409333 ABCA3Q99758 1704 aa22.64■■□□□ 1.21
SSB-202ENST00000409333 COL3A1P02461 1466 aaPredicted RBP22.64■■□□□ 1.21
SSB-202ENST00000409333 SPATA31A3Q5VYP0 1347 aa22.64■■□□□ 1.21
SSB-202ENST00000409333 TOM1O60784 492 aa22.63■■□□□ 1.21
SSB-202ENST00000409333 EMILIN1Q9Y6C2 1016 aa22.63■■□□□ 1.21
SSB-202ENST00000409333 CDK12Q9NYV4 1490 aaPredicted RBP22.62■■□□□ 1.21
SSB-202ENST00000409333 YTHDC1Q96MU7 727 aaKnown RBP22.62■■□□□ 1.21
SSB-202ENST00000409333 UBAP1LF5GYI3 381 aa22.61■■□□□ 1.21
SSB-202ENST00000409333 USP19O94966 1318 aa22.6■■□□□ 1.21
SSB-202ENST00000409333 PPM1GO15355 546 aaPredicted RBP22.6■■□□□ 1.21
SSB-202ENST00000409333 PLEKHG5O94827 1062 aa22.6■■□□□ 1.21
SSB-202ENST00000409333 PIP4K2BP78356 416 aa22.6■■□□□ 1.21
SSB-202ENST00000409333 COL16A1Q07092 1604 aaPredicted RBP22.59■■□□□ 1.21
SSB-202ENST00000409333 ARHGEF10O15013 1369 aa22.59■■□□□ 1.21
SSB-202ENST00000409333 CFAP53Q96M91 514 aa22.58■■□□□ 1.21
SSB-202ENST00000409333 PNPLA6Q8IY17 1366 aa22.58■■□□□ 1.21
SSB-202ENST00000409333 RGPD5Q99666 1765 aa22.57■■□□□ 1.2
SSB-202ENST00000409333 MAP3K19Q56UN5 1328 aa22.57■■□□□ 1.2
SSB-202ENST00000409333 KCNH5Q8NCM2 988 aa22.55■■□□□ 1.2
SSB-202ENST00000409333 INSRP06213 1382 aa22.55■■□□□ 1.2
SSB-202ENST00000409333 GCP02774 474 aa22.54■■□□□ 1.2
SSB-202ENST00000409333 CABLES1Q8TDN4 633 aa22.53■■□□□ 1.2
SSB-202ENST00000409333 COL22A1Q8NFW1 1626 aaPredicted RBP22.53■■□□□ 1.2
SSB-202ENST00000409333 WDR43Q15061 677 aaKnown RBP eCLIP22.53■■□□□ 1.2
SSB-202ENST00000409333 FLT4P35916 1363 aa22.51■■□□□ 1.19
SSB-202ENST00000409333 ADAMTS8Q9UP79 889 aa22.51■■□□□ 1.19
SSB-202ENST00000409333 RGPD1P0DJD0 1748 aa22.51■■□□□ 1.19
SSB-202ENST00000409333 COL18A1P39060 1754 aa22.5■■□□□ 1.19
SSB-202ENST00000409333 DIAPH1O60610 1272 aaKnown RBP22.5■■□□□ 1.19
SSB-202ENST00000409333 RGPD2P0DJD1 1756 aa22.5■■□□□ 1.19
SSB-202ENST00000409333 KIF24Q5T7B8 1368 aa22.49■■□□□ 1.19
SSB-202ENST00000409333 AMPHP49418 695 aa22.49■■□□□ 1.19
SSB-202ENST00000409333 HSP90AB2PQ58FF8 381 aa22.49■■□□□ 1.19
SSB-202ENST00000409333 BLMP54132 1417 aaPredicted RBP22.49■■□□□ 1.19
SSB-202ENST00000409333 RTL1A6NKG5 1358 aa22.49■■□□□ 1.19
SSB-202ENST00000409333 LRRC59Q96AG4 307 aaKnown RBP22.48■■□□□ 1.19
SSB-202ENST00000409333 ZBTB7CA1YPR0 619 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms