RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 AFAP1Q8N556 730 aa20.22■□□□□ 0.83
COL4A3BP-204ENST00000405807 SHPRHQ149N8 1683 aa20.21■□□□□ 0.83
COL4A3BP-204ENST00000405807 TRAK2O60296 914 aa20.2■□□□□ 0.82
COL4A3BP-204ENST00000405807 DZIP1LQ8IYY4 767 aaKnown RBP20.2■□□□□ 0.82
COL4A3BP-204ENST00000405807 DEPDC5O75140 1603 aa20.2■□□□□ 0.82
COL4A3BP-204ENST00000405807 VGFO15240 615 aaPredicted RBP20.2■□□□□ 0.82
COL4A3BP-204ENST00000405807 CT47B1P0C2W7 299 aaPredicted RBP20.2■□□□□ 0.82
COL4A3BP-204ENST00000405807 GZF1Q9H116 711 aaPredicted RBP20.2■□□□□ 0.82
COL4A3BP-204ENST00000405807 ABCA6Q8N139 1617 aa20.2■□□□□ 0.82
COL4A3BP-204ENST00000405807 MFAP1P55081 439 aaKnown RBP20.19■□□□□ 0.82
COL4A3BP-204ENST00000405807 MTHFSP49914 203 aa20.18■□□□□ 0.82
COL4A3BP-204ENST00000405807 MRE11P49959 708 aa20.18■□□□□ 0.82
COL4A3BP-204ENST00000405807 ZBTB22O15209 634 aa20.18■□□□□ 0.82
COL4A3BP-204ENST00000405807 ZFYVE16Q7Z3T8 1539 aa20.17■□□□□ 0.82
COL4A3BP-204ENST00000405807 MAPK8IP2Q13387 824 aaPredicted RBP20.17■□□□□ 0.82
COL4A3BP-204ENST00000405807 HDAC1Q13547 482 aaPredicted RBP20.17■□□□□ 0.82
COL4A3BP-204ENST00000405807 MTERF4Q7Z6M4 381 aaKnown RBP20.17■□□□□ 0.82
COL4A3BP-204ENST00000405807 HSCBQ8IWL3 235 aa20.17■□□□□ 0.82
COL4A3BP-204ENST00000405807 SLC12A5Q9H2X9 1139 aa20.17■□□□□ 0.82
COL4A3BP-204ENST00000405807 MYO3AQ8NEV4 1616 aa20.16■□□□□ 0.82
COL4A3BP-204ENST00000405807 DDX11L8A8MPP1 907 aa20.16■□□□□ 0.82
COL4A3BP-204ENST00000405807 ZNF518AQ6AHZ1 1483 aa20.16■□□□□ 0.82
COL4A3BP-204ENST00000405807 VWDEQ8N2E2 1590 aa20.16■□□□□ 0.82
COL4A3BP-204ENST00000405807 KIF3BO15066 747 aa20.16■□□□□ 0.82
COL4A3BP-204ENST00000405807 ISY1Q9ULR0 285 aaKnown RBP20.15■□□□□ 0.82
COL4A3BP-204ENST00000405807 DDX19BQ9UMR2 479 aa20.14■□□□□ 0.81
COL4A3BP-204ENST00000405807 GTPBP4Q9BZE4 634 aaKnown RBP20.13■□□□□ 0.81
COL4A3BP-204ENST00000405807 LETM1O95202 739 aaPredicted RBP20.13■□□□□ 0.81
COL4A3BP-204ENST00000405807 TRIM44Q96DX7 344 aaPredicted RBP20.13■□□□□ 0.81
COL4A3BP-204ENST00000405807 NRXN1Q9ULB1 1477 aa20.13■□□□□ 0.81
COL4A3BP-204ENST00000405807 U2AF1L5P0DN76 240 aaPredicted RBP20.12■□□□□ 0.81
COL4A3BP-204ENST00000405807 TERF1P54274 439 aa20.12■□□□□ 0.81
COL4A3BP-204ENST00000405807 U2AF1Q01081 240 aaKnown RBP eCLIP20.12■□□□□ 0.813e-9■■■□□ 19
COL4A3BP-204ENST00000405807 SMC4Q9NTJ3 1288 aa20.12■□□□□ 0.81
COL4A3BP-204ENST00000405807 TRAK1Q9UPV9 953 aa20.11■□□□□ 0.81
COL4A3BP-204ENST00000405807 HSP90B1P14625 803 aaKnown RBP20.1■□□□□ 0.81
COL4A3BP-204ENST00000405807 TAF3Q5VWG9 929 aa20.1■□□□□ 0.81
COL4A3BP-204ENST00000405807 UGGT1Q9NYU2 1555 aa20.1■□□□□ 0.81
COL4A3BP-204ENST00000405807 KIF1BO60333 1816 aa20.1■□□□□ 0.81
COL4A3BP-204ENST00000405807 SMC5Q8IY18 1101 aa20.1■□□□□ 0.81
COL4A3BP-204ENST00000405807 GRPEL1Q9HAV7 217 aa20.1■□□□□ 0.81
COL4A3BP-204ENST00000405807 ARAP3Q8WWN8 1544 aa20.1■□□□□ 0.81
COL4A3BP-204ENST00000405807 ITPRIPQ8IWB1 547 aa20.09■□□□□ 0.81
COL4A3BP-204ENST00000405807 ADGRL1O94910 1474 aa20.09■□□□□ 0.81
COL4A3BP-204ENST00000405807 SETBP1Q9Y6X0 1596 aa20.09■□□□□ 0.81
COL4A3BP-204ENST00000405807 TRIM27P14373 513 aa20.09■□□□□ 0.81
COL4A3BP-204ENST00000405807 CERS3Q8IU89 383 aa20.09■□□□□ 0.81
COL4A3BP-204ENST00000405807 ZNF692Q9BU19 519 aaPredicted RBP20.09■□□□□ 0.81
COL4A3BP-204ENST00000405807 OFD1O75665 1012 aa20.08■□□□□ 0.81
COL4A3BP-204ENST00000405807 ZCCHC11Q5TAX3 1644 aaKnown RBP20.08■□□□□ 0.81
COL4A3BP-204ENST00000405807 ATF7IPQ6VMQ6 1270 aa20.08■□□□□ 0.8
COL4A3BP-204ENST00000405807 SNX21Q969T3 373 aa20.08■□□□□ 0.8
COL4A3BP-204ENST00000405807 RBM25P49756 843 aaKnown RBP20.08■□□□□ 0.8
COL4A3BP-204ENST00000405807 USP32Q8NFA0 1604 aa20.08■□□□□ 0.8
COL4A3BP-204ENST00000405807 ATP7AQ04656 1500 aa20.07■□□□□ 0.8
COL4A3BP-204ENST00000405807 EXOSC9Q06265 439 aaKnown RBP20.07■□□□□ 0.8
COL4A3BP-204ENST00000405807 TSR2Q969E8 191 aaKnown RBP20.07■□□□□ 0.8
COL4A3BP-204ENST00000405807 NSD2O96028 1365 aa20.07■□□□□ 0.8
COL4A3BP-204ENST00000405807 CCDC94Q9BW85 323 aaPredicted RBP20.07■□□□□ 0.8
COL4A3BP-204ENST00000405807 IFT172Q9UG01 1749 aa20.07■□□□□ 0.8
COL4A3BP-204ENST00000405807 ERCC6L2Q5T890 1561 aa20.06■□□□□ 0.8
COL4A3BP-204ENST00000405807 DDIT3P35638 169 aa20.06■□□□□ 0.8
COL4A3BP-204ENST00000405807 C14orf93Q9H972 538 aaKnown RBP20.06■□□□□ 0.8
COL4A3BP-204ENST00000405807 NOS1P29475 1434 aa20.06■□□□□ 0.8
COL4A3BP-204ENST00000405807 NCOA3Q9Y6Q9 1424 aa20.06■□□□□ 0.8
COL4A3BP-204ENST00000405807 PUS7Q96PZ0 661 aaKnown RBP20.06■□□□□ 0.8
COL4A3BP-204ENST00000405807 CIZ1Q9ULV3 898 aaPredicted RBP20.06■□□□□ 0.8
COL4A3BP-204ENST00000405807 SSH1Q8WYL5 1049 aa20.05■□□□□ 0.8
COL4A3BP-204ENST00000405807 SLC52A1Q9NWF4 448 aa20.05■□□□□ 0.8
COL4A3BP-204ENST00000405807 HDAC5Q9UQL6 1122 aa20.05■□□□□ 0.8
COL4A3BP-204ENST00000405807 UHRF1BP1LA0JNW5 1464 aa20.05■□□□□ 0.8
COL4A3BP-204ENST00000405807 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.04■□□□□ 0.8
COL4A3BP-204ENST00000405807 CHD1O14646 1710 aa20.04■□□□□ 0.8
COL4A3BP-204ENST00000405807 PTMSP20962 102 aa20.04■□□□□ 0.8
COL4A3BP-204ENST00000405807 GBP4Q96PP9 640 aa20.04■□□□□ 0.8
COL4A3BP-204ENST00000405807 CGNQ9P2M7 1197 aaKnown RBP20.04■□□□□ 0.8
COL4A3BP-204ENST00000405807 CHGAP10645 457 aaKnown RBP20.03■□□□□ 0.8
COL4A3BP-204ENST00000405807 NOB1Q9ULX3 412 aaKnown RBP20.03■□□□□ 0.8
COL4A3BP-204ENST00000405807 IPO8O15397 1037 aaKnown RBP20.03■□□□□ 0.8
COL4A3BP-204ENST00000405807 SKOR2Q2VWA4 1001 aaPredicted RBP20.03■□□□□ 0.8
COL4A3BP-204ENST00000405807 ZBTB40Q9NUA8 1239 aa20.03■□□□□ 0.8
COL4A3BP-204ENST00000405807 ADGRB2O60241 1585 aa20.03■□□□□ 0.8
COL4A3BP-204ENST00000405807 INO80Q9ULG1 1556 aaPredicted RBP20.02■□□□□ 0.8
COL4A3BP-204ENST00000405807 NUCB1Q02818 461 aa20.02■□□□□ 0.8
COL4A3BP-204ENST00000405807 EFCAB6Q5THR3 1501 aa20.02■□□□□ 0.8
COL4A3BP-204ENST00000405807 IL16Q14005 1332 aa20.02■□□□□ 0.79
COL4A3BP-204ENST00000405807 TMPOP42166 694 aaKnown RBP20.02■□□□□ 0.79
COL4A3BP-204ENST00000405807 TNPO1Q92973 898 aaKnown RBP20.02■□□□□ 0.79
COL4A3BP-204ENST00000405807 ANKRD36BQ8N2N9 1353 aa20.01■□□□□ 0.79
COL4A3BP-204ENST00000405807 HSP90AB1P08238 724 aaKnown RBP20.01■□□□□ 0.79
COL4A3BP-204ENST00000405807 QRICH2Q9H0J4 1663 aa20.01■□□□□ 0.79
COL4A3BP-204ENST00000405807 EVC2Q86UK5 1308 aa20.01■□□□□ 0.79
COL4A3BP-204ENST00000405807 MMP14P50281 582 aa20.01■□□□□ 0.79
COL4A3BP-204ENST00000405807 TMEM57Q8N5G2 664 aa20.01■□□□□ 0.79
COL4A3BP-204ENST00000405807 R3HCC1Q9Y3T6 440 aaKnown RBP20.01■□□□□ 0.79
COL4A3BP-204ENST00000405807 FANCAO15360 1455 aa20.01■□□□□ 0.79
COL4A3BP-204ENST00000405807 AEBP1Q8IUX7 1158 aa20■□□□□ 0.79
COL4A3BP-204ENST00000405807 PLEKHF1Q96S99 279 aa20■□□□□ 0.79
COL4A3BP-204ENST00000405807 MROH1Q8NDA8 1641 aa20■□□□□ 0.79
COL4A3BP-204ENST00000405807 CLGNO14967 610 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms