RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 QRICH2Q9H0J4 1663 aa25.54■■□□□ 1.68
CCDC47-202ENST00000403162 WWC1Q8IX03 1113 aa25.54■■□□□ 1.68
CCDC47-202ENST00000403162 IGHDP01880 384 aa25.52■■□□□ 1.68
CCDC47-202ENST00000403162 DLC1Q96QB1 1528 aa25.52■■□□□ 1.68
CCDC47-202ENST00000403162 PTPRUQ92729 1446 aa25.51■■□□□ 1.67
CCDC47-202ENST00000403162 MAPK8IP3Q9UPT6 1336 aa25.51■■□□□ 1.67
CCDC47-202ENST00000403162 WAPLQ7Z5K2 1190 aa25.51■■□□□ 1.67
CCDC47-202ENST00000403162 CLUAP1Q96AJ1 413 aa25.51■■□□□ 1.67
CCDC47-202ENST00000403162 AMOTL2Q9Y2J4 779 aa25.49■■□□□ 1.67
CCDC47-202ENST00000403162 IQSEC2Q5JU85 1478 aa25.49■■□□□ 1.67
CCDC47-202ENST00000403162 TECPR2O15040 1411 aa25.49■■□□□ 1.67
CCDC47-202ENST00000403162 USP32Q8NFA0 1604 aa25.49■■□□□ 1.67
CCDC47-202ENST00000403162 KNDC1Q76NI1 1749 aa25.49■■□□□ 1.67
CCDC47-202ENST00000403162 AAMPQ13685 434 aa25.47■■□□□ 1.67
CCDC47-202ENST00000403162 NSD3Q9BZ95 1437 aa25.47■■□□□ 1.67
CCDC47-202ENST00000403162 MINK1Q8N4C8 1332 aaPredicted RBP25.47■■□□□ 1.67
CCDC47-202ENST00000403162 PIK3R4Q99570 1358 aa25.47■■□□□ 1.67
CCDC47-202ENST00000403162 CPS1P31327 1500 aa25.47■■□□□ 1.67
CCDC47-202ENST00000403162 USP19O94966 1318 aa25.46■■□□□ 1.67
CCDC47-202ENST00000403162 SIRT1Q96EB6 747 aa25.46■■□□□ 1.67
CCDC47-202ENST00000403162 ROBO2Q9HCK4 1378 aa25.46■■□□□ 1.67
CCDC47-202ENST00000403162 FAM135BQ49AJ0 1406 aa25.45■■□□□ 1.66
CCDC47-202ENST00000403162 PHF23Q9BUL5 403 aaPredicted RBP25.45■■□□□ 1.66
CCDC47-202ENST00000403162 CANXP27824 592 aaKnown RBP25.44■■□□□ 1.66
CCDC47-202ENST00000403162 RUNDC1Q96C34 613 aa25.44■■□□□ 1.66
CCDC47-202ENST00000403162 PANK1Q8TE04 598 aa25.44■■□□□ 1.66
CCDC47-202ENST00000403162 COG6Q9Y2V7 657 aa25.44■■□□□ 1.66
CCDC47-202ENST00000403162 EVC2Q86UK5 1308 aa25.43■■□□□ 1.66
CCDC47-202ENST00000403162 MORC1Q86VD1 984 aa25.42■■□□□ 1.66
CCDC47-202ENST00000403162 FRAT1Q92837 279 aaPredicted RBP25.42■■□□□ 1.66
CCDC47-202ENST00000403162 KCNA6P17658 529 aa25.41■■□□□ 1.66
CCDC47-202ENST00000403162 RARSP54136 660 aaKnown RBP25.41■■□□□ 1.66
CCDC47-202ENST00000403162 WDR63Q8IWG1 891 aa25.41■■□□□ 1.66
CCDC47-202ENST00000403162 XRN1Q8IZH2 1706 aaKnown RBP25.4■■□□□ 1.66
CCDC47-202ENST00000403162 PMFBP1Q8TBY8 1022 aa25.39■■□□□ 1.66
CCDC47-202ENST00000403162 TULP4Q9NRJ4 1543 aa25.39■■□□□ 1.66
CCDC47-202ENST00000403162 PTCH1Q13635 1447 aa25.39■■□□□ 1.66
CCDC47-202ENST00000403162 FRAT2O75474 233 aaPredicted RBP25.39■■□□□ 1.65
CCDC47-202ENST00000403162 CHD2O14647 1828 aaKnown RBP25.38■■□□□ 1.65
CCDC47-202ENST00000403162 CCDC27Q2M243 656 aa25.38■■□□□ 1.65
CCDC47-202ENST00000403162 NCBP3Q53F19 620 aaKnown RBP25.38■■□□□ 1.65
CCDC47-202ENST00000403162 TCP11L2Q8N4U5 519 aa25.37■■□□□ 1.65
CCDC47-202ENST00000403162 STRCQ7RTU9 1775 aa25.37■■□□□ 1.65
CCDC47-202ENST00000403162 SRPK2P78362 688 aaKnown RBP25.35■■□□□ 1.65
CCDC47-202ENST00000403162 CABP2Q9NPB3 220 aa25.35■■□□□ 1.65
CCDC47-202ENST00000403162 SLC12A5Q9H2X9 1139 aa25.34■■□□□ 1.65
CCDC47-202ENST00000403162 SEC24BO95487 1268 aa25.34■■□□□ 1.65
CCDC47-202ENST00000403162 CDK19Q9BWU1 502 aa25.34■■□□□ 1.65
CCDC47-202ENST00000403162 BRPF3Q9ULD4 1205 aa25.34■■□□□ 1.65
CCDC47-202ENST00000403162 BECN1Q14457 450 aa25.33■■□□□ 1.65
CCDC47-202ENST00000403162 RTN4Q9NQC3 1192 aaKnown RBP25.33■■□□□ 1.65
CCDC47-202ENST00000403162 RRP7AQ9Y3A4 280 aaKnown RBP25.32■■□□□ 1.64
CCDC47-202ENST00000403162 NEUROD2Q15784 382 aa25.31■■□□□ 1.64
CCDC47-202ENST00000403162 CFAP53Q96M91 514 aa25.31■■□□□ 1.64
CCDC47-202ENST00000403162 PUS7Q96PZ0 661 aaKnown RBP25.31■■□□□ 1.64
CCDC47-202ENST00000403162 ADGRB2O60241 1585 aa25.31■■□□□ 1.64
CCDC47-202ENST00000403162 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.3■■□□□ 1.64
CCDC47-202ENST00000403162 NSD2O96028 1365 aa25.3■■□□□ 1.64
CCDC47-202ENST00000403162 RLBP1P12271 317 aa25.3■■□□□ 1.64
CCDC47-202ENST00000403162 TNNT2P45379 298 aaPredicted RBP25.3■■□□□ 1.64
CCDC47-202ENST00000403162 PCDHB15Q9Y5E8 787 aa25.3■■□□□ 1.64
CCDC47-202ENST00000403162 WASLO00401 505 aaPredicted RBP25.29■■□□□ 1.64
CCDC47-202ENST00000403162 MTHFSP49914 203 aa25.29■■□□□ 1.64
CCDC47-202ENST00000403162 NWD1Q149M9 1564 aa25.28■■□□□ 1.64
CCDC47-202ENST00000403162 MYH16Q9H6N6 1097 aa25.27■■□□□ 1.64
CCDC47-202ENST00000403162 RBM33Q96EV2 1170 aaKnown RBP25.27■■□□□ 1.64
CCDC47-202ENST00000403162 ATAD2Q6PL18 1390 aa25.25■■□□□ 1.63
CCDC47-202ENST00000403162 ANKRD36BQ8N2N9 1353 aa25.25■■□□□ 1.63
CCDC47-202ENST00000403162 RWDD1Q9H446 243 aaPredicted RBP25.25■■□□□ 1.63
CCDC47-202ENST00000403162 PDZRN3Q9UPQ7 1066 aa25.25■■□□□ 1.63
CCDC47-202ENST00000403162 TBC1D32Q96NH3 1257 aa25.24■■□□□ 1.63
CCDC47-202ENST00000403162 UPF2Q9HAU5 1272 aaKnown RBP25.24■■□□□ 1.63
CCDC47-202ENST00000403162 TNNQ9UQP3 1299 aa25.24■■□□□ 1.63
CCDC47-202ENST00000403162 PROSER2Q86WR7 435 aaPredicted RBP25.23■■□□□ 1.63
CCDC47-202ENST00000403162 CT47B1P0C2W7 299 aaPredicted RBP25.22■■□□□ 1.63
CCDC47-202ENST00000403162 MVPQ14764 893 aaKnown RBP25.21■■□□□ 1.63
CCDC47-202ENST00000403162 BCL2L13Q9BXK5 485 aa25.21■■□□□ 1.63
CCDC47-202ENST00000403162 C14orf37Q86TY3 774 aa25.2■■□□□ 1.62
CCDC47-202ENST00000403162 ANTXR1Q9H6X2 564 aa25.2■■□□□ 1.62
CCDC47-202ENST00000403162 ANO8Q9HCE9 1232 aaPredicted RBP25.2■■□□□ 1.62
CCDC47-202ENST00000403162 NUDT16Q96DE0 195 aaKnown RBP25.19■■□□□ 1.62
CCDC47-202ENST00000403162 STRCP1A6NGW2 1772 aa25.18■■□□□ 1.62
CCDC47-202ENST00000403162 NUTM2FA1L443 756 aa25.18■■□□□ 1.62
CCDC47-202ENST00000403162 ZKSCAN2Q63HK3 967 aa25.18■■□□□ 1.62
CCDC47-202ENST00000403162 CABP1Q9NZU7 370 aa25.17■■□□□ 1.62
CCDC47-202ENST00000403162 U2AF1L5P0DN76 240 aaPredicted RBP25.17■■□□□ 1.62
CCDC47-202ENST00000403162 U2AF1Q01081 240 aaKnown RBP eCLIP25.17■■□□□ 1.62
CCDC47-202ENST00000403162 NALCNQ8IZF0 1738 aa25.17■■□□□ 1.62
CCDC47-202ENST00000403162 ADGRL3Q9HAR2 1447 aa25.16■■□□□ 1.62
CCDC47-202ENST00000403162 ZNF335Q9H4Z2 1342 aaPredicted RBP25.15■■□□□ 1.62
CCDC47-202ENST00000403162 PRR36Q9H6K5 1346 aa25.15■■□□□ 1.62
CCDC47-202ENST00000403162 AEBP2Q6ZN18 517 aaPredicted RBP25.15■■□□□ 1.62
CCDC47-202ENST00000403162 DZIP1LQ8IYY4 767 aaKnown RBP25.15■■□□□ 1.62
CCDC47-202ENST00000403162 SLKQ9H2G2 1235 aaPredicted RBP25.14■■□□□ 1.62
CCDC47-202ENST00000403162 CCDC61Q9Y6R9 512 aa25.14■■□□□ 1.62
CCDC47-202ENST00000403162 ATP7BP35670 1465 aa25.14■■□□□ 1.61
CCDC47-202ENST00000403162 PPIP5K1Q6PFW1 1433 aa25.13■■□□□ 1.61
CCDC47-202ENST00000403162 TBC1D2Q9BYX2 928 aa25.13■■□□□ 1.61
CCDC47-202ENST00000403162 FTSJ3Q8IY81 847 aaKnown RBP25.12■■□□□ 1.61
CCDC47-202ENST00000403162 TERF2IPQ9NYB0 399 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms