RNA–Protein interactions for RNA: ENST00000401979.6

FAM49B-201, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM49B, Length 2,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-201ENST00000401979 PPP2R1AP30153 589 aa21.11■□□□□ 0.97
FAM49B-201ENST00000401979 C1orf167Q5SNV9 1468 aa21.08■□□□□ 0.96
FAM49B-201ENST00000401979 NME9Q86XW9 330 aa21.07■□□□□ 0.96
FAM49B-201ENST00000401979 ORAI2Q96SN7 254 aa21.07■□□□□ 0.96
FAM49B-201ENST00000401979 TTC21BQ7Z4L5 1316 aa21.07■□□□□ 0.96
FAM49B-201ENST00000401979 ANKRD26Q9UPS8 1709 aa21.07■□□□□ 0.96
FAM49B-201ENST00000401979 FAM9BQ8IZU0 186 aa21.06■□□□□ 0.96
FAM49B-201ENST00000401979 MST1RQ04912 1400 aa21.06■□□□□ 0.96
FAM49B-201ENST00000401979 NRKQ7Z2Y5 1582 aa21.06■□□□□ 0.96
FAM49B-201ENST00000401979 PSME1Q06323 249 aa21.05■□□□□ 0.96
FAM49B-201ENST00000401979 COG3Q96JB2 828 aa21.05■□□□□ 0.96
FAM49B-201ENST00000401979 TTC21AQ8NDW8 1320 aa21.04■□□□□ 0.96
FAM49B-201ENST00000401979 PAK3O75914 559 aaPredicted RBP21.04■□□□□ 0.96
FAM49B-201ENST00000401979 FOXO3O43524 673 aa21.02■□□□□ 0.96
FAM49B-201ENST00000401979 KIF1AQ12756 1690 aa21.02■□□□□ 0.96
FAM49B-201ENST00000401979 SSH2Q76I76 1423 aa21.01■□□□□ 0.95
FAM49B-201ENST00000401979 ZRANB1Q9UGI0 708 aa21■□□□□ 0.95
FAM49B-201ENST00000401979 SLAIN2Q9P270 581 aa20.99■□□□□ 0.95
FAM49B-201ENST00000401979 PNISRQ8TF01 805 aaKnown RBP20.98■□□□□ 0.95
FAM49B-201ENST00000401979 MTHFSP49914 203 aa20.97■□□□□ 0.95
FAM49B-201ENST00000401979 XPCQ01831 940 aaPredicted RBP20.97■□□□□ 0.95
FAM49B-201ENST00000401979 ABTB2Q8N961 1025 aa20.97■□□□□ 0.95
FAM49B-201ENST00000401979 LTBP4Q8N2S1 1624 aa20.97■□□□□ 0.95
FAM49B-201ENST00000401979 CFAP53Q96M91 514 aa20.96■□□□□ 0.95
FAM49B-201ENST00000401979 NLRP6P59044 892 aa20.95■□□□□ 0.94
FAM49B-201ENST00000401979 SCAF1Q9H7N4 1312 aaKnown RBP20.95■□□□□ 0.94
FAM49B-201ENST00000401979 KRT28Q7Z3Y7 464 aa20.95■□□□□ 0.94
FAM49B-201ENST00000401979 PIK3C2AO00443 1686 aa20.94■□□□□ 0.94
FAM49B-201ENST00000401979 WDR43Q15061 677 aaKnown RBP eCLIP20.94■□□□□ 0.94
FAM49B-201ENST00000401979 NUTM2GQ5VZR2 741 aa20.94■□□□□ 0.94
FAM49B-201ENST00000401979 OVOS2A0A0J9YW53 1432 aa20.94■□□□□ 0.94
FAM49B-201ENST00000401979 OVOS2Q6IE36 1432 aa20.94■□□□□ 0.94
FAM49B-201ENST00000401979 NPHP3Q7Z494 1330 aa20.93■□□□□ 0.94
FAM49B-201ENST00000401979 PPM1GO15355 546 aaPredicted RBP20.93■□□□□ 0.94
FAM49B-201ENST00000401979 LMOD2Q6P5Q4 547 aa20.93■□□□□ 0.94
FAM49B-201ENST00000401979 BRINP3Q76B58 766 aa20.92■□□□□ 0.94
FAM49B-201ENST00000401979 SOX12O15370 315 aa20.92■□□□□ 0.94
FAM49B-201ENST00000401979 FBLN1P23142 703 aa20.92■□□□□ 0.94
FAM49B-201ENST00000401979 USP31Q70CQ4 1352 aa20.91■□□□□ 0.94
FAM49B-201ENST00000401979 DDX17Q92841 729 aaKnown RBP20.91■□□□□ 0.94
FAM49B-201ENST00000401979 MAP2P11137 1827 aaKnown RBP20.9■□□□□ 0.94
FAM49B-201ENST00000401979 HNRNPUQ00839 825 aaKnown RBP eCLIP20.9■□□□□ 0.94
FAM49B-201ENST00000401979 AATKQ6ZMQ8 1374 aa20.9■□□□□ 0.94
FAM49B-201ENST00000401979 POLKQ9UBT6 870 aa20.89■□□□□ 0.93
FAM49B-201ENST00000401979 RRS1Q15050 365 aaKnown RBP20.88■□□□□ 0.93
FAM49B-201ENST00000401979 CENPBP07199 599 aaPredicted RBP20.87■□□□□ 0.93
FAM49B-201ENST00000401979 EMILIN1Q9Y6C2 1016 aa20.87■□□□□ 0.93
FAM49B-201ENST00000401979 TRPM3Q9HCF6 1732 aaPredicted RBP20.87■□□□□ 0.93
FAM49B-201ENST00000401979 PLEKHG5O94827 1062 aa20.85■□□□□ 0.93
FAM49B-201ENST00000401979 ADAMTS8Q9UP79 889 aa20.85■□□□□ 0.93
FAM49B-201ENST00000401979 USP54Q70EL1 1684 aa20.84■□□□□ 0.93
FAM49B-201ENST00000401979 SBNO1A3KN83 1393 aa20.84■□□□□ 0.93
FAM49B-201ENST00000401979 NUDCQ9Y266 331 aa20.83■□□□□ 0.93
FAM49B-201ENST00000401979 PXDNQ92626 1479 aa20.83■□□□□ 0.92
FAM49B-201ENST00000401979 DIAPH1O60610 1272 aaKnown RBP20.82■□□□□ 0.92
FAM49B-201ENST00000401979 SMG6Q86US8 1419 aaKnown RBP20.82■□□□□ 0.92
FAM49B-201ENST00000401979 MARF1Q9Y4F3 1742 aaKnown RBP20.82■□□□□ 0.92
FAM49B-201ENST00000401979 CDK12Q9NYV4 1490 aaPredicted RBP20.82■□□□□ 0.92
FAM49B-201ENST00000401979 KCNH5Q8NCM2 988 aa20.82■□□□□ 0.92
FAM49B-201ENST00000401979 TNS3Q68CZ2 1445 aa20.81■□□□□ 0.92
FAM49B-201ENST00000401979 PNPLA6Q8IY17 1366 aa20.81■□□□□ 0.92
FAM49B-201ENST00000401979 SHPRHQ149N8 1683 aa20.81■□□□□ 0.92
FAM49B-201ENST00000401979 U2SURPO15042 1029 aaKnown RBP20.8■□□□□ 0.92
FAM49B-201ENST00000401979 ALS2Q96Q42 1657 aa20.8■□□□□ 0.92
FAM49B-201ENST00000401979 MAP3K19Q56UN5 1328 aa20.79■□□□□ 0.92
FAM49B-201ENST00000401979 COL3A1P02461 1466 aaPredicted RBP20.79■□□□□ 0.92
FAM49B-201ENST00000401979 TOM1O60784 492 aa20.79■□□□□ 0.92
FAM49B-201ENST00000401979 U2AF1L5P0DN76 240 aaPredicted RBP20.79■□□□□ 0.92
FAM49B-201ENST00000401979 AMPHP49418 695 aa20.79■□□□□ 0.92
FAM49B-201ENST00000401979 U2AF1Q01081 240 aaKnown RBP eCLIP20.79■□□□□ 0.921e-8■■■□□ 18.4
FAM49B-201ENST00000401979 SPATA31A3Q5VYP0 1347 aa20.79■□□□□ 0.92
FAM49B-201ENST00000401979 ARHGEF10O15013 1369 aa20.78■□□□□ 0.92
FAM49B-201ENST00000401979 ROBO1Q9Y6N7 1651 aa20.78■□□□□ 0.92
FAM49B-201ENST00000401979 INSRP06213 1382 aa20.78■□□□□ 0.92
FAM49B-201ENST00000401979 SOS2Q07890 1332 aaPredicted RBP20.78■□□□□ 0.92
FAM49B-201ENST00000401979 SENP3-EIF4A1A0A087X0R7 540 aa20.77■□□□□ 0.92
FAM49B-201ENST00000401979 ZBTB7CA1YPR0 619 aa20.77■□□□□ 0.91
FAM49B-201ENST00000401979 GCP02774 474 aa20.77■□□□□ 0.91
FAM49B-201ENST00000401979 BLMP54132 1417 aaPredicted RBP20.77■□□□□ 0.91
FAM49B-201ENST00000401979 NHSL1Q5SYE7 1610 aa20.76■□□□□ 0.91
FAM49B-201ENST00000401979 USP19O94966 1318 aa20.76■□□□□ 0.91
FAM49B-201ENST00000401979 FLT4P35916 1363 aa20.76■□□□□ 0.91
FAM49B-201ENST00000401979 CCDC146Q8IYE0 955 aa20.75■□□□□ 0.91
FAM49B-201ENST00000401979 PEAK1Q9H792 1746 aa20.74■□□□□ 0.91
FAM49B-201ENST00000401979 SLIT3O75094 1523 aa20.74■□□□□ 0.91
FAM49B-201ENST00000401979 NFAT5O94916 1531 aa20.74■□□□□ 0.91
FAM49B-201ENST00000401979 PIP4K2BP78356 416 aa20.74■□□□□ 0.91
FAM49B-201ENST00000401979 UBAP1LF5GYI3 381 aa20.73■□□□□ 0.91
FAM49B-201ENST00000401979 HSP90AB2PQ58FF8 381 aa20.73■□□□□ 0.91
FAM49B-201ENST00000401979 LTN1O94822 1766 aa20.73■□□□□ 0.91
FAM49B-201ENST00000401979 ZBED9Q6R2W3 1325 aa20.73■□□□□ 0.91
FAM49B-201ENST00000401979 KIF24Q5T7B8 1368 aa20.73■□□□□ 0.91
FAM49B-201ENST00000401979 IL13P35225 146 aa20.71■□□□□ 0.91
FAM49B-201ENST00000401979 SALL2Q9Y467 1007 aaPredicted RBP20.71■□□□□ 0.91
FAM49B-201ENST00000401979 HOXC9P31274 260 aa20.71■□□□□ 0.91
FAM49B-201ENST00000401979 CABLES1Q8TDN4 633 aa20.71■□□□□ 0.91
FAM49B-201ENST00000401979 MED1Q15648 1581 aaPredicted RBP20.7■□□□□ 0.9
FAM49B-201ENST00000401979 RTL1A6NKG5 1358 aa20.7■□□□□ 0.9
FAM49B-201ENST00000401979 HAP1P54257 671 aaPredicted RBP20.7■□□□□ 0.9
FAM49B-201ENST00000401979 EIF4A2Q14240 407 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms