RNA–Protein interactions for RNA: ENST00000399959.6

DDX3X-201, Transcript of DEAD-box helicase 3 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX3X, Length 5,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-201ENST00000399959 TBC1D2Q9BYX2 928 aa16.23■□□□□ 0.19
DDX3X-201ENST00000399959 PRM3Q9NNZ6 103 aa16.23■□□□□ 0.19
DDX3X-201ENST00000399959 RSPH4AQ5TD94 716 aa16.22■□□□□ 0.19
DDX3X-201ENST00000399959 FAM193AP78312 1265 aa16.22■□□□□ 0.19
DDX3X-201ENST00000399959 TNPO1Q92973 898 aaKnown RBP16.22■□□□□ 0.19
DDX3X-201ENST00000399959 GTPBP4Q9BZE4 634 aaKnown RBP16.22■□□□□ 0.19
DDX3X-201ENST00000399959 TCP11L2Q8N4U5 519 aa16.22■□□□□ 0.19
DDX3X-201ENST00000399959 POLR3GO15318 223 aaPredicted RBP16.21■□□□□ 0.19
DDX3X-201ENST00000399959 PPP2R1AP30153 589 aa16.21■□□□□ 0.19
DDX3X-201ENST00000399959 CEBPZQ03701 1054 aaKnown RBP16.21■□□□□ 0.19
DDX3X-201ENST00000399959 SHTN1A0MZ66 631 aa16.21■□□□□ 0.19
DDX3X-201ENST00000399959 XRCC6P12956 609 aaKnown RBP eCLIP16.21■□□□□ 0.19
DDX3X-201ENST00000399959 ZRSR2Q15696 482 aaKnown RBP16.21■□□□□ 0.19
DDX3X-201ENST00000399959 PPFIBP1Q86W92 1011 aa16.21■□□□□ 0.19
DDX3X-201ENST00000399959 GBP3Q9H0R5 595 aa16.21■□□□□ 0.19
DDX3X-201ENST00000399959 TNNT1P13805 278 aa16.2■□□□□ 0.18
DDX3X-201ENST00000399959 STK38Q15208 465 aa16.2■□□□□ 0.18
DDX3X-201ENST00000399959 CHD1LQ86WJ1 897 aa16.2■□□□□ 0.18
DDX3X-201ENST00000399959 CEP57L1Q8IYX8 460 aa16.2■□□□□ 0.18
DDX3X-201ENST00000399959 MVPQ14764 893 aaKnown RBP16.2■□□□□ 0.18
DDX3X-201ENST00000399959 BRPF1P55201 1214 aaPredicted RBP16.2■□□□□ 0.18
DDX3X-201ENST00000399959 MAP3K11Q16584 847 aa16.2■□□□□ 0.18
DDX3X-201ENST00000399959 C1orf115Q9H7X2 142 aa16.2■□□□□ 0.18
DDX3X-201ENST00000399959 INCENPQ9NQS7 918 aa16.2■□□□□ 0.18
DDX3X-201ENST00000399959 OFD1O75665 1012 aa16.19■□□□□ 0.18
DDX3X-201ENST00000399959 FAM107BQ9H098 131 aa16.19■□□□□ 0.18
DDX3X-201ENST00000399959 WASHC2CQ9Y4E1 1318 aa16.19■□□□□ 0.18
DDX3X-201ENST00000399959 COG3Q96JB2 828 aa16.19■□□□□ 0.18
DDX3X-201ENST00000399959 NEXNQ0ZGT2 675 aa16.19■□□□□ 0.18
DDX3X-201ENST00000399959 SKAP1Q86WV1 359 aa16.19■□□□□ 0.18
DDX3X-201ENST00000399959 IRX3P78415 501 aaPredicted RBP16.19■□□□□ 0.18
DDX3X-201ENST00000399959 EXOSC9Q06265 439 aaKnown RBP16.19■□□□□ 0.18
DDX3X-201ENST00000399959 CCDC183Q5T5S1 534 aa16.18■□□□□ 0.18
DDX3X-201ENST00000399959 CSB-PGBD3P0DP91 1061 aa16.18■□□□□ 0.18
DDX3X-201ENST00000399959 RALYLQ86SE5 291 aaKnown RBP16.18■□□□□ 0.18
DDX3X-201ENST00000399959 NOB1Q9ULX3 412 aaKnown RBP16.18■□□□□ 0.18
DDX3X-201ENST00000399959 KIF3BO15066 747 aa16.18■□□□□ 0.18
DDX3X-201ENST00000399959 EIF2S2P20042 333 aaKnown RBP16.18■□□□□ 0.18
DDX3X-201ENST00000399959 GTF2A1P52655 376 aaPredicted RBP16.18■□□□□ 0.18
DDX3X-201ENST00000399959 IPO4Q8TEX9 1081 aaKnown RBP16.18■□□□□ 0.18
DDX3X-201ENST00000399959 DYDC1Q8WWB3 177 aa16.18■□□□□ 0.18
DDX3X-201ENST00000399959 NECTIN2Q92692 538 aa16.18■□□□□ 0.18
DDX3X-201ENST00000399959 SPATA32Q96LK8 384 aa16.18■□□□□ 0.18
DDX3X-201ENST00000399959 DHX37Q8IY37 1157 aaKnown RBP16.18■□□□□ 0.18
DDX3X-201ENST00000399959 USP25Q9UHP3 1055 aa16.18■□□□□ 0.18
DDX3X-201ENST00000399959 SSFA2P28290 1259 aa16.17■□□□□ 0.18
DDX3X-201ENST00000399959 PIP4K2AP48426 406 aaPredicted RBP16.17■□□□□ 0.18
DDX3X-201ENST00000399959 EFCAB2Q5VUJ9 269 aa16.17■□□□□ 0.18
DDX3X-201ENST00000399959 CYP46A1Q9Y6A2 500 aa16.17■□□□□ 0.18
DDX3X-201ENST00000399959 CCDC181Q5TID7 509 aa16.17■□□□□ 0.18
DDX3X-201ENST00000399959 NUTM2DQ5VT03 806 aaPredicted RBP16.17■□□□□ 0.18
DDX3X-201ENST00000399959 LARP1BQ659C4 914 aaKnown RBP16.17■□□□□ 0.18
DDX3X-201ENST00000399959 IQCEQ6IPM2 695 aa16.17■□□□□ 0.18
DDX3X-201ENST00000399959 FGD6Q6ZV73 1430 aa16.17■□□□□ 0.18
DDX3X-201ENST00000399959 DDX11Q96FC9 970 aa16.17■□□□□ 0.18
DDX3X-201ENST00000399959 LTV1Q96GA3 475 aaPredicted RBP16.17■□□□□ 0.18
DDX3X-201ENST00000399959 C16orf45Q96MC5 204 aaPredicted RBP16.17■□□□□ 0.18
DDX3X-201ENST00000399959 UPF3BQ9BZI7 483 aaKnown RBP16.17■□□□□ 0.18
DDX3X-201ENST00000399959 ERLIN2O94905 339 aa16.17■□□□□ 0.18
DDX3X-201ENST00000399959 CCDC94Q9BW85 323 aaPredicted RBP16.17■□□□□ 0.18
DDX3X-201ENST00000399959 KRT222Q8N1A0 295 aa16.16■□□□□ 0.18
DDX3X-201ENST00000399959 ERICH2A1L162 156 aa16.16■□□□□ 0.18
DDX3X-201ENST00000399959 ME1P48163 572 aa16.16■□□□□ 0.18
DDX3X-201ENST00000399959 ZNHIT6Q9NWK9 470 aaKnown RBP16.16■□□□□ 0.18
DDX3X-201ENST00000399959 BMS1Q14692 1282 aaKnown RBP16.16■□□□□ 0.18
DDX3X-201ENST00000399959 DACH1Q9UI36 760 aa16.16■□□□□ 0.18
DDX3X-201ENST00000399959 HSP90AB2PQ58FF8 381 aa16.16■□□□□ 0.18
DDX3X-201ENST00000399959 CRACR2AQ9BSW2 395 aa16.16■□□□□ 0.18
DDX3X-201ENST00000399959 CARMIL2Q6F5E8 1435 aa16.16■□□□□ 0.18
DDX3X-201ENST00000399959 UBTFL1P0CB47 393 aaPredicted RBP16.15■□□□□ 0.18
DDX3X-201ENST00000399959 SMAP1Q8IYB5 467 aaPredicted RBP16.15■□□□□ 0.18
DDX3X-201ENST00000399959 FSD1Q9BTV5 496 aa16.15■□□□□ 0.18
DDX3X-201ENST00000399959 TOP2AP11388 1531 aaKnown RBP16.15■□□□□ 0.18
DDX3X-201ENST00000399959 PANK2Q9BZ23 570 aa16.15■□□□□ 0.18
DDX3X-201ENST00000399959 ANKRD1Q15327 319 aa16.14■□□□□ 0.18
DDX3X-201ENST00000399959 ODF2Q5BJF6 829 aa16.14■□□□□ 0.18
DDX3X-201ENST00000399959 MAGEC2Q9UBF1 373 aaPredicted RBP16.14■□□□□ 0.18
DDX3X-201ENST00000399959 WDR97A6NE52 1622 aa16.14■□□□□ 0.17
DDX3X-201ENST00000399959 SFPQP23246 707 aaKnown RBP eCLIP16.14■□□□□ 0.17
DDX3X-201ENST00000399959 JMYQ8N9B5 988 aa16.14■□□□□ 0.17
DDX3X-201ENST00000399959 RRBP1Q9P2E9 1410 aaKnown RBP16.14■□□□□ 0.17
DDX3X-201ENST00000399959 CT47A1Q5JQC4 288 aaPredicted RBP16.14■□□□□ 0.17
DDX3X-201ENST00000399959 HIP1O00291 1037 aa16.14■□□□□ 0.17
DDX3X-201ENST00000399959 TXLNBQ8N3L3 684 aa16.14■□□□□ 0.17
DDX3X-201ENST00000399959 URI1O94763 535 aaPredicted RBP16.13■□□□□ 0.17
DDX3X-201ENST00000399959 KIF21BO75037 1637 aa16.13■□□□□ 0.17
DDX3X-201ENST00000399959 SMTNL1A8MU46 457 aa16.13■□□□□ 0.17
DDX3X-201ENST00000399959 ZSCAN12O43309 604 aa16.13■□□□□ 0.17
DDX3X-201ENST00000399959 GNAI3P08754 354 aa16.13■□□□□ 0.17
DDX3X-201ENST00000399959 EPS15P42566 896 aa16.13■□□□□ 0.17
DDX3X-201ENST00000399959 IBSPP21815 317 aaPredicted RBP16.13■□□□□ 0.17
DDX3X-201ENST00000399959 KLHL40Q2TBA0 621 aa16.13■□□□□ 0.17
DDX3X-201ENST00000399959 ATF7IPQ6VMQ6 1270 aa16.13■□□□□ 0.17
DDX3X-201ENST00000399959 CLIP2Q9UDT6 1046 aa16.13■□□□□ 0.17
DDX3X-201ENST00000399959 WWC1Q8IX03 1113 aa16.12■□□□□ 0.17
DDX3X-201ENST00000399959 TRIM34Q9BYJ4 488 aa16.12■□□□□ 0.17
DDX3X-201ENST00000399959 BRMS1Q9HCU9 246 aa16.12■□□□□ 0.17
DDX3X-201ENST00000399959 ADCY5O95622 1261 aa16.12■□□□□ 0.17
DDX3X-201ENST00000399959 TEFQ10587 303 aa16.12■□□□□ 0.17
DDX3X-201ENST00000399959 CLASRPQ8N2M8 674 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms