RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 SLC26A8Q96RN1 970 aa3.95□□□□□ -1.78
KNL1-202ENST00000399668 ATP6V1DQ9Y5K8 247 aa3.95□□□□□ -1.78
KNL1-202ENST00000399668 CDC42BPAQ5VT25 1732 aa3.95□□□□□ -1.78
KNL1-202ENST00000399668 FYB1O15117 783 aa3.95□□□□□ -1.78
KNL1-202ENST00000399668 NFKBIBQ15653 356 aa3.95□□□□□ -1.78
KNL1-202ENST00000399668 NINQ8N4C6 2090 aa3.95□□□□□ -1.78
KNL1-202ENST00000399668 CCDC27Q2M243 656 aa3.95□□□□□ -1.78
KNL1-202ENST00000399668 SYNE3Q6ZMZ3 975 aa3.95□□□□□ -1.78
KNL1-202ENST00000399668 API5Q9BZZ5 524 aaKnown RBP3.95□□□□□ -1.78
KNL1-202ENST00000399668 PEG3Q9GZU2 1588 aa3.95□□□□□ -1.78
KNL1-202ENST00000399668 STRN4Q9NRL3 753 aa3.95□□□□□ -1.78
KNL1-202ENST00000399668 NLRP2Q9NX02 1062 aa3.95□□□□□ -1.78
KNL1-202ENST00000399668 CHD4Q14839 1912 aa3.95□□□□□ -1.78
KNL1-202ENST00000399668 MAGI1Q96QZ7 1491 aaPredicted RBP3.95□□□□□ -1.78
KNL1-202ENST00000399668 MAP4K4O95819 1239 aaPredicted RBP3.95□□□□□ -1.78
KNL1-202ENST00000399668 GCC2Q8IWJ2 1684 aa3.95□□□□□ -1.78
KNL1-202ENST00000399668 EXOSC9Q06265 439 aaKnown RBP3.95□□□□□ -1.78
KNL1-202ENST00000399668 BICD2Q8TD16 824 aa3.95□□□□□ -1.78
KNL1-202ENST00000399668 SMC3Q9UQE7 1217 aa3.95□□□□□ -1.78
KNL1-202ENST00000399668 TRIM29Q14134 588 aa3.95□□□□□ -1.78
KNL1-202ENST00000399668 TSR1Q2NL82 804 aaKnown RBP3.95□□□□□ -1.78
KNL1-202ENST00000399668 SAMD1Q6SPF0 538 aaPredicted RBP3.95□□□□□ -1.78
KNL1-202ENST00000399668 NFXL1Q6ZNB6 911 aa3.95□□□□□ -1.78
KNL1-202ENST00000399668 CPLX1O14810 134 aa3.94□□□□□ -1.78
KNL1-202ENST00000399668 SURF6O75683 361 aaKnown RBP3.94□□□□□ -1.78
KNL1-202ENST00000399668 SKOR2Q2VWA4 1001 aaPredicted RBP3.94□□□□□ -1.78
KNL1-202ENST00000399668 MEX3CQ5U5Q3 659 aaKnown RBP3.94□□□□□ -1.78
KNL1-202ENST00000399668 RNF20Q5VTR2 975 aa3.94□□□□□ -1.78
KNL1-202ENST00000399668 CCDC30Q5VVM6 783 aa3.94□□□□□ -1.78
KNL1-202ENST00000399668 MIS18AQ9NYP9 233 aa3.94□□□□□ -1.78
KNL1-202ENST00000399668 WAPLQ7Z5K2 1190 aa3.94□□□□□ -1.78
KNL1-202ENST00000399668 CHMP5Q9NZZ3 219 aa3.94□□□□□ -1.78
KNL1-202ENST00000399668 MTMR7Q9Y216 660 aa3.94□□□□□ -1.78
KNL1-202ENST00000399668 ABCA10Q8WWZ4 1543 aa3.94□□□□□ -1.78
KNL1-202ENST00000399668 XPCQ01831 940 aaPredicted RBP3.94□□□□□ -1.78
KNL1-202ENST00000399668 HSP90AA2PQ14568 343 aaPredicted RBP3.94□□□□□ -1.78
KNL1-202ENST00000399668 WWC1Q8IX03 1113 aa3.94□□□□□ -1.78
KNL1-202ENST00000399668 CNTROBQ8N137 903 aa3.94□□□□□ -1.78
KNL1-202ENST00000399668 SIL1Q9H173 461 aa3.94□□□□□ -1.78
KNL1-202ENST00000399668 SLC4A2P04920 1241 aa3.94□□□□□ -1.78
KNL1-202ENST00000399668 CPLX2Q6PUV4 134 aaKnown RBP3.94□□□□□ -1.78
KNL1-202ENST00000399668 STK11IPQ8N1F8 1099 aa3.94□□□□□ -1.78
KNL1-202ENST00000399668 DNAJC5BQ9UF47 199 aa3.94□□□□□ -1.78
KNL1-202ENST00000399668 NSD3Q9BZ95 1437 aa3.94□□□□□ -1.78
KNL1-202ENST00000399668 CCDC141Q6ZP82 1450 aa3.94□□□□□ -1.78
KNL1-202ENST00000399668 TWISTNBQ3B726 338 aaPredicted RBP3.94□□□□□ -1.78
KNL1-202ENST00000399668 CLASRPQ8N2M8 674 aaKnown RBP3.94□□□□□ -1.78
KNL1-202ENST00000399668 PLEKHH2Q8IVE3 1493 aa3.94□□□□□ -1.78
KNL1-202ENST00000399668 WASHC4Q2M389 1173 aa3.94□□□□□ -1.78
KNL1-202ENST00000399668 RBM33Q96EV2 1170 aaKnown RBP3.94□□□□□ -1.78
KNL1-202ENST00000399668 NOL10Q9BSC4 688 aaKnown RBP3.94□□□□□ -1.78
KNL1-202ENST00000399668 ERC2O15083 957 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 GNAI2P04899 355 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 DDX54Q8TDD1 881 aaKnown RBP3.93□□□□□ -1.78
KNL1-202ENST00000399668 STAC3Q96MF2 364 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 MYH2Q9UKX2 1941 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 A0A0U1RQG5 324 aaPredicted RBP3.93□□□□□ -1.78
KNL1-202ENST00000399668 NEK4P51957 841 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 DCTN1Q14203 1278 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 URB2Q14146 1524 aaKnown RBP3.93□□□□□ -1.78
KNL1-202ENST00000399668 ERICH2A1L162 156 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 CEBPZQ03701 1054 aaKnown RBP3.93□□□□□ -1.78
KNL1-202ENST00000399668 HDGFL1Q5TGJ6 251 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 SASS6Q6UVJ0 657 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 SKAP1Q86WV1 359 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 TRIM34Q9BYJ4 488 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 PDZRN3Q9UPQ7 1066 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 NINLQ9Y2I6 1382 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 CAVIN1Q6NZI2 390 aaKnown RBP3.93□□□□□ -1.78
KNL1-202ENST00000399668 RNF214Q8ND24 703 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 NASPP49321 788 aaPredicted RBP3.93□□□□□ -1.78
KNL1-202ENST00000399668 NUCB2P80303 420 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 ATF7IPQ6VMQ6 1270 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 RALYLQ86SE5 291 aaKnown RBP3.93□□□□□ -1.78
KNL1-202ENST00000399668 SMG6Q86US8 1419 aaKnown RBP3.93□□□□□ -1.78
KNL1-202ENST00000399668 DHX16O60231 1041 aaKnown RBP3.93□□□□□ -1.78
KNL1-202ENST00000399668 TRAK2O60296 914 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 TMPOP42166 694 aaKnown RBP3.93□□□□□ -1.78
KNL1-202ENST00000399668 AMOTL1Q8IY63 956 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 CCDC88CQ9P219 2028 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 GPRASP1Q5JY77 1395 aa3.93□□□□□ -1.78
KNL1-202ENST00000399668 GOLGA6L1Q8N7Z2 621 aa3.92□□□□□ -1.78
KNL1-202ENST00000399668 PCMTD1Q96MG8 357 aaPredicted RBP3.92□□□□□ -1.78
KNL1-202ENST00000399668 THUMPD2Q9BTF0 503 aaKnown RBP3.92□□□□□ -1.78
KNL1-202ENST00000399668 ZNF608Q9ULD9 1512 aaPredicted RBP3.92□□□□□ -1.78
KNL1-202ENST00000399668 RTEL1-TNFRSF6BF6WH68 1400 aa3.92□□□□□ -1.78
KNL1-202ENST00000399668 GRIN2AQ12879 1464 aa3.92□□□□□ -1.78
KNL1-202ENST00000399668 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.92□□□□□ -1.78
KNL1-202ENST00000399668 TPM3P06753 285 aa3.92□□□□□ -1.78
KNL1-202ENST00000399668 RRP12Q5JTH9 1297 aaKnown RBP3.92□□□□□ -1.78
KNL1-202ENST00000399668 KIF6Q6ZMV9 814 aa3.92□□□□□ -1.78
KNL1-202ENST00000399668 HOMER1Q86YM7 354 aa3.92□□□□□ -1.78
KNL1-202ENST00000399668 GAS2L2Q8NHY3 880 aa3.92□□□□□ -1.78
KNL1-202ENST00000399668 BTBD11A6QL63 1104 aa3.92□□□□□ -1.78
KNL1-202ENST00000399668 PDE3AQ14432 1141 aa3.92□□□□□ -1.78
KNL1-202ENST00000399668 DNAJC2Q99543 621 aaKnown RBP3.92□□□□□ -1.78
KNL1-202ENST00000399668 SLC52A1Q9NWF4 448 aa3.92□□□□□ -1.78
KNL1-202ENST00000399668 TCEAL9Q9UHQ7 104 aa3.92□□□□□ -1.78
KNL1-202ENST00000399668 MYH1P12882 1939 aa3.92□□□□□ -1.78
KNL1-202ENST00000399668 MYH4Q9Y623 1939 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms