RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 PDE4AP27815 886 aa13.24□□□□□ -0.29
CACNA1C-215ENST00000399637 NAT10Q9H0A0 1025 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-215ENST00000399637 COG6Q9Y2V7 657 aa13.23□□□□□ -0.29
CACNA1C-215ENST00000399637 ANKLE2Q86XL3 938 aa13.23□□□□□ -0.29
CACNA1C-215ENST00000399637 RIPK4P57078 832 aa13.23□□□□□ -0.29
CACNA1C-215ENST00000399637 DCTN1Q14203 1278 aa13.23□□□□□ -0.29
CACNA1C-215ENST00000399637 GSE1Q14687 1217 aa13.23□□□□□ -0.29
CACNA1C-215ENST00000399637 PDILTQ8N807 584 aa13.23□□□□□ -0.29
CACNA1C-215ENST00000399637 ZPR1O75312 459 aa13.22□□□□□ -0.29
CACNA1C-215ENST00000399637 XPCQ01831 940 aaPredicted RBP13.22□□□□□ -0.29
CACNA1C-215ENST00000399637 ECM2O94769 699 aaPredicted RBP13.22□□□□□ -0.29
CACNA1C-215ENST00000399637 THEMISQ8N1K5 641 aaPredicted RBP13.22□□□□□ -0.29
CACNA1C-215ENST00000399637 DRC1Q96MC2 740 aa13.22□□□□□ -0.29
CACNA1C-215ENST00000399637 RUSC2Q8N2Y8 1516 aa13.22□□□□□ -0.29
CACNA1C-215ENST00000399637 RFX1P22670 979 aa13.22□□□□□ -0.29
CACNA1C-215ENST00000399637 IFT57Q9NWB7 429 aa13.22□□□□□ -0.29
CACNA1C-215ENST00000399637 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.22□□□□□ -0.29
CACNA1C-215ENST00000399637 SYCP1Q15431 976 aa13.22□□□□□ -0.29
CACNA1C-215ENST00000399637 TTC39AQ5SRH9 613 aa13.21□□□□□ -0.29
CACNA1C-215ENST00000399637 TTLL5Q6EMB2 1281 aa13.21□□□□□ -0.29
CACNA1C-215ENST00000399637 DZIP1LQ8IYY4 767 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-215ENST00000399637 HSP90B2PQ58FF3 399 aa13.21□□□□□ -0.3
CACNA1C-215ENST00000399637 HMOX1P09601 288 aa13.2□□□□□ -0.3
CACNA1C-215ENST00000399637 PRKRIP1Q9H875 184 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-215ENST00000399637 PDCL3Q9H2J4 239 aa13.2□□□□□ -0.3
CACNA1C-215ENST00000399637 EXOC6Q8TAG9 804 aa13.2□□□□□ -0.3
CACNA1C-215ENST00000399637 PLEKHO1Q53GL0 409 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-215ENST00000399637 ERCC4Q92889 916 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-215ENST00000399637 CNTLNQ9NXG0 1405 aa13.2□□□□□ -0.3
CACNA1C-215ENST00000399637 ST20-MTHFSA0A0A6YYL1 179 aa13.2□□□□□ -0.3
CACNA1C-215ENST00000399637 PSMA5P28066 241 aa13.2□□□□□ -0.3
CACNA1C-215ENST00000399637 NUCB2P80303 420 aa13.2□□□□□ -0.3
CACNA1C-215ENST00000399637 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-215ENST00000399637 BEGAINQ9BUH8 593 aa13.2□□□□□ -0.3
CACNA1C-215ENST00000399637 ZHX3Q9H4I2 956 aa13.19□□□□□ -0.3
CACNA1C-215ENST00000399637 UBAP1LF5GYI3 381 aa13.19□□□□□ -0.3
CACNA1C-215ENST00000399637 TRIM21P19474 475 aaKnown RBP13.19□□□□□ -0.3
CACNA1C-215ENST00000399637 ZNF526Q8TF50 670 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-215ENST00000399637 MAGEC2Q9UBF1 373 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-215ENST00000399637 CHMP5Q9NZZ3 219 aa13.19□□□□□ -0.3
CACNA1C-215ENST00000399637 SART3Q15020 963 aaKnown RBP13.19□□□□□ -0.3
CACNA1C-215ENST00000399637 BIN2Q9UBW5 565 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-215ENST00000399637 CCDC191Q8NCU4 936 aa13.19□□□□□ -0.3
CACNA1C-215ENST00000399637 MPHOSPH8Q99549 860 aa13.19□□□□□ -0.3
CACNA1C-215ENST00000399637 DNAJC2Q99543 621 aaKnown RBP13.18□□□□□ -0.3
CACNA1C-215ENST00000399637 ZNF76P36508 570 aa13.18□□□□□ -0.3
CACNA1C-215ENST00000399637 FHOD3Q2V2M9 1422 aa13.18□□□□□ -0.3
CACNA1C-215ENST00000399637 CNTROBQ8N137 903 aa13.18□□□□□ -0.3
CACNA1C-215ENST00000399637 PUS7Q96PZ0 661 aaKnown RBP13.17□□□□□ -0.3
CACNA1C-215ENST00000399637 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.17□□□□□ -0.3
CACNA1C-215ENST00000399637 MAP3K1Q13233 1512 aa13.17□□□□□ -0.3
CACNA1C-215ENST00000399637 SMARCE1Q969G3 411 aa13.17□□□□□ -0.3
CACNA1C-215ENST00000399637 WWC3Q9ULE0 1092 aa13.17□□□□□ -0.3
CACNA1C-215ENST00000399637 GNAI1P63096 354 aa13.17□□□□□ -0.3
CACNA1C-215ENST00000399637 TTC16Q8NEE8 873 aa13.17□□□□□ -0.3
CACNA1C-215ENST00000399637 ZRSR2Q15696 482 aaKnown RBP13.17□□□□□ -0.3
CACNA1C-215ENST00000399637 RUNDC1Q96C34 613 aa13.17□□□□□ -0.3
CACNA1C-215ENST00000399637 SPG7Q9UQ90 795 aa13.16□□□□□ -0.3
CACNA1C-215ENST00000399637 APAF1O14727 1248 aa13.16□□□□□ -0.3
CACNA1C-215ENST00000399637 UBTFL1P0CB47 393 aaPredicted RBP13.15□□□□□ -0.3
CACNA1C-215ENST00000399637 LETM1O95202 739 aaPredicted RBP13.15□□□□□ -0.3
CACNA1C-215ENST00000399637 TXLNAP40222 546 aa13.15□□□□□ -0.3
CACNA1C-215ENST00000399637 FAM13BQ9NYF5 915 aa13.15□□□□□ -0.3
CACNA1C-215ENST00000399637 CCDC39Q9UFE4 941 aa13.15□□□□□ -0.3
CACNA1C-215ENST00000399637 MIA2Q96PC5 1412 aa13.15□□□□□ -0.3
CACNA1C-215ENST00000399637 FILIP1LQ4L180 1135 aa13.15□□□□□ -0.3
CACNA1C-215ENST00000399637 ZNF622Q969S3 477 aaKnown RBP eCLIP13.15□□□□□ -0.3
CACNA1C-215ENST00000399637 CUX1P39880 1505 aa13.15□□□□□ -0.3
CACNA1C-215ENST00000399637 CRACR2BQ8N4Y2 399 aaPredicted RBP13.14□□□□□ -0.31
CACNA1C-215ENST00000399637 DMRT2Q9Y5R5 561 aa13.14□□□□□ -0.31
CACNA1C-215ENST00000399637 POGZQ7Z3K3 1410 aa13.14□□□□□ -0.31
CACNA1C-215ENST00000399637 FSD1Q9BTV5 496 aa13.14□□□□□ -0.31
CACNA1C-215ENST00000399637 USP47Q96K76 1375 aa13.14□□□□□ -0.31
CACNA1C-215ENST00000399637 ATP2B1P20020 1258 aa13.14□□□□□ -0.31
CACNA1C-215ENST00000399637 CCP110O43303 1012 aa13.14□□□□□ -0.31
CACNA1C-215ENST00000399637 NEFHP12036 1026 aa13.14□□□□□ -0.31
CACNA1C-215ENST00000399637 PEG3Q9GZU2 1588 aa13.13□□□□□ -0.31
CACNA1C-215ENST00000399637 MYL6BP14649 208 aa13.13□□□□□ -0.31
CACNA1C-215ENST00000399637 RBM25P49756 843 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-215ENST00000399637 RPGRQ92834 1020 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-215ENST00000399637 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
CACNA1C-215ENST00000399637 CWC15Q9P013 229 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-215ENST00000399637 ANKRD18AQ8IVF6 992 aa13.13□□□□□ -0.31
CACNA1C-215ENST00000399637 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
CACNA1C-215ENST00000399637 CDC45O75419 566 aa13.13□□□□□ -0.31
CACNA1C-215ENST00000399637 PSMD1Q99460 953 aa13.13□□□□□ -0.31
CACNA1C-215ENST00000399637 ANKIB1Q9P2G1 1089 aa13.13□□□□□ -0.31
CACNA1C-215ENST00000399637 ERLIN2O94905 339 aa13.13□□□□□ -0.31
CACNA1C-215ENST00000399637 SMC2O95347 1197 aa13.12□□□□□ -0.31
CACNA1C-215ENST00000399637 HMGN5P82970 282 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-215ENST00000399637 ERC1Q8IUD2 1116 aa13.12□□□□□ -0.31
CACNA1C-215ENST00000399637 LRRC9Q6ZRR7 1453 aa13.12□□□□□ -0.31
CACNA1C-215ENST00000399637 H0YHG0 523 aa13.12□□□□□ -0.31
CACNA1C-215ENST00000399637 POLD1P28340 1107 aa13.12□□□□□ -0.31
CACNA1C-215ENST00000399637 CCDC158Q5M9N0 1113 aa13.12□□□□□ -0.31
CACNA1C-215ENST00000399637 SDF4Q9BRK5 362 aa13.12□□□□□ -0.31
CACNA1C-215ENST00000399637 CABP2Q9NPB3 220 aa13.12□□□□□ -0.31
CACNA1C-215ENST00000399637 KIF7Q2M1P5 1343 aa13.12□□□□□ -0.31
CACNA1C-215ENST00000399637 DESP17661 470 aa13.12□□□□□ -0.31
CACNA1C-215ENST00000399637 USP5P45974 858 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms