RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 NUCB2P80303 420 aa17.35■□□□□ 0.37
PCDHGA11-201ENST00000398587 WAPLQ7Z5K2 1190 aa17.34■□□□□ 0.37
PCDHGA11-201ENST00000398587 BACH2Q9BYV9 841 aa17.34■□□□□ 0.37
PCDHGA11-201ENST00000398587 C14orf93Q9H972 538 aaKnown RBP17.34■□□□□ 0.37
PCDHGA11-201ENST00000398587 HDGFL1Q5TGJ6 251 aa17.34■□□□□ 0.37
PCDHGA11-201ENST00000398587 CPLX2Q6PUV4 134 aaKnown RBP17.34■□□□□ 0.37
PCDHGA11-201ENST00000398587 CLASRPQ8N2M8 674 aaKnown RBP17.34■□□□□ 0.37
PCDHGA11-201ENST00000398587 ADAMTS12P58397 1594 aa17.34■□□□□ 0.37
PCDHGA11-201ENST00000398587 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
PCDHGA11-201ENST00000398587 SURF6O75683 361 aaKnown RBP17.33■□□□□ 0.37
PCDHGA11-201ENST00000398587 ITSN2Q9NZM3 1697 aa17.33■□□□□ 0.37
PCDHGA11-201ENST00000398587 GNAI2P04899 355 aa17.33■□□□□ 0.36
PCDHGA11-201ENST00000398587 NOS1P29475 1434 aa17.33■□□□□ 0.36
PCDHGA11-201ENST00000398587 CCT4P50991 539 aaKnown RBP17.32■□□□□ 0.36
PCDHGA11-201ENST00000398587 FBXO31Q5XUX0 539 aaPredicted RBP17.32■□□□□ 0.36
PCDHGA11-201ENST00000398587 C1orf115Q9H7X2 142 aa17.32■□□□□ 0.36
PCDHGA11-201ENST00000398587 KIAA0556O60303 1618 aa17.31■□□□□ 0.36
PCDHGA11-201ENST00000398587 FOXD4L6Q3SYB3 417 aaPredicted RBP17.31■□□□□ 0.36
PCDHGA11-201ENST00000398587 FOXD4L3Q6VB84 417 aaPredicted RBP17.31■□□□□ 0.36
PCDHGA11-201ENST00000398587 KDM5BQ9UGL1 1544 aa17.31■□□□□ 0.36
PCDHGA11-201ENST00000398587 G3V3G9 751 aa17.31■□□□□ 0.36
PCDHGA11-201ENST00000398587 TATP17735 454 aaPredicted RBP17.31■□□□□ 0.36
PCDHGA11-201ENST00000398587 DCAF8Q5TAQ9 597 aa17.31■□□□□ 0.36
PCDHGA11-201ENST00000398587 ZNF530Q6P9A1 599 aaPredicted RBP17.31■□□□□ 0.36
PCDHGA11-201ENST00000398587 ABCC11Q96J66 1382 aa17.3■□□□□ 0.36
PCDHGA11-201ENST00000398587 WDR62O43379 1518 aa17.3■□□□□ 0.36
PCDHGA11-201ENST00000398587 DUOX2Q9NRD8 1548 aa17.3■□□□□ 0.36
PCDHGA11-201ENST00000398587 RALGAPBQ86X10 1494 aa17.29■□□□□ 0.36
PCDHGA11-201ENST00000398587 DISP3Q9P2K9 1392 aa17.29■□□□□ 0.36
PCDHGA11-201ENST00000398587 CFAP43Q8NDM7 1665 aa17.29■□□□□ 0.36
PCDHGA11-201ENST00000398587 SYNE3Q6ZMZ3 975 aa17.29■□□□□ 0.36
PCDHGA11-201ENST00000398587 NFKBIBQ15653 356 aa17.28■□□□□ 0.36
PCDHGA11-201ENST00000398587 CNTROBQ8N137 903 aa17.28■□□□□ 0.36
PCDHGA11-201ENST00000398587 SMC3Q9UQE7 1217 aa17.27■□□□□ 0.36
PCDHGA11-201ENST00000398587 NSD2O96028 1365 aa17.27■□□□□ 0.36
PCDHGA11-201ENST00000398587 NEUROD6Q96NK8 337 aa17.27■□□□□ 0.35
PCDHGA11-201ENST00000398587 WASLO00401 505 aaPredicted RBP17.27■□□□□ 0.35
PCDHGA11-201ENST00000398587 TRDNQ13061 729 aa17.27■□□□□ 0.35
PCDHGA11-201ENST00000398587 AKAP17AQ02040 695 aaKnown RBP17.26■□□□□ 0.35
PCDHGA11-201ENST00000398587 RASSF8Q8NHQ8 419 aa17.26■□□□□ 0.35
PCDHGA11-201ENST00000398587 SRCIN1Q9C0H9 1055 aa17.26■□□□□ 0.35
PCDHGA11-201ENST00000398587 SYCP2Q9BX26 1530 aa17.26■□□□□ 0.35
PCDHGA11-201ENST00000398587 APPP05067 770 aa17.26■□□□□ 0.35
PCDHGA11-201ENST00000398587 NUP160Q12769 1436 aa17.26■□□□□ 0.35
PCDHGA11-201ENST00000398587 RARSP54136 660 aaKnown RBP17.25■□□□□ 0.35
PCDHGA11-201ENST00000398587 MCTP1Q6DN14 999 aa17.25■□□□□ 0.35
PCDHGA11-201ENST00000398587 CPLX1O14810 134 aa17.25■□□□□ 0.35
PCDHGA11-201ENST00000398587 ERC1Q8IUD2 1116 aa17.25■□□□□ 0.35
PCDHGA11-201ENST00000398587 NME9Q86XW9 330 aa17.24■□□□□ 0.35
PCDHGA11-201ENST00000398587 NKTRP30414 1462 aaKnown RBP17.24■□□□□ 0.35
PCDHGA11-201ENST00000398587 ASXL2Q76L83 1435 aa17.24■□□□□ 0.35
PCDHGA11-201ENST00000398587 RABEP1Q15276 862 aa17.24■□□□□ 0.35
PCDHGA11-201ENST00000398587 CHD1LQ86WJ1 897 aa17.23■□□□□ 0.35
PCDHGA11-201ENST00000398587 RPAP2Q8IXW5 612 aaPredicted RBP17.23■□□□□ 0.35
PCDHGA11-201ENST00000398587 KCNH5Q8NCM2 988 aa17.23■□□□□ 0.35
PCDHGA11-201ENST00000398587 PRAG1Q86YV5 1406 aa17.23■□□□□ 0.35
PCDHGA11-201ENST00000398587 VPS37CA5D8V6 355 aaPredicted RBP17.23■□□□□ 0.35
PCDHGA11-201ENST00000398587 TMEM57Q8N5G2 664 aa17.23■□□□□ 0.35
PCDHGA11-201ENST00000398587 MCM2P49736 904 aa17.22■□□□□ 0.35
PCDHGA11-201ENST00000398587 FSD1Q9BTV5 496 aa17.22■□□□□ 0.35
PCDHGA11-201ENST00000398587 SPG7Q9UQ90 795 aa17.22■□□□□ 0.35
PCDHGA11-201ENST00000398587 ALDH1L2Q3SY69 923 aa17.22■□□□□ 0.35
PCDHGA11-201ENST00000398587 IFT57Q9NWB7 429 aa17.22■□□□□ 0.35
PCDHGA11-201ENST00000398587 DUSP27Q5VZP5 1158 aa17.22■□□□□ 0.35
PCDHGA11-201ENST00000398587 SSH1Q8WYL5 1049 aa17.22■□□□□ 0.35
PCDHGA11-201ENST00000398587 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
PCDHGA11-201ENST00000398587 VPS37DQ86XT2 251 aa17.22■□□□□ 0.35
PCDHGA11-201ENST00000398587 LRRCC1Q9C099 1032 aa17.22■□□□□ 0.35
PCDHGA11-201ENST00000398587 A2MP01023 1474 aa17.21■□□□□ 0.35
PCDHGA11-201ENST00000398587 SHANK2Q9UPX8 1470 aa17.21■□□□□ 0.35
PCDHGA11-201ENST00000398587 GOLGA6L19H0YKK7 550 aa17.21■□□□□ 0.35
PCDHGA11-201ENST00000398587 TRIM29Q14134 588 aa17.21■□□□□ 0.35
PCDHGA11-201ENST00000398587 BECN2A8MW95 431 aa17.2■□□□□ 0.34
PCDHGA11-201ENST00000398587 HIP1O00291 1037 aa17.2■□□□□ 0.34
PCDHGA11-201ENST00000398587 PSMA5P28066 241 aa17.2■□□□□ 0.34
PCDHGA11-201ENST00000398587 AMOTL2Q9Y2J4 779 aa17.2■□□□□ 0.34
PCDHGA11-201ENST00000398587 EMILIN1Q9Y6C2 1016 aa17.2■□□□□ 0.34
PCDHGA11-201ENST00000398587 NEK4P51957 841 aa17.2■□□□□ 0.34
PCDHGA11-201ENST00000398587 TRAPPC8Q9Y2L5 1435 aa17.2■□□□□ 0.34
PCDHGA11-201ENST00000398587 GNAT3A8MTJ3 354 aa17.2■□□□□ 0.34
PCDHGA11-201ENST00000398587 NOL10Q9BSC4 688 aaKnown RBP17.2■□□□□ 0.34
PCDHGA11-201ENST00000398587 C20orf194Q5TEA3 1177 aa17.19■□□□□ 0.34
PCDHGA11-201ENST00000398587 WDR7Q9Y4E6 1490 aa17.19■□□□□ 0.34
PCDHGA11-201ENST00000398587 RALYLQ86SE5 291 aaKnown RBP17.19■□□□□ 0.34
PCDHGA11-201ENST00000398587 AMOTL1Q8IY63 956 aa17.19■□□□□ 0.34
PCDHGA11-201ENST00000398587 ZNF518AQ6AHZ1 1483 aa17.19■□□□□ 0.34
PCDHGA11-201ENST00000398587 CABP4P57796 275 aa17.19■□□□□ 0.34
PCDHGA11-201ENST00000398587 WASHC4Q2M389 1173 aa17.19■□□□□ 0.34
PCDHGA11-201ENST00000398587 AMER1Q5JTC6 1135 aaPredicted RBP17.18■□□□□ 0.34
PCDHGA11-201ENST00000398587 TOM1L2Q6ZVM7 507 aa17.18■□□□□ 0.34
PCDHGA11-201ENST00000398587 STRN4Q9NRL3 753 aa17.18■□□□□ 0.34
PCDHGA11-201ENST00000398587 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.18■□□□□ 0.34
PCDHGA11-201ENST00000398587 PRDM11Q9NQV5 511 aa17.18■□□□□ 0.34
PCDHGA11-201ENST00000398587 LRPPRCP42704 1394 aaKnown RBP17.17■□□□□ 0.34
PCDHGA11-201ENST00000398587 BICD2Q8TD16 824 aa17.17■□□□□ 0.34
PCDHGA11-201ENST00000398587 MCM10Q7L590 875 aa17.17■□□□□ 0.34
PCDHGA11-201ENST00000398587 ANKRD36BQ8N2N9 1353 aa17.16■□□□□ 0.34
PCDHGA11-201ENST00000398587 DISP1Q96F81 1524 aa17.16■□□□□ 0.34
PCDHGA11-201ENST00000398587 BTBD11A6QL63 1104 aa17.16■□□□□ 0.34
PCDHGA11-201ENST00000398587 EIF4G3O43432 1585 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms