RNA–Protein interactions for RNA: ENST00000397821.7

SH3KBP1-205, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3KBP1, Length 4,731 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-205ENST00000397821 LRRFIP1Q32MZ4 808 aaKnown RBP17.29■□□□□ 0.36
SH3KBP1-205ENST00000397821 CNTROBQ8N137 903 aa17.29■□□□□ 0.36
SH3KBP1-205ENST00000397821 AQRO60306 1485 aaKnown RBP eCLIP17.29■□□□□ 0.36
SH3KBP1-205ENST00000397821 APPP05067 770 aa17.29■□□□□ 0.36
SH3KBP1-205ENST00000397821 ZMYND15Q9H091 742 aa17.29■□□□□ 0.36
SH3KBP1-205ENST00000397821 TOPBP1Q92547 1522 aa17.29■□□□□ 0.36
SH3KBP1-205ENST00000397821 GNAI3P08754 354 aa17.29■□□□□ 0.36
SH3KBP1-205ENST00000397821 KIAA1107Q9UPP5 1409 aa17.28■□□□□ 0.36
SH3KBP1-205ENST00000397821 TRDNQ13061 729 aa17.28■□□□□ 0.36
SH3KBP1-205ENST00000397821 CLASRPQ8N2M8 674 aaKnown RBP17.28■□□□□ 0.36
SH3KBP1-205ENST00000397821 PSMA5P28066 241 aa17.28■□□□□ 0.36
SH3KBP1-205ENST00000397821 WWC1Q8IX03 1113 aa17.28■□□□□ 0.36
SH3KBP1-205ENST00000397821 PDCL2Q8N4E4 241 aa17.28■□□□□ 0.36
SH3KBP1-205ENST00000397821 CEP89Q96ST8 783 aa17.28■□□□□ 0.36
SH3KBP1-205ENST00000397821 MARCH6O60337 910 aa17.28■□□□□ 0.36
SH3KBP1-205ENST00000397821 C1orf141Q5JVX7 400 aa17.28■□□□□ 0.36
SH3KBP1-205ENST00000397821 CEBPZQ03701 1054 aaKnown RBP17.27■□□□□ 0.36
SH3KBP1-205ENST00000397821 CT47B1P0C2W7 299 aaPredicted RBP17.26■□□□□ 0.35
SH3KBP1-205ENST00000397821 RUFY1Q96T51 708 aa17.26■□□□□ 0.35
SH3KBP1-205ENST00000397821 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
SH3KBP1-205ENST00000397821 TNPO1Q92973 898 aaKnown RBP17.26■□□□□ 0.35
SH3KBP1-205ENST00000397821 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
SH3KBP1-205ENST00000397821 PTPRGP23470 1445 aa17.26■□□□□ 0.35
SH3KBP1-205ENST00000397821 TNMDQ9H2S6 317 aa17.25■□□□□ 0.35
SH3KBP1-205ENST00000397821 CBX1P83916 185 aa17.25■□□□□ 0.35
SH3KBP1-205ENST00000397821 TTLL5Q6EMB2 1281 aa17.25■□□□□ 0.35
SH3KBP1-205ENST00000397821 OLFM4Q6UX06 510 aa17.25■□□□□ 0.35
SH3KBP1-205ENST00000397821 FSD1Q9BTV5 496 aa17.25■□□□□ 0.35
SH3KBP1-205ENST00000397821 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
SH3KBP1-205ENST00000397821 DDX58O95786 925 aaKnown RBP17.24■□□□□ 0.35
SH3KBP1-205ENST00000397821 SSFA2P28290 1259 aa17.24■□□□□ 0.35
SH3KBP1-205ENST00000397821 TMEM57Q8N5G2 664 aa17.24■□□□□ 0.35
SH3KBP1-205ENST00000397821 NAIPQ13075 1403 aa17.24■□□□□ 0.35
SH3KBP1-205ENST00000397821 GRIN2BQ13224 1484 aa17.24■□□□□ 0.35
SH3KBP1-205ENST00000397821 KRT85P78386 507 aa17.24■□□□□ 0.35
SH3KBP1-205ENST00000397821 AK7Q96M32 723 aa17.24■□□□□ 0.35
SH3KBP1-205ENST00000397821 NFXL1Q6ZNB6 911 aa17.23■□□□□ 0.35
SH3KBP1-205ENST00000397821 RALYLQ86SE5 291 aaKnown RBP17.23■□□□□ 0.35
SH3KBP1-205ENST00000397821 H0YHG0 523 aa17.23■□□□□ 0.35
SH3KBP1-205ENST00000397821 MAPK8IP2Q13387 824 aaPredicted RBP17.23■□□□□ 0.35
SH3KBP1-205ENST00000397821 EID1Q9Y6B2 187 aa17.23■□□□□ 0.35
SH3KBP1-205ENST00000397821 FILIP1Q7Z7B0 1213 aa17.22■□□□□ 0.35
SH3KBP1-205ENST00000397821 GNAI2P04899 355 aa17.22■□□□□ 0.35
SH3KBP1-205ENST00000397821 SAFBQ15424 915 aaKnown RBP eCLIP17.22■□□□□ 0.35
SH3KBP1-205ENST00000397821 RARSP54136 660 aaKnown RBP17.21■□□□□ 0.35
SH3KBP1-205ENST00000397821 NEUROD6Q96NK8 337 aa17.21■□□□□ 0.35
SH3KBP1-205ENST00000397821 XRCC6P12956 609 aaKnown RBP eCLIP17.21■□□□□ 0.35
SH3KBP1-205ENST00000397821 CLCN1P35523 988 aa17.21■□□□□ 0.35
SH3KBP1-205ENST00000397821 LARP1BQ659C4 914 aaKnown RBP17.21■□□□□ 0.35
SH3KBP1-205ENST00000397821 EFCAB5A4FU69 1503 aa17.21■□□□□ 0.35
SH3KBP1-205ENST00000397821 DNMBPQ6XZF7 1577 aa17.21■□□□□ 0.35
SH3KBP1-205ENST00000397821 ERICH4A6NGS2 130 aa17.21■□□□□ 0.35
SH3KBP1-205ENST00000397821 LEKR1Q6ZMV7 388 aa17.21■□□□□ 0.35
SH3KBP1-205ENST00000397821 PANK2Q9BZ23 570 aa17.21■□□□□ 0.35
SH3KBP1-205ENST00000397821 SLC4A2P04920 1241 aa17.21■□□□□ 0.34
SH3KBP1-205ENST00000397821 SKIDA1Q1XH10 827 aa17.21■□□□□ 0.34
SH3KBP1-205ENST00000397821 CYP46A1Q9Y6A2 500 aa17.21■□□□□ 0.34
SH3KBP1-205ENST00000397821 ERBINQ96RT1 1412 aa17.2■□□□□ 0.34
SH3KBP1-205ENST00000397821 TIAM1Q13009 1591 aa17.2■□□□□ 0.34
SH3KBP1-205ENST00000397821 DUSP27Q5VZP5 1158 aa17.2■□□□□ 0.34
SH3KBP1-205ENST00000397821 AEBP1Q8IUX7 1158 aa17.19■□□□□ 0.34
SH3KBP1-205ENST00000397821 AIMP1Q12904 312 aaKnown RBP17.19■□□□□ 0.34
SH3KBP1-205ENST00000397821 LRRCC1Q9C099 1032 aa17.19■□□□□ 0.34
SH3KBP1-205ENST00000397821 STK3Q13188 491 aa17.19■□□□□ 0.34
SH3KBP1-205ENST00000397821 FAM177A1Q8N128 213 aaPredicted RBP17.19■□□□□ 0.34
SH3KBP1-205ENST00000397821 ERCC4Q92889 916 aaPredicted RBP17.19■□□□□ 0.34
SH3KBP1-205ENST00000397821 CCDC47Q96A33 483 aaKnown RBP17.19■□□□□ 0.34
SH3KBP1-205ENST00000397821 CCP110O43303 1012 aa17.18■□□□□ 0.34
SH3KBP1-205ENST00000397821 STK38Q15208 465 aa17.18■□□□□ 0.34
SH3KBP1-205ENST00000397821 UPF3BQ9BZI7 483 aaKnown RBP17.18■□□□□ 0.34
SH3KBP1-205ENST00000397821 NUP62CLQ9H1M0 184 aa17.18■□□□□ 0.34
SH3KBP1-205ENST00000397821 MRC2Q9UBG0 1479 aa17.18■□□□□ 0.34
SH3KBP1-205ENST00000397821 NAP1L1P55209 391 aaKnown RBP17.18■□□□□ 0.34
SH3KBP1-205ENST00000397821 WASHC4Q2M389 1173 aa17.18■□□□□ 0.34
SH3KBP1-205ENST00000397821 TTC5Q8N0Z6 440 aa17.18■□□□□ 0.34
SH3KBP1-205ENST00000397821 ZHX1Q9UKY1 873 aaPredicted RBP17.18■□□□□ 0.34
SH3KBP1-205ENST00000397821 TBC1D32Q96NH3 1257 aa17.18■□□□□ 0.34
SH3KBP1-205ENST00000397821 ATP2B1P20020 1258 aa17.17■□□□□ 0.34
SH3KBP1-205ENST00000397821 NCOA1Q15788 1441 aa17.17■□□□□ 0.34
SH3KBP1-205ENST00000397821 KDM4AO75164 1064 aa17.17■□□□□ 0.34
SH3KBP1-205ENST00000397821 IGHDP01880 384 aa17.17■□□□□ 0.34
SH3KBP1-205ENST00000397821 SCAPERQ9BY12 1400 aa17.17■□□□□ 0.34
SH3KBP1-205ENST00000397821 VPS53Q5VIR6 699 aa17.17■□□□□ 0.34
SH3KBP1-205ENST00000397821 CCDC30Q5VVM6 783 aa17.17■□□□□ 0.34
SH3KBP1-205ENST00000397821 MAP4K4O95819 1239 aaPredicted RBP17.16■□□□□ 0.34
SH3KBP1-205ENST00000397821 CAGE1Q8TC20 777 aa17.16■□□□□ 0.34
SH3KBP1-205ENST00000397821 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.16■□□□□ 0.34
SH3KBP1-205ENST00000397821 ME1P48163 572 aa17.16■□□□□ 0.34
SH3KBP1-205ENST00000397821 SSH1Q8WYL5 1049 aa17.16■□□□□ 0.34
SH3KBP1-205ENST00000397821 USP25Q9UHP3 1055 aa17.16■□□□□ 0.34
SH3KBP1-205ENST00000397821 SERPINC1P01008 464 aa17.16■□□□□ 0.34
SH3KBP1-205ENST00000397821 LRPPRCP42704 1394 aaKnown RBP17.16■□□□□ 0.34
SH3KBP1-205ENST00000397821 GTF2E1P29083 439 aaPredicted RBP17.15■□□□□ 0.34
SH3KBP1-205ENST00000397821 AXDND1Q5T1B0 1012 aaPredicted RBP17.15■□□□□ 0.34
SH3KBP1-205ENST00000397821 ZNF396Q96N95 335 aaPredicted RBP17.15■□□□□ 0.34
SH3KBP1-205ENST00000397821 RIC3Q7Z5B4 369 aa17.15■□□□□ 0.34
SH3KBP1-205ENST00000397821 SPATA32Q96LK8 384 aa17.15■□□□□ 0.34
SH3KBP1-205ENST00000397821 BRPF1P55201 1214 aaPredicted RBP17.14■□□□□ 0.33
SH3KBP1-205ENST00000397821 FERMT3Q86UX7 667 aa17.14■□□□□ 0.33
SH3KBP1-205ENST00000397821 TMPOP42166 694 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms