RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 GABPB1Q06547 395 aaPredicted RBP10.79□□□□□ -0.68
TRPM1-202ENST00000397795 SEPT14Q6ZU15 432 aa10.79□□□□□ -0.68
TRPM1-202ENST00000397795 BAZ1AQ9NRL2 1556 aaPredicted RBP10.79□□□□□ -0.68
TRPM1-202ENST00000397795 MCM3P25205 808 aa10.79□□□□□ -0.68
TRPM1-202ENST00000397795 FOXD4L6Q3SYB3 417 aaPredicted RBP10.79□□□□□ -0.68
TRPM1-202ENST00000397795 CCDC181Q5TID7 509 aa10.79□□□□□ -0.68
TRPM1-202ENST00000397795 FOXD4L3Q6VB84 417 aaPredicted RBP10.79□□□□□ -0.68
TRPM1-202ENST00000397795 PSMD1Q99460 953 aa10.79□□□□□ -0.68
TRPM1-202ENST00000397795 OGFRQ9NZT2 677 aa10.79□□□□□ -0.68
TRPM1-202ENST00000397795 LMOD2Q6P5Q4 547 aa10.78□□□□□ -0.68
TRPM1-202ENST00000397795 TRERF1Q96PN7 1200 aa10.78□□□□□ -0.68
TRPM1-202ENST00000397795 REC8O95072 547 aa10.78□□□□□ -0.68
TRPM1-202ENST00000397795 NOL10Q9BSC4 688 aaKnown RBP10.78□□□□□ -0.68
TRPM1-202ENST00000397795 CRACR2AQ9BSW2 395 aa10.78□□□□□ -0.68
TRPM1-202ENST00000397795 PDZRN3Q9UPQ7 1066 aa10.78□□□□□ -0.68
TRPM1-202ENST00000397795 GTF2F1P35269 517 aaKnown RBP eCLIP10.78□□□□□ -0.68
TRPM1-202ENST00000397795 RNF187Q5TA31 235 aaPredicted RBP10.78□□□□□ -0.68
TRPM1-202ENST00000397795 UBXN4Q92575 508 aa10.78□□□□□ -0.68
TRPM1-202ENST00000397795 ZNF500O60304 480 aaPredicted RBP10.78□□□□□ -0.68
TRPM1-202ENST00000397795 IVLP07476 585 aa10.78□□□□□ -0.68
TRPM1-202ENST00000397795 GIGYF2Q6Y7W6 1299 aaKnown RBP10.78□□□□□ -0.68
TRPM1-202ENST00000397795 TRIM34Q9BYJ4 488 aa10.78□□□□□ -0.68
TRPM1-202ENST00000397795 MAP9Q49MG5 647 aa10.78□□□□□ -0.68
TRPM1-202ENST00000397795 FILIP1LQ4L180 1135 aa10.78□□□□□ -0.68
TRPM1-202ENST00000397795 MYRIPQ8NFW9 859 aa10.78□□□□□ -0.68
TRPM1-202ENST00000397795 KIF3BO15066 747 aa10.77□□□□□ -0.68
TRPM1-202ENST00000397795 PPP1R9BQ96SB3 815 aa10.77□□□□□ -0.69
TRPM1-202ENST00000397795 LUC7LQ9NQ29 371 aaKnown RBP10.77□□□□□ -0.69
TRPM1-202ENST00000397795 MAPKBP1O60336 1514 aa10.77□□□□□ -0.69
TRPM1-202ENST00000397795 K7ELQ4 463 aaPredicted RBP10.77□□□□□ -0.69
TRPM1-202ENST00000397795 SMC1AQ14683 1233 aaKnown RBP10.77□□□□□ -0.69
TRPM1-202ENST00000397795 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.77□□□□□ -0.69
TRPM1-202ENST00000397795 V9GYY5 206 aaPredicted RBP10.77□□□□□ -0.69
TRPM1-202ENST00000397795 TXLNAP40222 546 aa10.77□□□□□ -0.69
TRPM1-202ENST00000397795 KRT222Q8N1A0 295 aa10.77□□□□□ -0.69
TRPM1-202ENST00000397795 TSPY4P0CV99 314 aa10.76□□□□□ -0.69
TRPM1-202ENST00000397795 TSPY10P0CW01 314 aa10.76□□□□□ -0.69
TRPM1-202ENST00000397795 PIP4K2AP48426 406 aaPredicted RBP10.76□□□□□ -0.69
TRPM1-202ENST00000397795 VPS53Q5VIR6 699 aa10.76□□□□□ -0.69
TRPM1-202ENST00000397795 SMC2O95347 1197 aa10.76□□□□□ -0.69
TRPM1-202ENST00000397795 FILIP1Q7Z7B0 1213 aa10.76□□□□□ -0.69
TRPM1-202ENST00000397795 ANKRD30AQ9BXX3 1397 aa10.76□□□□□ -0.69
TRPM1-202ENST00000397795 IGSF3O75054 1194 aa10.76□□□□□ -0.69
TRPM1-202ENST00000397795 GTF2E1P29083 439 aaPredicted RBP10.76□□□□□ -0.69
TRPM1-202ENST00000397795 CWC22Q9HCG8 908 aaKnown RBP10.76□□□□□ -0.69
TRPM1-202ENST00000397795 CEP83Q9Y592 693 aa10.76□□□□□ -0.69
TRPM1-202ENST00000397795 SYNE3Q6ZMZ3 975 aa10.75□□□□□ -0.69
TRPM1-202ENST00000397795 BMS1Q14692 1282 aaKnown RBP10.75□□□□□ -0.69
TRPM1-202ENST00000397795 NINLQ9Y2I6 1382 aa10.75□□□□□ -0.69
TRPM1-202ENST00000397795 NCOA1Q15788 1441 aa10.75□□□□□ -0.69
TRPM1-202ENST00000397795 ARID3CA6NKF2 412 aa10.75□□□□□ -0.69
TRPM1-202ENST00000397795 C6orf163Q5TEZ5 329 aa10.75□□□□□ -0.69
TRPM1-202ENST00000397795 MIPOL1Q8TD10 442 aa10.75□□□□□ -0.69
TRPM1-202ENST00000397795 C20orf194Q5TEA3 1177 aa10.75□□□□□ -0.69
TRPM1-202ENST00000397795 DDX46Q7L014 1031 aaKnown RBP10.75□□□□□ -0.69
TRPM1-202ENST00000397795 NOLC1Q14978 699 aaKnown RBP eCLIP10.74□□□□□ -0.69
TRPM1-202ENST00000397795 TTC31Q49AM3 519 aaPredicted RBP10.74□□□□□ -0.69
TRPM1-202ENST00000397795 ERICH3Q5RHP9 1530 aa10.74□□□□□ -0.69
TRPM1-202ENST00000397795 EPS15P42566 896 aa10.74□□□□□ -0.69
TRPM1-202ENST00000397795 RIPK4P57078 832 aa10.74□□□□□ -0.69
TRPM1-202ENST00000397795 ST20-MTHFSA0A0A6YYL1 179 aa10.74□□□□□ -0.69
TRPM1-202ENST00000397795 A0A1B0GUA9 196 aa10.74□□□□□ -0.69
TRPM1-202ENST00000397795 VGFO15240 615 aaPredicted RBP10.74□□□□□ -0.69
TRPM1-202ENST00000397795 ZFYVE27Q5T4F4 411 aa10.74□□□□□ -0.69
TRPM1-202ENST00000397795 NAP1L3Q99457 506 aaPredicted RBP10.74□□□□□ -0.69
TRPM1-202ENST00000397795 SPECC1LQ69YQ0 1117 aa10.74□□□□□ -0.69
TRPM1-202ENST00000397795 KRI1Q8N9T8 703 aaKnown RBP10.74□□□□□ -0.69
TRPM1-202ENST00000397795 ZNHIT6Q9NWK9 470 aaKnown RBP10.74□□□□□ -0.69
TRPM1-202ENST00000397795 SMC3Q9UQE7 1217 aa10.74□□□□□ -0.69
TRPM1-202ENST00000397795 ANKRD18BA2A2Z9 1011 aa10.73□□□□□ -0.69
TRPM1-202ENST00000397795 NUP133Q8WUM0 1156 aa10.73□□□□□ -0.69
TRPM1-202ENST00000397795 GOLIM4O00461 696 aa10.73□□□□□ -0.69
TRPM1-202ENST00000397795 ZFYP08048 801 aaPredicted RBP10.73□□□□□ -0.69
TRPM1-202ENST00000397795 ZKSCAN1P17029 563 aaPredicted RBP10.73□□□□□ -0.69
TRPM1-202ENST00000397795 HSPA4P34932 840 aa10.73□□□□□ -0.69
TRPM1-202ENST00000397795 PANK1Q8TE04 598 aa10.73□□□□□ -0.69
TRPM1-202ENST00000397795 RSRC1Q96IZ7 334 aaKnown RBP10.73□□□□□ -0.69
TRPM1-202ENST00000397795 RTF1Q92541 710 aaKnown RBP10.73□□□□□ -0.69
TRPM1-202ENST00000397795 ZKSCAN2Q63HK3 967 aa10.73□□□□□ -0.69
TRPM1-202ENST00000397795 ZMAT2Q96NC0 199 aaKnown RBP10.73□□□□□ -0.69
TRPM1-202ENST00000397795 MAP3K1Q13233 1512 aa10.73□□□□□ -0.69
TRPM1-202ENST00000397795 DDX23Q9BUQ8 820 aaKnown RBP10.72□□□□□ -0.69
TRPM1-202ENST00000397795 SYCE3A1L190 88 aa10.72□□□□□ -0.69
TRPM1-202ENST00000397795 POTEB2H3BUK9 544 aa10.72□□□□□ -0.69
TRPM1-202ENST00000397795 RUFY2Q8WXA3 655 aa10.72□□□□□ -0.69
TRPM1-202ENST00000397795 ARID4AP29374 1257 aaPredicted RBP10.72□□□□□ -0.69
TRPM1-202ENST00000397795 GBP6Q6ZN66 633 aa10.72□□□□□ -0.69
TRPM1-202ENST00000397795 MPNDQ8N594 471 aa10.72□□□□□ -0.69
TRPM1-202ENST00000397795 SMC4Q9NTJ3 1288 aa10.71□□□□□ -0.69
TRPM1-202ENST00000397795 WIZO95785 1651 aa10.71□□□□□ -0.69
TRPM1-202ENST00000397795 CBFA2T2O43439 604 aa10.71□□□□□ -0.69
TRPM1-202ENST00000397795 TOMM22Q9NS69 142 aa10.71□□□□□ -0.69
TRPM1-202ENST00000397795 HMGB1P1B2RPK0 211 aaPredicted RBP10.71□□□□□ -0.7
TRPM1-202ENST00000397795 FBXW7Q969H0 707 aa10.71□□□□□ -0.7
TRPM1-202ENST00000397795 VPS37CA5D8V6 355 aaPredicted RBP10.71□□□□□ -0.7
TRPM1-202ENST00000397795 NOL3O60936 208 aaKnown RBP10.71□□□□□ -0.7
TRPM1-202ENST00000397795 ZSCAN23Q3MJ62 389 aa10.71□□□□□ -0.7
TRPM1-202ENST00000397795 BANK1Q8NDB2 785 aa10.7□□□□□ -0.7
TRPM1-202ENST00000397795 CCDC148Q8NFR7 591 aa10.7□□□□□ -0.7
TRPM1-202ENST00000397795 SMARCC1Q92922 1105 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms