RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 ACEP12821 1306 aa27.16■■□□□ 1.94
MCF2L-207ENST00000397024 PLEKHG3A1L390 1219 aa27.15■■□□□ 1.94
MCF2L-207ENST00000397024 NBPF8Q3BBV2 869 aa27.15■■□□□ 1.94
MCF2L-207ENST00000397024 NWD2Q9ULI1 1742 aa27.14■■□□□ 1.94
MCF2L-207ENST00000397024 POLR3AO14802 1390 aaPredicted RBP27.13■■□□□ 1.93
MCF2L-207ENST00000397024 TOPAZ1Q8N9V7 1692 aa27.12■■□□□ 1.93
MCF2L-207ENST00000397024 CABP2Q9NPB3 220 aa27.12■■□□□ 1.93
MCF2L-207ENST00000397024 BTG4Q9NY30 223 aa27.12■■□□□ 1.93
MCF2L-207ENST00000397024 CRYBG1Q9Y4K1 1723 aa27.11■■□□□ 1.93
MCF2L-207ENST00000397024 SRPK2P78362 688 aaKnown RBP27.11■■□□□ 1.93
MCF2L-207ENST00000397024 NUTM2GQ5VZR2 741 aa27.11■■□□□ 1.93
MCF2L-207ENST00000397024 CCDC9Q9Y3X0 531 aaKnown RBP27.11■■□□□ 1.93
MCF2L-207ENST00000397024 ONECUT3O60422 494 aaPredicted RBP27.1■■□□□ 1.93
MCF2L-207ENST00000397024 SEPT12Q8IYM1 358 aa27.1■■□□□ 1.93
MCF2L-207ENST00000397024 TRPM1Q7Z4N2 1603 aa27.08■■□□□ 1.93
MCF2L-207ENST00000397024 BRWD3Q6RI45 1802 aa27.07■■□□□ 1.92
MCF2L-207ENST00000397024 QRICH2Q9H0J4 1663 aa27.06■■□□□ 1.92
MCF2L-207ENST00000397024 NRAPQ86VF7 1730 aa27.05■■□□□ 1.92
MCF2L-207ENST00000397024 COL14A1Q05707 1796 aaKnown RBP27.05■■□□□ 1.92
MCF2L-207ENST00000397024 PRDM11Q9NQV5 511 aa27.04■■□□□ 1.92
MCF2L-207ENST00000397024 PPIP5K1Q6PFW1 1433 aa27.04■■□□□ 1.92
MCF2L-207ENST00000397024 CHRNA2Q15822 529 aa27.03■■□□□ 1.92
MCF2L-207ENST00000397024 ROCK2O75116 1388 aaKnown RBP27.02■■□□□ 1.92
MCF2L-207ENST00000397024 KIAA0232Q92628 1395 aa27.02■■□□□ 1.92
MCF2L-207ENST00000397024 ZC3H6P61129 1189 aaKnown RBP27.02■■□□□ 1.92
MCF2L-207ENST00000397024 CABP1Q9NZU7 370 aa27.02■■□□□ 1.92
MCF2L-207ENST00000397024 FAM98CQ17RN3 349 aaKnown RBP27.01■■□□□ 1.91
MCF2L-207ENST00000397024 ABTB2Q8N961 1025 aa27.01■■□□□ 1.91
MCF2L-207ENST00000397024 CCDC125Q86Z20 511 aa27■■□□□ 1.91
MCF2L-207ENST00000397024 PHRF1Q9P1Y6 1649 aaKnown RBP26.99■■□□□ 1.91
MCF2L-207ENST00000397024 SPATA31A5Q5VU36 1347 aa26.98■■□□□ 1.91
MCF2L-207ENST00000397024 SPATA31A7Q8IWB4 1347 aa26.98■■□□□ 1.91
MCF2L-207ENST00000397024 KRT27Q7Z3Y8 459 aa26.97■■□□□ 1.91
MCF2L-207ENST00000397024 EVC2Q86UK5 1308 aa26.96■■□□□ 1.91
MCF2L-207ENST00000397024 A0A0G2JS52 829 aa26.95■■□□□ 1.9
MCF2L-207ENST00000397024 MYT1Q01538 1121 aa26.95■■□□□ 1.9
MCF2L-207ENST00000397024 SRCAPQ6ZRS2 3230 aa26.95■■□□□ 1.9
MCF2L-207ENST00000397024 USP19O94966 1318 aa26.94■■□□□ 1.9
MCF2L-207ENST00000397024 NLRP13Q86W25 1043 aa26.93■■□□□ 1.9
MCF2L-207ENST00000397024 TRIM26Q12899 539 aaPredicted RBP26.92■■□□□ 1.9
MCF2L-207ENST00000397024 STRN4Q9NRL3 753 aa26.92■■□□□ 1.9
MCF2L-207ENST00000397024 USP6P35125 1406 aa26.91■■□□□ 1.9
MCF2L-207ENST00000397024 BLMP54132 1417 aaPredicted RBP26.91■■□□□ 1.9
MCF2L-207ENST00000397024 GCP02774 474 aa26.91■■□□□ 1.9
MCF2L-207ENST00000397024 SPATA31A1Q5TZJ5 1347 aa26.9■■□□□ 1.9
MCF2L-207ENST00000397024 NRKQ7Z2Y5 1582 aa26.9■■□□□ 1.9
MCF2L-207ENST00000397024 DEFB132Q7Z7B7 95 aa26.9■■□□□ 1.9
MCF2L-207ENST00000397024 BRD4O60885 1362 aaPredicted RBP26.89■■□□□ 1.9
MCF2L-207ENST00000397024 SSH2Q76I76 1423 aa26.89■■□□□ 1.89
MCF2L-207ENST00000397024 CPDO75976 1380 aa26.88■■□□□ 1.89
MCF2L-207ENST00000397024 FAM182BQ5T319 152 aa26.88■■□□□ 1.89
MCF2L-207ENST00000397024 CARD11Q9BXL7 1154 aa26.88■■□□□ 1.89
MCF2L-207ENST00000397024 CAMTA1Q9Y6Y1 1673 aa26.88■■□□□ 1.89
MCF2L-207ENST00000397024 NLRP6P59044 892 aa26.87■■□□□ 1.89
MCF2L-207ENST00000397024 TONSLQ96HA7 1378 aa26.86■■□□□ 1.89
MCF2L-207ENST00000397024 EVA1CP58658 441 aa26.86■■□□□ 1.89
MCF2L-207ENST00000397024 LARP1Q6PKG0 1096 aaKnown RBP26.84■■□□□ 1.89
MCF2L-207ENST00000397024 ZRANB1Q9UGI0 708 aa26.84■■□□□ 1.89
MCF2L-207ENST00000397024 THSD7AQ9UPZ6 1657 aa26.84■■□□□ 1.89
MCF2L-207ENST00000397024 USP35Q9P2H5 1018 aa26.83■■□□□ 1.89
MCF2L-207ENST00000397024 LMO7Q8WWI1 1683 aa26.82■■□□□ 1.88
MCF2L-207ENST00000397024 ZNF692Q9BU19 519 aaPredicted RBP26.82■■□□□ 1.88
MCF2L-207ENST00000397024 TTC21BQ7Z4L5 1316 aa26.82■■□□□ 1.88
MCF2L-207ENST00000397024 SF3B2Q13435 895 aaKnown RBP26.81■■□□□ 1.88
MCF2L-207ENST00000397024 SBNO2Q9Y2G9 1366 aa26.8■■□□□ 1.88
MCF2L-207ENST00000397024 PIK3C2AO00443 1686 aa26.79■■□□□ 1.88
MCF2L-207ENST00000397024 ZBTB7CA1YPR0 619 aa26.79■■□□□ 1.88
MCF2L-207ENST00000397024 CPSF1Q10570 1443 aaKnown RBP26.79■■□□□ 1.88
MCF2L-207ENST00000397024 SLIT3O75094 1523 aa26.78■■□□□ 1.88
MCF2L-207ENST00000397024 AKAP12Q02952 1782 aa26.78■■□□□ 1.88
MCF2L-207ENST00000397024 BARGINQ6ZT62 677 aa26.77■■□□□ 1.88
MCF2L-207ENST00000397024 TCP11L2Q8N4U5 519 aa26.75■■□□□ 1.87
MCF2L-207ENST00000397024 AATKQ6ZMQ8 1374 aa26.74■■□□□ 1.87
MCF2L-207ENST00000397024 KTN1Q86UP2 1357 aaKnown RBP26.74■■□□□ 1.87
MCF2L-207ENST00000397024 COL5A2P05997 1499 aaPredicted RBP26.74■■□□□ 1.87
MCF2L-207ENST00000397024 AXIN2Q9Y2T1 843 aa26.73■■□□□ 1.87
MCF2L-207ENST00000397024 TTC21AQ8NDW8 1320 aa26.72■■□□□ 1.87
MCF2L-207ENST00000397024 SLC12A5Q9H2X9 1139 aa26.72■■□□□ 1.87
MCF2L-207ENST00000397024 COL18A1P39060 1754 aa26.71■■□□□ 1.87
MCF2L-207ENST00000397024 SOX12O15370 315 aa26.71■■□□□ 1.87
MCF2L-207ENST00000397024 BAG6P46379 1132 aa26.71■■□□□ 1.87
MCF2L-207ENST00000397024 EN1Q05925 392 aaPredicted RBP26.71■■□□□ 1.87
MCF2L-207ENST00000397024 ARHGEF25Q86VW2 580 aa26.71■■□□□ 1.87
MCF2L-207ENST00000397024 CD163L1Q9NR16 1453 aa26.7■■□□□ 1.87
MCF2L-207ENST00000397024 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.7■■□□□ 1.86
MCF2L-207ENST00000397024 TMC1Q8TDI8 760 aa26.7■■□□□ 1.86
MCF2L-207ENST00000397024 FAM196AQ6ZSG2 479 aa26.69■■□□□ 1.86
MCF2L-207ENST00000397024 THRAP3Q9Y2W1 955 aaKnown RBP26.69■■□□□ 1.86
MCF2L-207ENST00000397024 TRIM37O94972 964 aa26.68■■□□□ 1.86
MCF2L-207ENST00000397024 PDE3BQ13370 1112 aa26.68■■□□□ 1.86
MCF2L-207ENST00000397024 TESK2Q96S53 571 aa26.68■■□□□ 1.86
MCF2L-207ENST00000397024 CRB1P82279 1406 aa26.67■■□□□ 1.86
MCF2L-207ENST00000397024 ST20-MTHFSA0A0A6YYL1 179 aa26.67■■□□□ 1.86
MCF2L-207ENST00000397024 KCNH5Q8NCM2 988 aa26.67■■□□□ 1.86
MCF2L-207ENST00000397024 MON2Q7Z3U7 1717 aa26.67■■□□□ 1.86
MCF2L-207ENST00000397024 RGPD1P0DJD0 1748 aa26.66■■□□□ 1.86
MCF2L-207ENST00000397024 NME9Q86XW9 330 aa26.65■■□□□ 1.86
MCF2L-207ENST00000397024 TNS1Q9HBL0 1735 aaKnown RBP26.63■■□□□ 1.85
MCF2L-207ENST00000397024 TOM1L2Q6ZVM7 507 aa26.63■■□□□ 1.85
MCF2L-207ENST00000397024 PUS7Q96PZ0 661 aaKnown RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms