RNA–Protein interactions for RNA: ENST00000396185.7

CTNNB1-203, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-203ENST00000396185 SLC12A5Q9H2X9 1139 aa15.31■□□□□ 0.04
CTNNB1-203ENST00000396185 ISY1Q9ULR0 285 aaKnown RBP15.31■□□□□ 0.04
CTNNB1-203ENST00000396185 ARHGEF40Q8TER5 1519 aa15.31■□□□□ 0.04
CTNNB1-203ENST00000396185 TRIM35Q9UPQ4 493 aa15.31■□□□□ 0.04
CTNNB1-203ENST00000396185 PTCH1Q13635 1447 aa15.31■□□□□ 0.04
CTNNB1-203ENST00000396185 ZKSCAN2Q63HK3 967 aa15.3■□□□□ 0.04
CTNNB1-203ENST00000396185 TNNQ9UQP3 1299 aa15.3■□□□□ 0.04
CTNNB1-203ENST00000396185 A0A1W2PP64 1363 aa15.3■□□□□ 0.04
CTNNB1-203ENST00000396185 EVC2Q86UK5 1308 aa15.3■□□□□ 0.04
CTNNB1-203ENST00000396185 CFAP53Q96M91 514 aa15.3■□□□□ 0.04
CTNNB1-203ENST00000396185 FAM135BQ49AJ0 1406 aa15.3■□□□□ 0.04
CTNNB1-203ENST00000396185 DZIP1LQ8IYY4 767 aaKnown RBP15.28■□□□□ 0.04
CTNNB1-203ENST00000396185 ZNF428Q96B54 188 aa15.28■□□□□ 0.04
CTNNB1-203ENST00000396185 ZBTB40Q9NUA8 1239 aa15.28■□□□□ 0.04
CTNNB1-203ENST00000396185 NRKQ7Z2Y5 1582 aa15.28■□□□□ 0.04
CTNNB1-203ENST00000396185 ALDH1L2Q3SY69 923 aa15.28■□□□□ 0.04
CTNNB1-203ENST00000396185 UPF2Q9HAU5 1272 aaKnown RBP15.28■□□□□ 0.04
CTNNB1-203ENST00000396185 KNDC1Q76NI1 1749 aa15.27■□□□□ 0.04
CTNNB1-203ENST00000396185 MCM4P33991 863 aa15.27■□□□□ 0.04
CTNNB1-203ENST00000396185 DDX19BQ9UMR2 479 aa15.27■□□□□ 0.04
CTNNB1-203ENST00000396185 MON2Q7Z3U7 1717 aa15.27■□□□□ 0.03
CTNNB1-203ENST00000396185 CLEC17AQ6ZS10 378 aa15.27■□□□□ 0.03
CTNNB1-203ENST00000396185 ATP7BP35670 1465 aa15.26■□□□□ 0.03
CTNNB1-203ENST00000396185 ATAD2Q6PL18 1390 aa15.26■□□□□ 0.03
CTNNB1-203ENST00000396185 TRIM27P14373 513 aa15.26■□□□□ 0.03
CTNNB1-203ENST00000396185 KIF16BQ96L93 1317 aa15.26■□□□□ 0.03
CTNNB1-203ENST00000396185 RTN4Q9NQC3 1192 aaKnown RBP15.26■□□□□ 0.03
CTNNB1-203ENST00000396185 DLG5Q8TDM6 1919 aa15.25■□□□□ 0.03
CTNNB1-203ENST00000396185 NUCB1Q02818 461 aa15.25■□□□□ 0.03
CTNNB1-203ENST00000396185 CHMP5Q9NZZ3 219 aa15.25■□□□□ 0.03
CTNNB1-203ENST00000396185 ALKQ9UM73 1620 aa15.25■□□□□ 0.03
CTNNB1-203ENST00000396185 ATF7IPQ6VMQ6 1270 aa15.25■□□□□ 0.03
CTNNB1-203ENST00000396185 TUBGCP6Q96RT7 1819 aa15.25■□□□□ 0.03
CTNNB1-203ENST00000396185 KIF24Q5T7B8 1368 aa15.24■□□□□ 0.03
CTNNB1-203ENST00000396185 AKAP12Q02952 1782 aa15.24■□□□□ 0.03
CTNNB1-203ENST00000396185 CANXP27824 592 aaKnown RBP15.24■□□□□ 0.03
CTNNB1-203ENST00000396185 TMPOP42166 694 aaKnown RBP15.24■□□□□ 0.03
CTNNB1-203ENST00000396185 YTHDC2Q9H6S0 1430 aaKnown RBP15.24■□□□□ 0.03
CTNNB1-203ENST00000396185 C22orf23Q9BZE7 217 aa15.24■□□□□ 0.03
CTNNB1-203ENST00000396185 CIZ1Q9ULV3 898 aaPredicted RBP15.23■□□□□ 0.03
CTNNB1-203ENST00000396185 XRCC6P12956 609 aaKnown RBP eCLIP15.22■□□□□ 0.036e-9■□□□□ 9.9
CTNNB1-203ENST00000396185 UBE2Q2Q8WVN8 375 aa15.22■□□□□ 0.03
CTNNB1-203ENST00000396185 ARHGAP45Q92619 1136 aa15.22■□□□□ 0.03
CTNNB1-203ENST00000396185 CFAP65Q6ZU64 1925 aaKnown RBP15.22■□□□□ 0.03
CTNNB1-203ENST00000396185 RRAGDQ9NQL2 400 aaPredicted RBP15.22■□□□□ 0.03
CTNNB1-203ENST00000396185 TRAK1Q9UPV9 953 aa15.22■□□□□ 0.03
CTNNB1-203ENST00000396185 RRP7AQ9Y3A4 280 aaKnown RBP15.22■□□□□ 0.03
CTNNB1-203ENST00000396185 IBTKQ9P2D0 1353 aaPredicted RBP15.21■□□□□ 0.03
CTNNB1-203ENST00000396185 VGFO15240 615 aaPredicted RBP15.21■□□□□ 0.03
CTNNB1-203ENST00000396185 MAP2P11137 1827 aaKnown RBP15.21■□□□□ 0.03
CTNNB1-203ENST00000396185 C3P01024 1663 aa15.21■□□□□ 0.03
CTNNB1-203ENST00000396185 SSH1Q8WYL5 1049 aa15.21■□□□□ 0.03
CTNNB1-203ENST00000396185 KIF2CQ99661 725 aa15.21■□□□□ 0.02
CTNNB1-203ENST00000396185 N4BP2Q86UW6 1770 aaPredicted RBP15.2■□□□□ 0.02
CTNNB1-203ENST00000396185 CLCN1P35523 988 aa15.2■□□□□ 0.02
CTNNB1-203ENST00000396185 CDK12Q9NYV4 1490 aaPredicted RBP15.2■□□□□ 0.02
CTNNB1-203ENST00000396185 BMP2KLQ5H9B9 411 aa15.2■□□□□ 0.02
CTNNB1-203ENST00000396185 NRXN3Q9Y4C0 1643 aa15.2■□□□□ 0.02
CTNNB1-203ENST00000396185 RGPD1P0DJD0 1748 aa15.19■□□□□ 0.02
CTNNB1-203ENST00000396185 DDX11L8A8MPP1 907 aa15.18■□□□□ 0.02
CTNNB1-203ENST00000396185 EXOSC9Q06265 439 aaKnown RBP15.18■□□□□ 0.02
CTNNB1-203ENST00000396185 NALCNQ8IZF0 1738 aa15.18■□□□□ 0.02
CTNNB1-203ENST00000396185 FYB1O15117 783 aa15.17■□□□□ 0.02
CTNNB1-203ENST00000396185 SLKQ9H2G2 1235 aaPredicted RBP15.17■□□□□ 0.02
CTNNB1-203ENST00000396185 PNNQ9H307 717 aaKnown RBP15.17■□□□□ 0.02
CTNNB1-203ENST00000396185 CPSF1Q10570 1443 aaKnown RBP15.17■□□□□ 0.02
CTNNB1-203ENST00000396185 MRE11P49959 708 aa15.17■□□□□ 0.02
CTNNB1-203ENST00000396185 ABCC4O15439 1325 aa15.17■□□□□ 0.02
CTNNB1-203ENST00000396185 RAB3GAP1Q15042 981 aa15.16■□□□□ 0.02
CTNNB1-203ENST00000396185 GOLGA6L3A6NEY3 463 aa15.16■□□□□ 0.02
CTNNB1-203ENST00000396185 ZNF853P0CG23 659 aa15.16■□□□□ 0.02
CTNNB1-203ENST00000396185 SPATA31D1Q6ZQQ2 1576 aa15.16■□□□□ 0.02
CTNNB1-203ENST00000396185 AATKQ6ZMQ8 1374 aa15.16■□□□□ 0.02
CTNNB1-203ENST00000396185 FCHSD2O94868 740 aa15.16■□□□□ 0.02
CTNNB1-203ENST00000396185 PTMSP20962 102 aa15.16■□□□□ 0.02
CTNNB1-203ENST00000396185 SLC52A1Q9NWF4 448 aa15.15■□□□□ 0.02
CTNNB1-203ENST00000396185 NOB1Q9ULX3 412 aaKnown RBP15.15■□□□□ 0.02
CTNNB1-203ENST00000396185 U2AF1L5P0DN76 240 aaPredicted RBP15.15■□□□□ 0.02
CTNNB1-203ENST00000396185 U2AF1Q01081 240 aaKnown RBP eCLIP15.15■□□□□ 0.02
CTNNB1-203ENST00000396185 TMEM132EQ6IEE7 984 aa15.15■□□□□ 0.02
CTNNB1-203ENST00000396185 TMEM57Q8N5G2 664 aa15.15■□□□□ 0.02
CTNNB1-203ENST00000396185 TOPAZ1Q8N9V7 1692 aa15.15■□□□□ 0.02
CTNNB1-203ENST00000396185 ZBTB7BO15156 539 aaPredicted RBP15.15■□□□□ 0.02
CTNNB1-203ENST00000396185 TRAK2O60296 914 aa15.15■□□□□ 0.02
CTNNB1-203ENST00000396185 FTSJ3Q8IY81 847 aaKnown RBP15.15■□□□□ 0.02
CTNNB1-203ENST00000396185 GCC1Q96CN9 775 aa15.15■□□□□ 0.02
CTNNB1-203ENST00000396185 BCL2L13Q9BXK5 485 aa15.15■□□□□ 0.02
CTNNB1-203ENST00000396185 SMC4Q9NTJ3 1288 aa15.15■□□□□ 0.02
CTNNB1-203ENST00000396185 AGLP35573 1532 aa15.14■□□□□ 0.02
CTNNB1-203ENST00000396185 IPO8O15397 1037 aaKnown RBP15.14■□□□□ 0.01
CTNNB1-203ENST00000396185 TSR2Q969E8 191 aaKnown RBP15.14■□□□□ 0.01
CTNNB1-203ENST00000396185 CHD1LQ86WJ1 897 aa15.13■□□□□ 0.01
CTNNB1-203ENST00000396185 NEUROD2Q15784 382 aa15.12■□□□□ 0.01
CTNNB1-203ENST00000396185 CHMP4BQ9H444 224 aaKnown RBP15.12■□□□□ 0.01
CTNNB1-203ENST00000396185 ITSN1Q15811 1721 aa15.11■□□□□ 0.01
CTNNB1-203ENST00000396185 CPS1P31327 1500 aa15.11■□□□□ 0.01
CTNNB1-203ENST00000396185 MRPL50Q8N5N7 158 aaKnown RBP15.1■□□□□ 0.01
CTNNB1-203ENST00000396185 RGS12O14924 1447 aa15.1■□□□□ 0.01
CTNNB1-203ENST00000396185 SKOR2Q2VWA4 1001 aaPredicted RBP15.1■□□□□ 0.01
CTNNB1-203ENST00000396185 TERF2IPQ9NYB0 399 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms