RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 FAM83GA6ND36 823 aa19.76■□□□□ 0.75
SCAF11-203ENST00000395453 FAM98CQ17RN3 349 aaKnown RBP19.76■□□□□ 0.75
SCAF11-203ENST00000395453 RGPD8O14715 1765 aaPredicted RBP19.75■□□□□ 0.75
SCAF11-203ENST00000395453 EN1Q05925 392 aaPredicted RBP19.75■□□□□ 0.75
SCAF11-203ENST00000395453 SAFB2Q14151 953 aaKnown RBP eCLIP19.75■□□□□ 0.75
SCAF11-203ENST00000395453 POGKQ9P215 609 aa19.75■□□□□ 0.75
SCAF11-203ENST00000395453 TRAK1Q9UPV9 953 aa19.74■□□□□ 0.75
SCAF11-203ENST00000395453 R3HDM1Q15032 1099 aaKnown RBP19.72■□□□□ 0.75
SCAF11-203ENST00000395453 BTG4Q9NY30 223 aa19.72■□□□□ 0.75
SCAF11-203ENST00000395453 ADGRB2O60241 1585 aa19.72■□□□□ 0.75
SCAF11-203ENST00000395453 ABCA3Q99758 1704 aa19.72■□□□□ 0.75
SCAF11-203ENST00000395453 RGPD1P0DJD0 1748 aa19.69■□□□□ 0.74
SCAF11-203ENST00000395453 DISP2A7MBM2 1401 aa19.69■□□□□ 0.74
SCAF11-203ENST00000395453 ANKARQ7Z5J8 1434 aa19.69■□□□□ 0.74
SCAF11-203ENST00000395453 NRAPQ86VF7 1730 aa19.68■□□□□ 0.74
SCAF11-203ENST00000395453 PMFBP1Q8TBY8 1022 aa19.68■□□□□ 0.74
SCAF11-203ENST00000395453 FAM182BQ5T319 152 aa19.67■□□□□ 0.74
SCAF11-203ENST00000395453 HIRIP3Q9BW71 556 aaPredicted RBP19.67■□□□□ 0.74
SCAF11-203ENST00000395453 U3KPZ7 1027 aaPredicted RBP19.67■□□□□ 0.74
SCAF11-203ENST00000395453 SPATA31A5Q5VU36 1347 aa19.67■□□□□ 0.74
SCAF11-203ENST00000395453 SPATA31A7Q8IWB4 1347 aa19.67■□□□□ 0.74
SCAF11-203ENST00000395453 MINK1Q8N4C8 1332 aaPredicted RBP19.66■□□□□ 0.74
SCAF11-203ENST00000395453 WASLO00401 505 aaPredicted RBP19.65■□□□□ 0.74
SCAF11-203ENST00000395453 COL14A1Q05707 1796 aaKnown RBP19.64■□□□□ 0.74
SCAF11-203ENST00000395453 EZH2Q15910 746 aaKnown RBP19.64■□□□□ 0.73
SCAF11-203ENST00000395453 PRR36Q9H6K5 1346 aa19.64■□□□□ 0.73
SCAF11-203ENST00000395453 GPRASP1Q5JY77 1395 aa19.64■□□□□ 0.73
SCAF11-203ENST00000395453 EIF3AQ14152 1382 aaKnown RBP19.63■□□□□ 0.73
SCAF11-203ENST00000395453 ARHGEF28Q8N1W1 1705 aaKnown RBP19.63■□□□□ 0.73
SCAF11-203ENST00000395453 KIAA1210Q9ULL0 1709 aa19.63■□□□□ 0.73
SCAF11-203ENST00000395453 TULP4Q9NRJ4 1543 aa19.62■□□□□ 0.73
SCAF11-203ENST00000395453 FAM196AQ6ZSG2 479 aa19.61■□□□□ 0.73
SCAF11-203ENST00000395453 CAMKK2Q96RR4 588 aa19.61■□□□□ 0.73
SCAF11-203ENST00000395453 TNS1Q9HBL0 1735 aaKnown RBP19.6■□□□□ 0.73
SCAF11-203ENST00000395453 YY1P25490 414 aa19.6■□□□□ 0.73
SCAF11-203ENST00000395453 THSD7AQ9UPZ6 1657 aa19.6■□□□□ 0.73
SCAF11-203ENST00000395453 TRPM3Q9HCF6 1732 aaPredicted RBP19.59■□□□□ 0.73
SCAF11-203ENST00000395453 PARD3Q8TEW0 1356 aa19.59■□□□□ 0.73
SCAF11-203ENST00000395453 TRIM37O94972 964 aa19.59■□□□□ 0.73
SCAF11-203ENST00000395453 NBPF1Q3BBV0 1214 aa19.59■□□□□ 0.73
SCAF11-203ENST00000395453 PRDM11Q9NQV5 511 aa19.59■□□□□ 0.73
SCAF11-203ENST00000395453 ALS2Q96Q42 1657 aa19.58■□□□□ 0.72
SCAF11-203ENST00000395453 APBA3O96018 575 aa19.57■□□□□ 0.72
SCAF11-203ENST00000395453 SPATA31A1Q5TZJ5 1347 aa19.57■□□□□ 0.72
SCAF11-203ENST00000395453 NUDT16Q96DE0 195 aaKnown RBP19.56■□□□□ 0.72
SCAF11-203ENST00000395453 L3MBTL2Q969R5 705 aa19.55■□□□□ 0.72
SCAF11-203ENST00000395453 ATP7BP35670 1465 aa19.55■□□□□ 0.72
SCAF11-203ENST00000395453 PAK3O75914 559 aaPredicted RBP19.54■□□□□ 0.72
SCAF11-203ENST00000395453 NGDNQ8NEJ9 315 aaKnown RBP19.54■□□□□ 0.72
SCAF11-203ENST00000395453 CDK19Q9BWU1 502 aa19.54■□□□□ 0.72
SCAF11-203ENST00000395453 NBPF8Q3BBV2 869 aa19.53■□□□□ 0.72
SCAF11-203ENST00000395453 NBPF14Q5TI25 921 aa19.53■□□□□ 0.72
SCAF11-203ENST00000395453 SIN3AQ96ST3 1273 aa19.53■□□□□ 0.72
SCAF11-203ENST00000395453 STRN4Q9NRL3 753 aa19.52■□□□□ 0.72
SCAF11-203ENST00000395453 ITSN1Q15811 1721 aa19.52■□□□□ 0.71
SCAF11-203ENST00000395453 KIAA0232Q92628 1395 aa19.51■□□□□ 0.71
SCAF11-203ENST00000395453 PDE3BQ13370 1112 aa19.51■□□□□ 0.71
SCAF11-203ENST00000395453 CRYBG1Q9Y4K1 1723 aa19.5■□□□□ 0.71
SCAF11-203ENST00000395453 CHRNA2Q15822 529 aa19.5■□□□□ 0.71
SCAF11-203ENST00000395453 PPP1R1BQ9UD71 204 aaPredicted RBP19.5■□□□□ 0.71
SCAF11-203ENST00000395453 CCDC61Q9Y6R9 512 aa19.5■□□□□ 0.71
SCAF11-203ENST00000395453 POLR3AO14802 1390 aaPredicted RBP19.49■□□□□ 0.71
SCAF11-203ENST00000395453 PLEKHG3A1L390 1219 aa19.49■□□□□ 0.71
SCAF11-203ENST00000395453 BARGINQ6ZT62 677 aa19.49■□□□□ 0.71
SCAF11-203ENST00000395453 SPON1Q9HCB6 807 aa19.49■□□□□ 0.71
SCAF11-203ENST00000395453 EVA1CP58658 441 aa19.48■□□□□ 0.71
SCAF11-203ENST00000395453 USP35Q9P2H5 1018 aa19.48■□□□□ 0.71
SCAF11-203ENST00000395453 CENPJQ9HC77 1338 aaPredicted RBP19.47■□□□□ 0.71
SCAF11-203ENST00000395453 TOPAZ1Q8N9V7 1692 aa19.47■□□□□ 0.71
SCAF11-203ENST00000395453 RREB1Q92766 1687 aa19.47■□□□□ 0.71
SCAF11-203ENST00000395453 KCNA4P22459 653 aa19.47■□□□□ 0.71
SCAF11-203ENST00000395453 ZC3H6P61129 1189 aaKnown RBP19.47■□□□□ 0.71
SCAF11-203ENST00000395453 NEUROD1Q13562 356 aa19.46■□□□□ 0.71
SCAF11-203ENST00000395453 ACEP12821 1306 aa19.45■□□□□ 0.7
SCAF11-203ENST00000395453 KCNQ2O43526 872 aa19.45■□□□□ 0.7
SCAF11-203ENST00000395453 NUP188Q5SRE5 1749 aa19.45■□□□□ 0.7
SCAF11-203ENST00000395453 NINLQ9Y2I6 1382 aa19.44■□□□□ 0.7
SCAF11-203ENST00000395453 TRPM1Q7Z4N2 1603 aa19.44■□□□□ 0.7
SCAF11-203ENST00000395453 CAPN15O75808 1086 aa19.44■□□□□ 0.7
SCAF11-203ENST00000395453 DSG3P32926 999 aa19.44■□□□□ 0.7
SCAF11-203ENST00000395453 SSH2Q76I76 1423 aa19.43■□□□□ 0.7
SCAF11-203ENST00000395453 TCP11L2Q8N4U5 519 aa19.43■□□□□ 0.7
SCAF11-203ENST00000395453 SPINK5Q9NQ38 1064 aaPredicted RBP19.43■□□□□ 0.7
SCAF11-203ENST00000395453 C11orf95C9JLR9 678 aaPredicted RBP19.42■□□□□ 0.7
SCAF11-203ENST00000395453 PHRF1Q9P1Y6 1649 aaKnown RBP19.41■□□□□ 0.7
SCAF11-203ENST00000395453 QRICH2Q9H0J4 1663 aa19.41■□□□□ 0.7
SCAF11-203ENST00000395453 SRPK2P78362 688 aaKnown RBP19.41■□□□□ 0.7
SCAF11-203ENST00000395453 THRAP3Q9Y2W1 955 aaKnown RBP19.41■□□□□ 0.7
SCAF11-203ENST00000395453 NUTM2GQ5VZR2 741 aa19.4■□□□□ 0.7
SCAF11-203ENST00000395453 LARP1Q6PKG0 1096 aaKnown RBP19.4■□□□□ 0.7
SCAF11-203ENST00000395453 CABP2Q9NPB3 220 aa19.4■□□□□ 0.7
SCAF11-203ENST00000395453 PPIP5K1Q6PFW1 1433 aa19.38■□□□□ 0.69
SCAF11-203ENST00000395453 ROCK2O75116 1388 aaKnown RBP19.37■□□□□ 0.69
SCAF11-203ENST00000395453 CAMTA1Q9Y6Y1 1673 aa19.37■□□□□ 0.69
SCAF11-203ENST00000395453 CPDO75976 1380 aa19.36■□□□□ 0.69
SCAF11-203ENST00000395453 BRD4O60885 1362 aaPredicted RBP19.35■□□□□ 0.69
SCAF11-203ENST00000395453 ABTB2Q8N961 1025 aa19.35■□□□□ 0.69
SCAF11-203ENST00000395453 CABP1Q9NZU7 370 aa19.35■□□□□ 0.69
SCAF11-203ENST00000395453 EVC2Q86UK5 1308 aa19.34■□□□□ 0.69
SCAF11-203ENST00000395453 PLSCR1O15162 318 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms