RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 CDK12Q9NYV4 1490 aaPredicted RBP13.58□□□□□ -0.23
HIF1A-203ENST00000394997 APAF1O14727 1248 aa13.58□□□□□ -0.24
HIF1A-203ENST00000394997 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.58□□□□□ -0.24
HIF1A-203ENST00000394997 CRYBG1Q9Y4K1 1723 aa13.58□□□□□ -0.24
HIF1A-203ENST00000394997 EVC2Q86UK5 1308 aa13.58□□□□□ -0.24
HIF1A-203ENST00000394997 ATAD2Q6PL18 1390 aa13.57□□□□□ -0.24
HIF1A-203ENST00000394997 ZBTB47Q9UFB7 747 aaPredicted RBP13.57□□□□□ -0.24
HIF1A-203ENST00000394997 OVOS2A0A0J9YW53 1432 aa13.56□□□□□ -0.24
HIF1A-203ENST00000394997 OVOS2Q6IE36 1432 aa13.56□□□□□ -0.24
HIF1A-203ENST00000394997 SIRT1Q96EB6 747 aa13.56□□□□□ -0.24
HIF1A-203ENST00000394997 TRIM35Q9UPQ4 493 aa13.56□□□□□ -0.24
HIF1A-203ENST00000394997 ROBO2Q9HCK4 1378 aa13.55□□□□□ -0.24
HIF1A-203ENST00000394997 GOLGA2Q08379 1002 aa13.55□□□□□ -0.24
HIF1A-203ENST00000394997 TMEM2Q9UHN6 1383 aa13.55□□□□□ -0.24
HIF1A-203ENST00000394997 PRAM1Q96QH2 718 aa13.55□□□□□ -0.24
HIF1A-203ENST00000394997 SALL2Q9Y467 1007 aaPredicted RBP13.55□□□□□ -0.24
HIF1A-203ENST00000394997 PRR36Q9H6K5 1346 aa13.54□□□□□ -0.24
HIF1A-203ENST00000394997 MTHFSP49914 203 aa13.54□□□□□ -0.24
HIF1A-203ENST00000394997 EDC4Q6P2E9 1401 aaKnown RBP13.54□□□□□ -0.24
HIF1A-203ENST00000394997 CAMTA1Q9Y6Y1 1673 aa13.54□□□□□ -0.24
HIF1A-203ENST00000394997 CGNL1Q0VF96 1302 aa13.53□□□□□ -0.24
HIF1A-203ENST00000394997 BCAR3O75815 825 aa13.53□□□□□ -0.24
HIF1A-203ENST00000394997 NOP58Q9Y2X3 529 aaKnown RBP13.53□□□□□ -0.24
HIF1A-203ENST00000394997 AATKQ6ZMQ8 1374 aa13.53□□□□□ -0.24
HIF1A-203ENST00000394997 NGEFQ8N5V2 710 aa13.53□□□□□ -0.24
HIF1A-203ENST00000394997 PLEKHG1Q9ULL1 1385 aa13.52□□□□□ -0.24
HIF1A-203ENST00000394997 PTCH1Q13635 1447 aa13.52□□□□□ -0.24
HIF1A-203ENST00000394997 ANO8Q9HCE9 1232 aaPredicted RBP13.52□□□□□ -0.24
HIF1A-203ENST00000394997 LTN1O94822 1766 aa13.51□□□□□ -0.25
HIF1A-203ENST00000394997 BACH2Q9BYV9 841 aa13.51□□□□□ -0.25
HIF1A-203ENST00000394997 FAM208AQ9UK61 1670 aaKnown RBP13.51□□□□□ -0.25
HIF1A-203ENST00000394997 E9PSI1 815 aa13.5□□□□□ -0.25
HIF1A-203ENST00000394997 RUNDC1Q96C34 613 aa13.5□□□□□ -0.25
HIF1A-203ENST00000394997 TRPM3Q9HCF6 1732 aaPredicted RBP13.5□□□□□ -0.25
HIF1A-203ENST00000394997 CEP170BQ9Y4F5 1589 aaPredicted RBP13.5□□□□□ -0.25
HIF1A-203ENST00000394997 TNNQ9UQP3 1299 aa13.49□□□□□ -0.25
HIF1A-203ENST00000394997 RGPD2P0DJD1 1756 aa13.49□□□□□ -0.25
HIF1A-203ENST00000394997 CDK19Q9BWU1 502 aa13.49□□□□□ -0.25
HIF1A-203ENST00000394997 LAS1LQ9Y4W2 734 aaKnown RBP13.49□□□□□ -0.25
HIF1A-203ENST00000394997 TNRQ92752 1358 aa13.49□□□□□ -0.25
HIF1A-203ENST00000394997 USP19O94966 1318 aa13.49□□□□□ -0.25
HIF1A-203ENST00000394997 PAK3O75914 559 aaPredicted RBP13.49□□□□□ -0.25
HIF1A-203ENST00000394997 WAPLQ7Z5K2 1190 aa13.49□□□□□ -0.25
HIF1A-203ENST00000394997 RLBP1P12271 317 aa13.48□□□□□ -0.25
HIF1A-203ENST00000394997 C8orf34Q49A92 452 aa13.48□□□□□ -0.25
HIF1A-203ENST00000394997 WDR63Q8IWG1 891 aa13.48□□□□□ -0.25
HIF1A-203ENST00000394997 TCP11L2Q8N4U5 519 aa13.48□□□□□ -0.25
HIF1A-203ENST00000394997 CHGAP10645 457 aaKnown RBP13.48□□□□□ -0.25
HIF1A-203ENST00000394997 RARSP54136 660 aaKnown RBP13.48□□□□□ -0.25
HIF1A-203ENST00000394997 SIPA1L3O60292 1781 aaPredicted RBP13.48□□□□□ -0.25
HIF1A-203ENST00000394997 USP31Q70CQ4 1352 aa13.47□□□□□ -0.25
HIF1A-203ENST00000394997 IGHDP01880 384 aa13.47□□□□□ -0.25
HIF1A-203ENST00000394997 ADAMTS7Q9UKP4 1686 aa13.47□□□□□ -0.25
HIF1A-203ENST00000394997 WDR43Q15061 677 aaKnown RBP eCLIP13.47□□□□□ -0.25
HIF1A-203ENST00000394997 STRCP1A6NGW2 1772 aa13.47□□□□□ -0.25
HIF1A-203ENST00000394997 MS4A1P11836 297 aa13.46□□□□□ -0.25
HIF1A-203ENST00000394997 LTKP29376 864 aa13.46□□□□□ -0.25
HIF1A-203ENST00000394997 MED1Q15648 1581 aaPredicted RBP13.46□□□□□ -0.25
HIF1A-203ENST00000394997 RSPH6AQ9H0K4 717 aa13.46□□□□□ -0.26
HIF1A-203ENST00000394997 POLKQ9UBT6 870 aa13.46□□□□□ -0.26
HIF1A-203ENST00000394997 MORC1Q86VD1 984 aa13.45□□□□□ -0.26
HIF1A-203ENST00000394997 LMO7Q8WWI1 1683 aa13.45□□□□□ -0.26
HIF1A-203ENST00000394997 MINK1Q8N4C8 1332 aaPredicted RBP13.45□□□□□ -0.26
HIF1A-203ENST00000394997 NCKAP5LQ9HCH0 1330 aa13.45□□□□□ -0.26
HIF1A-203ENST00000394997 PIK3R4Q99570 1358 aa13.45□□□□□ -0.26
HIF1A-203ENST00000394997 RGS12O14924 1447 aa13.44□□□□□ -0.26
HIF1A-203ENST00000394997 CABP1Q9NZU7 370 aa13.44□□□□□ -0.26
HIF1A-203ENST00000394997 KDM3BQ7LBC6 1761 aa13.44□□□□□ -0.26
HIF1A-203ENST00000394997 GGNBP2Q9H3C7 697 aa13.43□□□□□ -0.26
HIF1A-203ENST00000394997 USP6P35125 1406 aa13.43□□□□□ -0.26
HIF1A-203ENST00000394997 NFAT5O94916 1531 aa13.43□□□□□ -0.26
HIF1A-203ENST00000394997 WASLO00401 505 aaPredicted RBP13.43□□□□□ -0.26
HIF1A-203ENST00000394997 TCERG1O14776 1098 aaKnown RBP13.43□□□□□ -0.26
HIF1A-203ENST00000394997 FBLN1P23142 703 aa13.43□□□□□ -0.26
HIF1A-203ENST00000394997 IL13P35225 146 aa13.43□□□□□ -0.26
HIF1A-203ENST00000394997 PDE3AQ14432 1141 aa13.42□□□□□ -0.26
HIF1A-203ENST00000394997 XIRP1Q702N8 1843 aaKnown RBP13.42□□□□□ -0.26
HIF1A-203ENST00000394997 ZNF853P0CG23 659 aa13.41□□□□□ -0.26
HIF1A-203ENST00000394997 PDE4AP27815 886 aa13.41□□□□□ -0.26
HIF1A-203ENST00000394997 STK26Q9P289 416 aa13.41□□□□□ -0.26
HIF1A-203ENST00000394997 IL16Q14005 1332 aa13.41□□□□□ -0.26
HIF1A-203ENST00000394997 ZRANB1Q9UGI0 708 aa13.41□□□□□ -0.26
HIF1A-203ENST00000394997 BRPF1P55201 1214 aaPredicted RBP13.4□□□□□ -0.26
HIF1A-203ENST00000394997 SAFB2Q14151 953 aaKnown RBP eCLIP13.4□□□□□ -0.26
HIF1A-203ENST00000394997 TMPOP42166 694 aaKnown RBP13.4□□□□□ -0.26
HIF1A-203ENST00000394997 RRP7AQ9Y3A4 280 aaKnown RBP13.4□□□□□ -0.26
HIF1A-203ENST00000394997 NEFMP07197 916 aa13.39□□□□□ -0.27
HIF1A-203ENST00000394997 ALS2Q96Q42 1657 aa13.39□□□□□ -0.27
HIF1A-203ENST00000394997 PCDHB15Q9Y5E8 787 aa13.39□□□□□ -0.27
HIF1A-203ENST00000394997 CENPQQ7L2Z9 268 aaPredicted RBP13.38□□□□□ -0.27
HIF1A-203ENST00000394997 ARXQ96QS3 562 aa13.38□□□□□ -0.27
HIF1A-203ENST00000394997 TNNT2P45379 298 aaPredicted RBP13.37□□□□□ -0.27
HIF1A-203ENST00000394997 PHACTR3Q96KR7 559 aa13.37□□□□□ -0.27
HIF1A-203ENST00000394997 RGPD5Q99666 1765 aa13.36□□□□□ -0.27
HIF1A-203ENST00000394997 CACNA1FO60840 1977 aa13.36□□□□□ -0.27
HIF1A-203ENST00000394997 NCAPD2Q15021 1401 aa13.36□□□□□ -0.27
HIF1A-203ENST00000394997 PLEKHG3A1L390 1219 aa13.35□□□□□ -0.27
HIF1A-203ENST00000394997 PANK1Q8TE04 598 aa13.35□□□□□ -0.27
HIF1A-203ENST00000394997 IPO9Q96P70 1041 aaKnown RBP13.35□□□□□ -0.27
HIF1A-203ENST00000394997 CRB1P82279 1406 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms