RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 EN1Q05925 392 aaPredicted RBP23.54■■□□□ 1.36
SNCA-205ENST00000394991 FAM182BQ5T319 152 aa23.54■■□□□ 1.36
SNCA-205ENST00000394991 ACIN1Q9UKV3 1341 aaKnown RBP23.54■■□□□ 1.36
SNCA-205ENST00000394991 HIRIP3Q9BW71 556 aaPredicted RBP23.53■■□□□ 1.36
SNCA-205ENST00000394991 SPATA31A5Q5VU36 1347 aa23.53■■□□□ 1.36
SNCA-205ENST00000394991 SPATA31A7Q8IWB4 1347 aa23.53■■□□□ 1.36
SNCA-205ENST00000394991 DISP2A7MBM2 1401 aa23.52■■□□□ 1.36
SNCA-205ENST00000394991 GPRASP1Q5JY77 1395 aa23.52■■□□□ 1.36
SNCA-205ENST00000394991 PHRF1Q9P1Y6 1649 aaKnown RBP23.51■■□□□ 1.35
SNCA-205ENST00000394991 MINK1Q8N4C8 1332 aaPredicted RBP23.51■■□□□ 1.35
SNCA-205ENST00000394991 ITSN1Q15811 1721 aa23.5■■□□□ 1.35
SNCA-205ENST00000394991 TRAK1Q9UPV9 953 aa23.5■■□□□ 1.35
SNCA-205ENST00000394991 EIF3AQ14152 1382 aaKnown RBP23.49■■□□□ 1.35
SNCA-205ENST00000394991 ARHGEF28Q8N1W1 1705 aaKnown RBP23.48■■□□□ 1.35
SNCA-205ENST00000394991 R3HDM1Q15032 1099 aaKnown RBP23.47■■□□□ 1.35
SNCA-205ENST00000394991 WASLO00401 505 aaPredicted RBP23.45■■□□□ 1.34
SNCA-205ENST00000394991 ATP7BP35670 1465 aa23.44■■□□□ 1.34
SNCA-205ENST00000394991 PRDM11Q9NQV5 511 aa23.44■■□□□ 1.34
SNCA-205ENST00000394991 RREB1Q92766 1687 aa23.44■■□□□ 1.34
SNCA-205ENST00000394991 EZH2Q15910 746 aaKnown RBP23.43■■□□□ 1.34
SNCA-205ENST00000394991 KIAA0232Q92628 1395 aa23.42■■□□□ 1.34
SNCA-205ENST00000394991 SPATA31A1Q5TZJ5 1347 aa23.42■■□□□ 1.34
SNCA-205ENST00000394991 PAK3O75914 559 aaPredicted RBP23.42■■□□□ 1.34
SNCA-205ENST00000394991 NGDNQ8NEJ9 315 aaKnown RBP23.42■■□□□ 1.34
SNCA-205ENST00000394991 NUP188Q5SRE5 1749 aa23.42■■□□□ 1.34
SNCA-205ENST00000394991 TOPAZ1Q8N9V7 1692 aa23.41■■□□□ 1.34
SNCA-205ENST00000394991 CHRNA2Q15822 529 aa23.39■■□□□ 1.33
SNCA-205ENST00000394991 CAMKK2Q96RR4 588 aa23.39■■□□□ 1.33
SNCA-205ENST00000394991 TRIM37O94972 964 aa23.38■■□□□ 1.33
SNCA-205ENST00000394991 NRKQ7Z2Y5 1582 aa23.37■■□□□ 1.33
SNCA-205ENST00000394991 KDM2AQ9Y2K7 1162 aa23.37■■□□□ 1.33
SNCA-205ENST00000394991 STRN4Q9NRL3 753 aa23.36■■□□□ 1.33
SNCA-205ENST00000394991 RAB3GAP2Q9H2M9 1393 aa23.36■■□□□ 1.33
SNCA-205ENST00000394991 LMO7Q8WWI1 1683 aa23.35■■□□□ 1.33
SNCA-205ENST00000394991 FAM196AQ6ZSG2 479 aa23.35■■□□□ 1.33
SNCA-205ENST00000394991 ZC3H6P61129 1189 aaKnown RBP23.34■■□□□ 1.33
SNCA-205ENST00000394991 DCAF11Q8TEB1 546 aa23.34■■□□□ 1.33
SNCA-205ENST00000394991 NUDT16Q96DE0 195 aaKnown RBP23.34■■□□□ 1.33
SNCA-205ENST00000394991 SSH2Q76I76 1423 aa23.33■■□□□ 1.33
SNCA-205ENST00000394991 CAMTA1Q9Y6Y1 1673 aa23.33■■□□□ 1.33
SNCA-205ENST00000394991 PARD3Q8TEW0 1356 aa23.33■■□□□ 1.33
SNCA-205ENST00000394991 NUTM2GQ5VZR2 741 aa23.33■■□□□ 1.33
SNCA-205ENST00000394991 APBA3O96018 575 aa23.31■■□□□ 1.32
SNCA-205ENST00000394991 POLR3AO14802 1390 aaPredicted RBP23.3■■□□□ 1.32
SNCA-205ENST00000394991 USP35Q9P2H5 1018 aa23.3■■□□□ 1.32
SNCA-205ENST00000394991 PARP4Q9UKK3 1724 aaKnown RBP23.3■■□□□ 1.32
SNCA-205ENST00000394991 BARGINQ6ZT62 677 aa23.29■■□□□ 1.32
SNCA-205ENST00000394991 ACEP12821 1306 aa23.27■■□□□ 1.32
SNCA-205ENST00000394991 LARP1Q6PKG0 1096 aaKnown RBP23.26■■□□□ 1.31
SNCA-205ENST00000394991 CDK19Q9BWU1 502 aa23.26■■□□□ 1.31
SNCA-205ENST00000394991 SBF2Q86WG5 1849 aa23.25■■□□□ 1.31
SNCA-205ENST00000394991 CPDO75976 1380 aa23.25■■□□□ 1.31
SNCA-205ENST00000394991 PEAK1Q9H792 1746 aa23.25■■□□□ 1.31
SNCA-205ENST00000394991 KIAA1210Q9ULL0 1709 aa23.25■■□□□ 1.31
SNCA-205ENST00000394991 EVA1CP58658 441 aa23.24■■□□□ 1.31
SNCA-205ENST00000394991 PDE3BQ13370 1112 aa23.24■■□□□ 1.31
SNCA-205ENST00000394991 NBPF8Q3BBV2 869 aa23.24■■□□□ 1.31
SNCA-205ENST00000394991 STAC3Q96MF2 364 aa23.24■■□□□ 1.31
SNCA-205ENST00000394991 USP19O94966 1318 aa23.24■■□□□ 1.31
SNCA-205ENST00000394991 TCP11L2Q8N4U5 519 aa23.22■■□□□ 1.31
SNCA-205ENST00000394991 RGPD3A6NKT7 1758 aaPredicted RBP23.22■■□□□ 1.31
SNCA-205ENST00000394991 RGPD4Q7Z3J3 1758 aa23.22■■□□□ 1.31
SNCA-205ENST00000394991 PLEKHG3A1L390 1219 aa23.21■■□□□ 1.31
SNCA-205ENST00000394991 CCDC61Q9Y6R9 512 aa23.21■■□□□ 1.31
SNCA-205ENST00000394991 COL5A2P05997 1499 aaPredicted RBP23.21■■□□□ 1.31
SNCA-205ENST00000394991 WNK3Q9BYP7 1800 aa23.2■■□□□ 1.3
SNCA-205ENST00000394991 LRRC37A3O60309 1634 aa23.2■■□□□ 1.3
SNCA-205ENST00000394991 ABTB2Q8N961 1025 aa23.19■■□□□ 1.3
SNCA-205ENST00000394991 NBPF14Q5TI25 921 aa23.18■■□□□ 1.3
SNCA-205ENST00000394991 CASZ1Q86V15 1759 aa23.17■■□□□ 1.3
SNCA-205ENST00000394991 YY1P25490 414 aa23.16■■□□□ 1.3
SNCA-205ENST00000394991 THRAP3Q9Y2W1 955 aaKnown RBP23.16■■□□□ 1.3
SNCA-205ENST00000394991 COL18A1P39060 1754 aa23.15■■□□□ 1.3
SNCA-205ENST00000394991 PPIP5K1Q6PFW1 1433 aa23.15■■□□□ 1.3
SNCA-205ENST00000394991 GCP02774 474 aa23.14■■□□□ 1.29
SNCA-205ENST00000394991 CRB1P82279 1406 aa23.14■■□□□ 1.29
SNCA-205ENST00000394991 QRICH2Q9H0J4 1663 aa23.13■■□□□ 1.29
SNCA-205ENST00000394991 SPON1Q9HCB6 807 aa23.13■■□□□ 1.29
SNCA-205ENST00000394991 OVOS2A0A0G2JMS6 1433 aa23.13■■□□□ 1.29
SNCA-205ENST00000394991 OVOS2A0A0J9YW53 1432 aa23.13■■□□□ 1.29
SNCA-205ENST00000394991 OVOS2Q6IE36 1432 aa23.13■■□□□ 1.29
SNCA-205ENST00000394991 SLIT3O75094 1523 aa23.13■■□□□ 1.29
SNCA-205ENST00000394991 NLRP13Q86W25 1043 aa23.12■■□□□ 1.29
SNCA-205ENST00000394991 AKAP12Q02952 1782 aa23.12■■□□□ 1.29
SNCA-205ENST00000394991 KCNQ2O43526 872 aa23.11■■□□□ 1.29
SNCA-205ENST00000394991 NINLQ9Y2I6 1382 aa23.11■■□□□ 1.29
SNCA-205ENST00000394991 PIK3C2AO00443 1686 aa23.1■■□□□ 1.29
SNCA-205ENST00000394991 RGPD5Q99666 1765 aa23.1■■□□□ 1.29
SNCA-205ENST00000394991 NBPF1Q3BBV0 1214 aa23.1■■□□□ 1.29
SNCA-205ENST00000394991 PPP1R1BQ9UD71 204 aaPredicted RBP23.1■■□□□ 1.29
SNCA-205ENST00000394991 ANO8Q9HCE9 1232 aaPredicted RBP23.08■■□□□ 1.29
SNCA-205ENST00000394991 USP6P35125 1406 aa23.08■■□□□ 1.28
SNCA-205ENST00000394991 BRD4O60885 1362 aaPredicted RBP23.07■■□□□ 1.28
SNCA-205ENST00000394991 AATKQ6ZMQ8 1374 aa23.07■■□□□ 1.28
SNCA-205ENST00000394991 SRPK2P78362 688 aaKnown RBP23.07■■□□□ 1.28
SNCA-205ENST00000394991 PTF1AQ7RTS3 328 aa23.07■■□□□ 1.28
SNCA-205ENST00000394991 CABP2Q9NPB3 220 aa23.07■■□□□ 1.28
SNCA-205ENST00000394991 ZBTB7CA1YPR0 619 aa23.06■■□□□ 1.28
SNCA-205ENST00000394991 C11orf95C9JLR9 678 aaPredicted RBP23.06■■□□□ 1.28
SNCA-205ENST00000394991 MYOM1P52179 1685 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms