RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 GYS2P54840 703 aa14□□□□□ -0.17
LAMB1-203ENST00000393560 TERF2Q15554 542 aa14□□□□□ -0.17
LAMB1-203ENST00000393560 TERF2IPQ9NYB0 399 aa14□□□□□ -0.17
LAMB1-203ENST00000393560 CLASP1Q7Z460 1538 aa13.99□□□□□ -0.17
LAMB1-203ENST00000393560 GUCY2CP25092 1073 aa13.99□□□□□ -0.17
LAMB1-203ENST00000393560 NBPF10Q6P3W6 841 aaKnown RBP13.99□□□□□ -0.17
LAMB1-203ENST00000393560 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.99□□□□□ -0.17
LAMB1-203ENST00000393560 PNISRQ8TF01 805 aaKnown RBP13.99□□□□□ -0.17
LAMB1-203ENST00000393560 FEZ1Q99689 392 aa13.99□□□□□ -0.17
LAMB1-203ENST00000393560 ZNF692Q9BU19 519 aaPredicted RBP13.99□□□□□ -0.17
LAMB1-203ENST00000393560 CT47B1P0C2W7 299 aaPredicted RBP13.99□□□□□ -0.17
LAMB1-203ENST00000393560 ZNF853P0CG23 659 aa13.99□□□□□ -0.17
LAMB1-203ENST00000393560 SRPK2P78362 688 aaKnown RBP13.99□□□□□ -0.17
LAMB1-203ENST00000393560 OTUD6BQ8N6M0 293 aa13.99□□□□□ -0.17
LAMB1-203ENST00000393560 SLC26A8Q96RN1 970 aa13.99□□□□□ -0.17
LAMB1-203ENST00000393560 NINLQ9Y2I6 1382 aa13.99□□□□□ -0.17
LAMB1-203ENST00000393560 SSR1P43307 286 aaKnown RBP13.98□□□□□ -0.17
LAMB1-203ENST00000393560 RAD51AP2Q09MP3 1159 aa13.98□□□□□ -0.17
LAMB1-203ENST00000393560 SUFUQ9UMX1 484 aa13.98□□□□□ -0.17
LAMB1-203ENST00000393560 DDX11L8A8MPP1 907 aa13.97□□□□□ -0.17
LAMB1-203ENST00000393560 RASSF4Q9H2L5 321 aa13.97□□□□□ -0.17
LAMB1-203ENST00000393560 ABCC2Q92887 1545 aa13.97□□□□□ -0.17
LAMB1-203ENST00000393560 ANKRD30AQ9BXX3 1397 aa13.97□□□□□ -0.17
LAMB1-203ENST00000393560 BIRC2Q13490 618 aa13.97□□□□□ -0.17
LAMB1-203ENST00000393560 RBM25P49756 843 aaKnown RBP13.96□□□□□ -0.17
LAMB1-203ENST00000393560 NBPF6Q5VWK0 638 aa13.96□□□□□ -0.17
LAMB1-203ENST00000393560 NBPF5PQ86XG9 351 aaPredicted RBP13.96□□□□□ -0.17
LAMB1-203ENST00000393560 NBPF4Q96M43 638 aa13.96□□□□□ -0.17
LAMB1-203ENST00000393560 NOL10Q9BSC4 688 aaKnown RBP13.96□□□□□ -0.17
LAMB1-203ENST00000393560 GTF2F1P35269 517 aaKnown RBP eCLIP13.96□□□□□ -0.17
LAMB1-203ENST00000393560 HMGN5P82970 282 aaKnown RBP13.96□□□□□ -0.17
LAMB1-203ENST00000393560 CTR9Q6PD62 1173 aa13.96□□□□□ -0.17
LAMB1-203ENST00000393560 TNPO1Q92973 898 aaKnown RBP13.96□□□□□ -0.17
LAMB1-203ENST00000393560 PRIMPOLQ96LW4 560 aa13.96□□□□□ -0.17
LAMB1-203ENST00000393560 MPHOSPH10O00566 681 aaKnown RBP13.96□□□□□ -0.18
LAMB1-203ENST00000393560 MAFGO15525 162 aa13.96□□□□□ -0.18
LAMB1-203ENST00000393560 PIK3R5Q8WYR1 880 aa13.96□□□□□ -0.18
LAMB1-203ENST00000393560 USP19O94966 1318 aa13.95□□□□□ -0.18
LAMB1-203ENST00000393560 KTN1Q86UP2 1357 aaKnown RBP13.95□□□□□ -0.18
LAMB1-203ENST00000393560 HNRNPH2P55795 449 aaKnown RBP13.95□□□□□ -0.18
LAMB1-203ENST00000393560 DRC1Q96MC2 740 aa13.95□□□□□ -0.18
LAMB1-203ENST00000393560 KDM2AQ9Y2K7 1162 aa13.95□□□□□ -0.18
LAMB1-203ENST00000393560 C9orf84Q5VXU9 1444 aa13.95□□□□□ -0.18
LAMB1-203ENST00000393560 C20orf194Q5TEA3 1177 aa13.95□□□□□ -0.18
LAMB1-203ENST00000393560 CCDC189A1A4V9 331 aa13.94□□□□□ -0.18
LAMB1-203ENST00000393560 SART3Q15020 963 aaKnown RBP13.94□□□□□ -0.18
LAMB1-203ENST00000393560 BRMS1Q9HCU9 246 aa13.94□□□□□ -0.18
LAMB1-203ENST00000393560 LRCH2Q5VUJ6 765 aa13.93□□□□□ -0.18
LAMB1-203ENST00000393560 CXorf56Q9H5V9 222 aa13.93□□□□□ -0.18
LAMB1-203ENST00000393560 ANKRD50Q9ULJ7 1429 aa13.93□□□□□ -0.18
LAMB1-203ENST00000393560 TTC37Q6PGP7 1564 aa13.93□□□□□ -0.18
LAMB1-203ENST00000393560 MCM5P33992 734 aa13.93□□□□□ -0.18
LAMB1-203ENST00000393560 PKD2Q13563 968 aa13.93□□□□□ -0.18
LAMB1-203ENST00000393560 OSCARQ8IYS5 282 aa13.93□□□□□ -0.18
LAMB1-203ENST00000393560 KIF7Q2M1P5 1343 aa13.93□□□□□ -0.18
LAMB1-203ENST00000393560 ARHGAP5Q13017 1502 aa13.93□□□□□ -0.18
LAMB1-203ENST00000393560 CC2D2BQ6DHV5 1058 aa13.92□□□□□ -0.18
LAMB1-203ENST00000393560 TBC1D2Q9BYX2 928 aa13.92□□□□□ -0.18
LAMB1-203ENST00000393560 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.92□□□□□ -0.18
LAMB1-203ENST00000393560 CHMP5Q9NZZ3 219 aa13.92□□□□□ -0.18
LAMB1-203ENST00000393560 MRVI1Q9Y6F6 885 aa13.92□□□□□ -0.18
LAMB1-203ENST00000393560 CDC42BPBQ9Y5S2 1711 aa13.91□□□□□ -0.18
LAMB1-203ENST00000393560 NUP155O75694 1391 aa13.91□□□□□ -0.18
LAMB1-203ENST00000393560 KIF15Q9NS87 1388 aa13.91□□□□□ -0.18
LAMB1-203ENST00000393560 RCAN3Q9UKA8 241 aa13.91□□□□□ -0.18
LAMB1-203ENST00000393560 MBD5Q9P267 1494 aa13.9□□□□□ -0.18
LAMB1-203ENST00000393560 ANKRD30BQ9BXX2 1392 aa13.9□□□□□ -0.18
LAMB1-203ENST00000393560 SAMD9LQ8IVG5 1584 aa13.9□□□□□ -0.18
LAMB1-203ENST00000393560 KIF1CO43896 1103 aaKnown RBP13.9□□□□□ -0.18
LAMB1-203ENST00000393560 DNAJC14Q6Y2X3 702 aaPredicted RBP13.9□□□□□ -0.18
LAMB1-203ENST00000393560 C10orf67Q8IYJ2 551 aa13.9□□□□□ -0.18
LAMB1-203ENST00000393560 RBM28Q9NW13 759 aaKnown RBP13.9□□□□□ -0.18
LAMB1-203ENST00000393560 ZKSCAN8Q15776 578 aaPredicted RBP13.9□□□□□ -0.18
LAMB1-203ENST00000393560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.9□□□□□ -0.181e-7■□□□□ 10.9
LAMB1-203ENST00000393560 CCDC7Q96M83 1385 aa13.89□□□□□ -0.19
LAMB1-203ENST00000393560 ZCCHC11Q5TAX3 1644 aaKnown RBP13.89□□□□□ -0.19
LAMB1-203ENST00000393560 IPO8O15397 1037 aaKnown RBP13.89□□□□□ -0.19
LAMB1-203ENST00000393560 SEC24BO95487 1268 aa13.89□□□□□ -0.19
LAMB1-203ENST00000393560 PPP2R5AQ15172 486 aa13.89□□□□□ -0.19
LAMB1-203ENST00000393560 ARMCX6Q7L4S7 300 aa13.89□□□□□ -0.19
LAMB1-203ENST00000393560 PZPP20742 1482 aa13.89□□□□□ -0.19
LAMB1-203ENST00000393560 PLIN1O60240 522 aa13.89□□□□□ -0.19
LAMB1-203ENST00000393560 CRBNQ96SW2 442 aa13.89□□□□□ -0.19
LAMB1-203ENST00000393560 ADGRL2O95490 1459 aa13.88□□□□□ -0.19
LAMB1-203ENST00000393560 KIAA2012Q0VF49 1180 aa13.88□□□□□ -0.19
LAMB1-203ENST00000393560 SYCP2Q9BX26 1530 aa13.88□□□□□ -0.19
LAMB1-203ENST00000393560 CROCC2H7BZ55 1655 aa13.88□□□□□ -0.19
LAMB1-203ENST00000393560 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
LAMB1-203ENST00000393560 ANKRD7Q92527 254 aa13.88□□□□□ -0.19
LAMB1-203ENST00000393560 MED4Q9NPJ6 270 aa13.88□□□□□ -0.19
LAMB1-203ENST00000393560 CNTLNQ9NXG0 1405 aa13.88□□□□□ -0.19
LAMB1-203ENST00000393560 CASQ1P31415 396 aa13.87□□□□□ -0.19
LAMB1-203ENST00000393560 CASC1Q6TDU7 716 aa13.87□□□□□ -0.19
LAMB1-203ENST00000393560 JRKLQ9Y4A0 524 aa13.87□□□□□ -0.19
LAMB1-203ENST00000393560 PREX2Q70Z35 1606 aa13.87□□□□□ -0.19
LAMB1-203ENST00000393560 TRIM66O15016 1216 aa13.87□□□□□ -0.19
LAMB1-203ENST00000393560 CCDC141Q6ZP82 1450 aa13.87□□□□□ -0.19
LAMB1-203ENST00000393560 PDLIM2Q96JY6 352 aa13.86□□□□□ -0.19
LAMB1-203ENST00000393560 RBM5P52756 815 aaKnown RBP eCLIP13.86□□□□□ -0.191e-6■■□□□ 13.9
LAMB1-203ENST00000393560 EFCAB2Q5VUJ9 269 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms