RNA–Protein interactions for RNA: ENST00000392900.3

TCAF1-202, Transcript of TRPM8 channel associated factor 1, humanhuman

TSL 2

Gene TCAF1, Length 2,513 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1-202ENST00000392900 U2AF1L5P0DN76 240 aaPredicted RBP16.5■□□□□ 0.23
TCAF1-202ENST00000392900 U2AF1Q01081 240 aaKnown RBP eCLIP16.5■□□□□ 0.23
TCAF1-202ENST00000392900 YTHDC2Q9H6S0 1430 aaKnown RBP16.5■□□□□ 0.23
TCAF1-202ENST00000392900 IQSEC2Q5JU85 1478 aa16.49■□□□□ 0.23
TCAF1-202ENST00000392900 LMTK3Q96Q04 1460 aa16.49■□□□□ 0.23
TCAF1-202ENST00000392900 NGEFQ8N5V2 710 aa16.49■□□□□ 0.23
TCAF1-202ENST00000392900 CANXP27824 592 aaKnown RBP16.49■□□□□ 0.23
TCAF1-202ENST00000392900 HDGFP51858 240 aaKnown RBP16.49■□□□□ 0.23
TCAF1-202ENST00000392900 FRAT1Q92837 279 aaPredicted RBP16.49■□□□□ 0.23
TCAF1-202ENST00000392900 PUS7Q96PZ0 661 aaKnown RBP16.49■□□□□ 0.23
TCAF1-202ENST00000392900 PANK1Q8TE04 598 aa16.48■□□□□ 0.23
TCAF1-202ENST00000392900 PTPRUQ92729 1446 aa16.48■□□□□ 0.23
TCAF1-202ENST00000392900 RGS3P49796 1198 aa16.48■□□□□ 0.23
TCAF1-202ENST00000392900 ANKLE2Q86XL3 938 aa16.48■□□□□ 0.23
TCAF1-202ENST00000392900 BCL2L13Q9BXK5 485 aa16.48■□□□□ 0.23
TCAF1-202ENST00000392900 COG6Q9Y2V7 657 aa16.47■□□□□ 0.23
TCAF1-202ENST00000392900 WAPLQ7Z5K2 1190 aa16.47■□□□□ 0.23
TCAF1-202ENST00000392900 U2SURPO15042 1029 aaKnown RBP16.46■□□□□ 0.23
TCAF1-202ENST00000392900 NSD2O96028 1365 aa16.46■□□□□ 0.23
TCAF1-202ENST00000392900 ABCC11Q96J66 1382 aa16.46■□□□□ 0.23
TCAF1-202ENST00000392900 PKNOX2Q96KN3 472 aa16.46■□□□□ 0.22
TCAF1-202ENST00000392900 TNNQ9UQP3 1299 aa16.45■□□□□ 0.22
TCAF1-202ENST00000392900 PHF23Q9BUL5 403 aaPredicted RBP16.45■□□□□ 0.22
TCAF1-202ENST00000392900 FYB1O15117 783 aa16.44■□□□□ 0.22
TCAF1-202ENST00000392900 IGHDP01880 384 aa16.44■□□□□ 0.22
TCAF1-202ENST00000392900 CDK19Q9BWU1 502 aa16.44■□□□□ 0.22
TCAF1-202ENST00000392900 PLEKHG5O94827 1062 aa16.43■□□□□ 0.22
TCAF1-202ENST00000392900 RARSP54136 660 aaKnown RBP16.43■□□□□ 0.22
TCAF1-202ENST00000392900 CD163L1Q9NR16 1453 aa16.43■□□□□ 0.22
TCAF1-202ENST00000392900 CABP1Q9NZU7 370 aa16.43■□□□□ 0.22
TCAF1-202ENST00000392900 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.43■□□□□ 0.22
TCAF1-202ENST00000392900 ATAD2Q6PL18 1390 aa16.43■□□□□ 0.22
TCAF1-202ENST00000392900 ROBO2Q9HCK4 1378 aa16.43■□□□□ 0.22
TCAF1-202ENST00000392900 WDR63Q8IWG1 891 aa16.42■□□□□ 0.22
TCAF1-202ENST00000392900 TERF2IPQ9NYB0 399 aa16.42■□□□□ 0.22
TCAF1-202ENST00000392900 TBX22Q9Y458 520 aa16.42■□□□□ 0.22
TCAF1-202ENST00000392900 FBLN1P23142 703 aa16.41■□□□□ 0.22
TCAF1-202ENST00000392900 PDE3AQ14432 1141 aa16.41■□□□□ 0.22
TCAF1-202ENST00000392900 NPHP4O75161 1426 aaPredicted RBP16.41■□□□□ 0.22
TCAF1-202ENST00000392900 NINLQ9Y2I6 1382 aa16.41■□□□□ 0.22
TCAF1-202ENST00000392900 STRCQ7RTU9 1775 aa16.4■□□□□ 0.22
TCAF1-202ENST00000392900 RLBP1P12271 317 aa16.4■□□□□ 0.22
TCAF1-202ENST00000392900 TSR2Q969E8 191 aaKnown RBP16.4■□□□□ 0.22
TCAF1-202ENST00000392900 CLUAP1Q96AJ1 413 aa16.4■□□□□ 0.22
TCAF1-202ENST00000392900 CCDC27Q2M243 656 aa16.4■□□□□ 0.22
TCAF1-202ENST00000392900 C8orf34Q49A92 452 aa16.4■□□□□ 0.22
TCAF1-202ENST00000392900 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.4■□□□□ 0.22
TCAF1-202ENST00000392900 AMOTL2Q9Y2J4 779 aa16.4■□□□□ 0.22
TCAF1-202ENST00000392900 RBM33Q96EV2 1170 aaKnown RBP16.39■□□□□ 0.21
TCAF1-202ENST00000392900 LAS1LQ9Y4W2 734 aaKnown RBP16.39■□□□□ 0.21
TCAF1-202ENST00000392900 HDGFL2Q7Z4V5 671 aaPredicted RBP16.38■□□□□ 0.21
TCAF1-202ENST00000392900 KCNA6P17658 529 aa16.38■□□□□ 0.21
TCAF1-202ENST00000392900 FAM161AQ3B820 660 aa16.38■□□□□ 0.21
TCAF1-202ENST00000392900 PLEKHF1Q96S99 279 aa16.38■□□□□ 0.21
TCAF1-202ENST00000392900 TECPR2O15040 1411 aa16.37■□□□□ 0.21
TCAF1-202ENST00000392900 ADGRB2O60241 1585 aa16.37■□□□□ 0.21
TCAF1-202ENST00000392900 KNDC1Q76NI1 1749 aa16.37■□□□□ 0.21
TCAF1-202ENST00000392900 COL3A1P02461 1466 aaPredicted RBP16.37■□□□□ 0.21
TCAF1-202ENST00000392900 PPM1GO15355 546 aaPredicted RBP16.37■□□□□ 0.21
TCAF1-202ENST00000392900 MYH16Q9H6N6 1097 aa16.37■□□□□ 0.21
TCAF1-202ENST00000392900 DLC1Q96QB1 1528 aa16.36■□□□□ 0.21
TCAF1-202ENST00000392900 DIP2AQ14689 1571 aa16.36■□□□□ 0.21
TCAF1-202ENST00000392900 CPS1P31327 1500 aa16.36■□□□□ 0.21
TCAF1-202ENST00000392900 TMPOP42166 694 aaKnown RBP16.36■□□□□ 0.21
TCAF1-202ENST00000392900 XRN1Q8IZH2 1706 aaKnown RBP16.35■□□□□ 0.21
TCAF1-202ENST00000392900 ANKRD26Q9UPS8 1709 aa16.35■□□□□ 0.21
TCAF1-202ENST00000392900 CHD2O14647 1828 aaKnown RBP16.35■□□□□ 0.21
TCAF1-202ENST00000392900 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.35■□□□□ 0.21
TCAF1-202ENST00000392900 MAPK8IP3Q9UPT6 1336 aa16.35■□□□□ 0.21
TCAF1-202ENST00000392900 SLC4A3P48751 1232 aa16.35■□□□□ 0.21
TCAF1-202ENST00000392900 TRIM35Q9UPQ4 493 aa16.35■□□□□ 0.21
TCAF1-202ENST00000392900 PCDHB15Q9Y5E8 787 aa16.34■□□□□ 0.21
TCAF1-202ENST00000392900 DIAPH1O60610 1272 aaKnown RBP16.33■□□□□ 0.2
TCAF1-202ENST00000392900 EXOSC9Q06265 439 aaKnown RBP16.33■□□□□ 0.2
TCAF1-202ENST00000392900 KIF20BQ96Q89 1820 aa16.33■□□□□ 0.2
TCAF1-202ENST00000392900 STRCP1A6NGW2 1772 aa16.32■□□□□ 0.2
TCAF1-202ENST00000392900 RIPK4P57078 832 aa16.32■□□□□ 0.2
TCAF1-202ENST00000392900 FAM135BQ49AJ0 1406 aa16.31■□□□□ 0.2
TCAF1-202ENST00000392900 RTL5Q5HYW3 569 aaPredicted RBP16.3■□□□□ 0.2
TCAF1-202ENST00000392900 SMC4Q9NTJ3 1288 aa16.29■□□□□ 0.2
TCAF1-202ENST00000392900 DDRGK1Q96HY6 314 aa16.29■□□□□ 0.2
TCAF1-202ENST00000392900 POLKQ9UBT6 870 aa16.29■□□□□ 0.2
TCAF1-202ENST00000392900 ZRANB1Q9UGI0 708 aa16.29■□□□□ 0.2
TCAF1-202ENST00000392900 PIK3R4Q99570 1358 aa16.28■□□□□ 0.2
TCAF1-202ENST00000392900 FTSJ3Q8IY81 847 aaKnown RBP16.28■□□□□ 0.2
TCAF1-202ENST00000392900 IL27Q8NEV9 243 aa16.28■□□□□ 0.2
TCAF1-202ENST00000392900 SIRT1Q96EB6 747 aa16.28■□□□□ 0.2
TCAF1-202ENST00000392900 PTCH1Q13635 1447 aa16.28■□□□□ 0.2
TCAF1-202ENST00000392900 PNPLA6Q8IY17 1366 aa16.28■□□□□ 0.2
TCAF1-202ENST00000392900 HMOX1P09601 288 aa16.27■□□□□ 0.2
TCAF1-202ENST00000392900 NCBP3Q53F19 620 aaKnown RBP16.27■□□□□ 0.2
TCAF1-202ENST00000392900 ZKSCAN2Q63HK3 967 aa16.27■□□□□ 0.2
TCAF1-202ENST00000392900 NME9Q86XW9 330 aa16.27■□□□□ 0.2
TCAF1-202ENST00000392900 SSH1Q8WYL5 1049 aa16.27■□□□□ 0.2
TCAF1-202ENST00000392900 MAP2P11137 1827 aaKnown RBP16.27■□□□□ 0.2
TCAF1-202ENST00000392900 NUTM2FA1L443 756 aa16.27■□□□□ 0.2
TCAF1-202ENST00000392900 PRKAR2BP31323 418 aa16.27■□□□□ 0.2
TCAF1-202ENST00000392900 PODXL2Q9NZ53 605 aa16.27■□□□□ 0.2
TCAF1-202ENST00000392900 EMILIN1Q9Y6C2 1016 aa16.27■□□□□ 0.2
TCAF1-202ENST00000392900 WASLO00401 505 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms