RNA–Protein interactions for RNA: ENST00000392859.7

ARCN1-203, Transcript of archain 1, humanhuman

TSL 2 BASIC

Gene ARCN1, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1-203ENST00000392859 TTC21BQ7Z4L5 1316 aa22.3■■□□□ 1.16
ARCN1-203ENST00000392859 ORAI2Q96SN7 254 aa22.29■■□□□ 1.16
ARCN1-203ENST00000392859 SSH2Q76I76 1423 aa22.29■■□□□ 1.16
ARCN1-203ENST00000392859 FBLN1P23142 703 aa22.28■■□□□ 1.16
ARCN1-203ENST00000392859 NCOA3Q9Y6Q9 1424 aa22.27■■□□□ 1.16
ARCN1-203ENST00000392859 C1orf167Q5SNV9 1468 aa22.27■■□□□ 1.16
ARCN1-203ENST00000392859 SENP3-EIF4A1A0A087X0R7 540 aa22.27■■□□□ 1.16
ARCN1-203ENST00000392859 DMRT2Q9Y5R5 561 aa22.27■■□□□ 1.16
ARCN1-203ENST00000392859 MST1RQ04912 1400 aa22.27■■□□□ 1.16
ARCN1-203ENST00000392859 ATF3P18847 181 aa22.26■■□□□ 1.15
ARCN1-203ENST00000392859 HNRNPUQ00839 825 aaKnown RBP eCLIP22.26■■□□□ 1.15
ARCN1-203ENST00000392859 PIK3C2AO00443 1686 aa22.25■■□□□ 1.15
ARCN1-203ENST00000392859 MTHFSP49914 203 aa22.25■■□□□ 1.15
ARCN1-203ENST00000392859 MSH6P52701 1360 aa22.25■■□□□ 1.15
ARCN1-203ENST00000392859 DCCP43146 1447 aa22.24■■□□□ 1.15
ARCN1-203ENST00000392859 MAP2P11137 1827 aaKnown RBP22.22■■□□□ 1.15
ARCN1-203ENST00000392859 XPCQ01831 940 aaPredicted RBP22.22■■□□□ 1.15
ARCN1-203ENST00000392859 COG3Q96JB2 828 aa22.22■■□□□ 1.15
ARCN1-203ENST00000392859 SHPRHQ149N8 1683 aa22.21■■□□□ 1.15
ARCN1-203ENST00000392859 CENPBP07199 599 aaPredicted RBP22.21■■□□□ 1.15
ARCN1-203ENST00000392859 OVOS2A0A0J9YW53 1432 aa22.21■■□□□ 1.15
ARCN1-203ENST00000392859 OVOS2Q6IE36 1432 aa22.21■■□□□ 1.15
ARCN1-203ENST00000392859 FOXO3O43524 673 aa22.2■■□□□ 1.14
ARCN1-203ENST00000392859 KIF1AQ12756 1690 aa22.2■■□□□ 1.14
ARCN1-203ENST00000392859 MARF1Q9Y4F3 1742 aaKnown RBP22.2■■□□□ 1.14
ARCN1-203ENST00000392859 PAK3O75914 559 aaPredicted RBP22.2■■□□□ 1.14
ARCN1-203ENST00000392859 NUTM2GQ5VZR2 741 aa22.2■■□□□ 1.14
ARCN1-203ENST00000392859 TTC21AQ8NDW8 1320 aa22.19■■□□□ 1.14
ARCN1-203ENST00000392859 CADPS2Q86UW7 1296 aa22.19■■□□□ 1.14
ARCN1-203ENST00000392859 PSME1Q06323 249 aa22.18■■□□□ 1.14
ARCN1-203ENST00000392859 DDX17Q92841 729 aaKnown RBP22.17■■□□□ 1.14
ARCN1-203ENST00000392859 ADAMTS8Q9UP79 889 aa22.17■■□□□ 1.14
ARCN1-203ENST00000392859 SOX12O15370 315 aa22.17■■□□□ 1.14
ARCN1-203ENST00000392859 WDR43Q15061 677 aaKnown RBP eCLIP22.16■■□□□ 1.14
ARCN1-203ENST00000392859 TRPM3Q9HCF6 1732 aaPredicted RBP22.15■■□□□ 1.14
ARCN1-203ENST00000392859 PPM1GO15355 546 aaPredicted RBP22.15■■□□□ 1.14
ARCN1-203ENST00000392859 RRS1Q15050 365 aaKnown RBP22.15■■□□□ 1.14
ARCN1-203ENST00000392859 POLKQ9UBT6 870 aa22.15■■□□□ 1.14
ARCN1-203ENST00000392859 EMILIN1Q9Y6C2 1016 aa22.15■■□□□ 1.14
ARCN1-203ENST00000392859 COL3A1P02461 1466 aaPredicted RBP22.14■■□□□ 1.14
ARCN1-203ENST00000392859 SCAF1Q9H7N4 1312 aaKnown RBP22.14■■□□□ 1.13
ARCN1-203ENST00000392859 LTBP4Q8N2S1 1624 aa22.13■■□□□ 1.13
ARCN1-203ENST00000392859 NLRP6P59044 892 aa22.13■■□□□ 1.13
ARCN1-203ENST00000392859 ABTB2Q8N961 1025 aa22.13■■□□□ 1.13
ARCN1-203ENST00000392859 CFAP53Q96M91 514 aa22.13■■□□□ 1.13
ARCN1-203ENST00000392859 BLMP54132 1417 aaPredicted RBP22.13■■□□□ 1.13
ARCN1-203ENST00000392859 USP31Q70CQ4 1352 aa22.12■■□□□ 1.13
ARCN1-203ENST00000392859 USP54Q70EL1 1684 aa22.12■■□□□ 1.13
ARCN1-203ENST00000392859 AATKQ6ZMQ8 1374 aa22.11■■□□□ 1.13
ARCN1-203ENST00000392859 PEAK1Q9H792 1746 aa22.1■■□□□ 1.13
ARCN1-203ENST00000392859 KRT28Q7Z3Y7 464 aa22.1■■□□□ 1.13
ARCN1-203ENST00000392859 SMG6Q86US8 1419 aaKnown RBP22.09■■□□□ 1.13
ARCN1-203ENST00000392859 PLEKHG5O94827 1062 aa22.09■■□□□ 1.13
ARCN1-203ENST00000392859 CCDC146Q8IYE0 955 aa22.09■■□□□ 1.13
ARCN1-203ENST00000392859 AEBP2Q6ZN18 517 aaPredicted RBP22.09■■□□□ 1.13
ARCN1-203ENST00000392859 BRINP3Q76B58 766 aa22.09■■□□□ 1.13
ARCN1-203ENST00000392859 SLAIN2Q9P270 581 aa22.08■■□□□ 1.12
ARCN1-203ENST00000392859 PNPLA6Q8IY17 1366 aa22.08■■□□□ 1.12
ARCN1-203ENST00000392859 SALL2Q9Y467 1007 aaPredicted RBP22.07■■□□□ 1.12
ARCN1-203ENST00000392859 CDK12Q9NYV4 1490 aaPredicted RBP22.07■■□□□ 1.12
ARCN1-203ENST00000392859 LMOD2Q6P5Q4 547 aa22.06■■□□□ 1.12
ARCN1-203ENST00000392859 ZBED9Q6R2W3 1325 aa22.06■■□□□ 1.12
ARCN1-203ENST00000392859 ALS2Q96Q42 1657 aa22.05■■□□□ 1.12
ARCN1-203ENST00000392859 PXDNQ92626 1479 aa22.04■■□□□ 1.12
ARCN1-203ENST00000392859 INSRP06213 1382 aa22.03■■□□□ 1.12
ARCN1-203ENST00000392859 MAP3K19Q56UN5 1328 aa22.03■■□□□ 1.12
ARCN1-203ENST00000392859 U2SURPO15042 1029 aaKnown RBP22.03■■□□□ 1.12
ARCN1-203ENST00000392859 NPHP3Q7Z494 1330 aa22.03■■□□□ 1.12
ARCN1-203ENST00000392859 DIAPH1O60610 1272 aaKnown RBP22.03■■□□□ 1.12
ARCN1-203ENST00000392859 U2AF1L5P0DN76 240 aaPredicted RBP22.03■■□□□ 1.12
ARCN1-203ENST00000392859 U2AF1Q01081 240 aaKnown RBP eCLIP22.03■■□□□ 1.12
ARCN1-203ENST00000392859 LTN1O94822 1766 aa22.01■■□□□ 1.11
ARCN1-203ENST00000392859 NFAT5O94916 1531 aa22.01■■□□□ 1.11
ARCN1-203ENST00000392859 HSP90AB2PQ58FF8 381 aa21.98■■□□□ 1.11
ARCN1-203ENST00000392859 NUDCQ9Y266 331 aa21.98■■□□□ 1.11
ARCN1-203ENST00000392859 SLIT3O75094 1523 aa21.97■■□□□ 1.11
ARCN1-203ENST00000392859 IL13P35225 146 aa21.97■■□□□ 1.11
ARCN1-203ENST00000392859 SBNO1A3KN83 1393 aa21.97■■□□□ 1.11
ARCN1-203ENST00000392859 MED1Q15648 1581 aaPredicted RBP21.97■■□□□ 1.11
ARCN1-203ENST00000392859 TNS3Q68CZ2 1445 aa21.97■■□□□ 1.11
ARCN1-203ENST00000392859 NHSL1Q5SYE7 1610 aa21.96■■□□□ 1.11
ARCN1-203ENST00000392859 APAF1O14727 1248 aa21.96■■□□□ 1.11
ARCN1-203ENST00000392859 ZBTB7CA1YPR0 619 aa21.95■■□□□ 1.1
ARCN1-203ENST00000392859 USP19O94966 1318 aa21.95■■□□□ 1.1
ARCN1-203ENST00000392859 ROBO1Q9Y6N7 1651 aa21.95■■□□□ 1.1
ARCN1-203ENST00000392859 AMPHP49418 695 aa21.94■■□□□ 1.1
ARCN1-203ENST00000392859 EIF4A2Q14240 407 aaKnown RBP21.94■■□□□ 1.1
ARCN1-203ENST00000392859 FLT4P35916 1363 aa21.94■■□□□ 1.1
ARCN1-203ENST00000392859 SPATA31A3Q5VYP0 1347 aa21.93■■□□□ 1.1
ARCN1-203ENST00000392859 IQSEC2Q5JU85 1478 aa21.93■■□□□ 1.1
ARCN1-203ENST00000392859 PHRF1Q9P1Y6 1649 aaKnown RBP21.93■■□□□ 1.1
ARCN1-203ENST00000392859 HMOX1P09601 288 aa21.93■■□□□ 1.1
ARCN1-203ENST00000392859 GCP02774 474 aa21.92■■□□□ 1.1
ARCN1-203ENST00000392859 CABLES1Q8TDN4 633 aa21.92■■□□□ 1.1
ARCN1-203ENST00000392859 RUNDC1Q96C34 613 aa21.92■■□□□ 1.1
ARCN1-203ENST00000392859 RRP7AQ9Y3A4 280 aaKnown RBP21.92■■□□□ 1.1
ARCN1-203ENST00000392859 CRYBG1Q9Y4K1 1723 aa21.92■■□□□ 1.1
ARCN1-203ENST00000392859 HOXC9P31274 260 aa21.92■■□□□ 1.1
ARCN1-203ENST00000392859 SOS2Q07890 1332 aaPredicted RBP21.91■■□□□ 1.1
ARCN1-203ENST00000392859 RGPD1P0DJD0 1748 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms