RNA–Protein interactions for RNA: ENST00000390423.2

TRAV1-2-201, Transcript of T cell receptor alpha variable 1-2, humanhuman

APPRIS P1 BASIC

Gene TRAV1-2, Length 402 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2-201ENST00000390423 PSME1Q06323 249 aa9.61□□□□□ -0.87
TRAV1-2-201ENST00000390423 FAM196AQ6ZSG2 479 aa9.61□□□□□ -0.87
TRAV1-2-201ENST00000390423 PDGFDQ9GZP0 370 aaPredicted RBP9.61□□□□□ -0.87
TRAV1-2-201ENST00000390423 CRYBG1Q9Y4K1 1723 aa9.61□□□□□ -0.87
TRAV1-2-201ENST00000390423 CASZ1Q86V15 1759 aa9.6□□□□□ -0.87
TRAV1-2-201ENST00000390423 ALS2Q96Q42 1657 aa9.6□□□□□ -0.87
TRAV1-2-201ENST00000390423 ABCC11Q96J66 1382 aa9.6□□□□□ -0.87
TRAV1-2-201ENST00000390423 SPATA31A1Q5TZJ5 1347 aa9.59□□□□□ -0.87
TRAV1-2-201ENST00000390423 RPGRIP1LQ68CZ1 1315 aa9.59□□□□□ -0.87
TRAV1-2-201ENST00000390423 RRBP1Q9P2E9 1410 aaKnown RBP9.59□□□□□ -0.87
TRAV1-2-201ENST00000390423 NBPF8Q3BBV2 869 aa9.59□□□□□ -0.87
TRAV1-2-201ENST00000390423 NBPF14Q5TI25 921 aa9.59□□□□□ -0.87
TRAV1-2-201ENST00000390423 PMFBP1Q8TBY8 1022 aa9.59□□□□□ -0.87
TRAV1-2-201ENST00000390423 ANO8Q9HCE9 1232 aaPredicted RBP9.58□□□□□ -0.88
TRAV1-2-201ENST00000390423 USP35Q9P2H5 1018 aa9.57□□□□□ -0.88
TRAV1-2-201ENST00000390423 YTHDC2Q9H6S0 1430 aaKnown RBP9.56□□□□□ -0.88
TRAV1-2-201ENST00000390423 ZBTB7AO95365 584 aa9.56□□□□□ -0.88
TRAV1-2-201ENST00000390423 PTGER2P43116 358 aa9.56□□□□□ -0.88
TRAV1-2-201ENST00000390423 CHRNA2Q15822 529 aa9.56□□□□□ -0.88
TRAV1-2-201ENST00000390423 PRDM11Q9NQV5 511 aa9.56□□□□□ -0.88
TRAV1-2-201ENST00000390423 STRN4Q9NRL3 753 aa9.56□□□□□ -0.88
TRAV1-2-201ENST00000390423 CEP350Q5VT06 3117 aa9.56□□□□□ -0.88
TRAV1-2-201ENST00000390423 KIAA0232Q92628 1395 aa9.55□□□□□ -0.88
TRAV1-2-201ENST00000390423 SAFB2Q14151 953 aaKnown RBP eCLIP9.55□□□□□ -0.88
TRAV1-2-201ENST00000390423 CHD4Q14839 1912 aa9.54□□□□□ -0.88
TRAV1-2-201ENST00000390423 PTF1AQ7RTS3 328 aa9.54□□□□□ -0.88
TRAV1-2-201ENST00000390423 PIK3C2GO75747 1445 aa9.54□□□□□ -0.88
TRAV1-2-201ENST00000390423 PDE3BQ13370 1112 aa9.53□□□□□ -0.88
TRAV1-2-201ENST00000390423 SYT17Q9BSW7 474 aa9.53□□□□□ -0.88
TRAV1-2-201ENST00000390423 FHDC1Q9C0D6 1143 aaPredicted RBP9.53□□□□□ -0.88
TRAV1-2-201ENST00000390423 ATF5Q9Y2D1 282 aaPredicted RBP9.53□□□□□ -0.88
TRAV1-2-201ENST00000390423 PRR36Q9H6K5 1346 aa9.53□□□□□ -0.88
TRAV1-2-201ENST00000390423 ACIN1Q9UKV3 1341 aaKnown RBP9.53□□□□□ -0.88
TRAV1-2-201ENST00000390423 PHRF1Q9P1Y6 1649 aaKnown RBP9.53□□□□□ -0.88
TRAV1-2-201ENST00000390423 RGL3Q3MIN7 710 aa9.52□□□□□ -0.89
TRAV1-2-201ENST00000390423 SPATA31E1Q6ZUB1 1445 aa9.52□□□□□ -0.89
TRAV1-2-201ENST00000390423 SSH2Q76I76 1423 aa9.52□□□□□ -0.89
TRAV1-2-201ENST00000390423 ANKARQ7Z5J8 1434 aa9.52□□□□□ -0.89
TRAV1-2-201ENST00000390423 PRAM1Q96QH2 718 aa9.52□□□□□ -0.89
TRAV1-2-201ENST00000390423 PEAK1Q9H792 1746 aa9.52□□□□□ -0.89
TRAV1-2-201ENST00000390423 RGPD3A6NKT7 1758 aaPredicted RBP9.52□□□□□ -0.89
TRAV1-2-201ENST00000390423 RGPD4Q7Z3J3 1758 aa9.52□□□□□ -0.89
TRAV1-2-201ENST00000390423 GIGYF1O75420 1035 aaPredicted RBP9.51□□□□□ -0.89
TRAV1-2-201ENST00000390423 ZC3H6P61129 1189 aaKnown RBP9.51□□□□□ -0.89
TRAV1-2-201ENST00000390423 LARP1Q6PKG0 1096 aaKnown RBP9.51□□□□□ -0.89
TRAV1-2-201ENST00000390423 BARGINQ6ZT62 677 aa9.51□□□□□ -0.89
TRAV1-2-201ENST00000390423 GPRASP1Q5JY77 1395 aa9.5□□□□□ -0.89
TRAV1-2-201ENST00000390423 PAK3O75914 559 aaPredicted RBP9.5□□□□□ -0.89
TRAV1-2-201ENST00000390423 PROM2Q8N271 834 aa9.5□□□□□ -0.89
TRAV1-2-201ENST00000390423 SIRT1Q96EB6 747 aa9.5□□□□□ -0.89
TRAV1-2-201ENST00000390423 HIRIP3Q9BW71 556 aaPredicted RBP9.5□□□□□ -0.89
TRAV1-2-201ENST00000390423 PARP4Q9UKK3 1724 aaKnown RBP9.5□□□□□ -0.89
TRAV1-2-201ENST00000390423 DLC1Q96QB1 1528 aa9.5□□□□□ -0.89
TRAV1-2-201ENST00000390423 SBF2Q86WG5 1849 aa9.49□□□□□ -0.89
TRAV1-2-201ENST00000390423 SHANK3Q9BYB0 1731 aa9.49□□□□□ -0.89
TRAV1-2-201ENST00000390423 NUTM2GQ5VZR2 741 aa9.49□□□□□ -0.89
TRAV1-2-201ENST00000390423 ANKRD30BQ9BXX2 1392 aa9.49□□□□□ -0.89
TRAV1-2-201ENST00000390423 LMO7Q8WWI1 1683 aa9.48□□□□□ -0.89
TRAV1-2-201ENST00000390423 CFAP70Q5T0N1 1121 aa9.48□□□□□ -0.89
TRAV1-2-201ENST00000390423 TCP11L2Q8N4U5 519 aa9.48□□□□□ -0.89
TRAV1-2-201ENST00000390423 SGIP1Q9BQI5 828 aa9.48□□□□□ -0.89
TRAV1-2-201ENST00000390423 SLC4A1APQ9BWU0 796 aaKnown RBP9.48□□□□□ -0.89
TRAV1-2-201ENST00000390423 BCL11BQ9C0K0 894 aaPredicted RBP9.48□□□□□ -0.89
TRAV1-2-201ENST00000390423 LRRC37A3O60309 1634 aa9.48□□□□□ -0.89
TRAV1-2-201ENST00000390423 EVA1CP58658 441 aa9.47□□□□□ -0.89
TRAV1-2-201ENST00000390423 C14orf93Q9H972 538 aaKnown RBP9.47□□□□□ -0.89
TRAV1-2-201ENST00000390423 OVOS2A0A0G2JMS6 1433 aa9.47□□□□□ -0.89
TRAV1-2-201ENST00000390423 OVOS2A0A0J9YW53 1432 aa9.47□□□□□ -0.89
TRAV1-2-201ENST00000390423 OVOS2Q6IE36 1432 aa9.47□□□□□ -0.89
TRAV1-2-201ENST00000390423 TULP4Q9NRJ4 1543 aa9.46□□□□□ -0.89
TRAV1-2-201ENST00000390423 PLSCR1O15162 318 aa9.46□□□□□ -0.9
TRAV1-2-201ENST00000390423 PPARGC1BQ86YN6 1023 aaKnown RBP9.46□□□□□ -0.9
TRAV1-2-201ENST00000390423 MINK1Q8N4C8 1332 aaPredicted RBP9.46□□□□□ -0.9
TRAV1-2-201ENST00000390423 NGDNQ8NEJ9 315 aaKnown RBP9.45□□□□□ -0.9
TRAV1-2-201ENST00000390423 POGKQ9P215 609 aa9.45□□□□□ -0.9
TRAV1-2-201ENST00000390423 DHX57Q6P158 1386 aaKnown RBP9.45□□□□□ -0.9
TRAV1-2-201ENST00000390423 GOLGB1Q14789 3259 aaKnown RBP9.45□□□□□ -0.9
TRAV1-2-201ENST00000390423 ATP7BP35670 1465 aa9.45□□□□□ -0.9
TRAV1-2-201ENST00000390423 ARXQ96QS3 562 aa9.44□□□□□ -0.9
TRAV1-2-201ENST00000390423 MTFR1LQ9H019 292 aa9.44□□□□□ -0.9
TRAV1-2-201ENST00000390423 COL5A2P05997 1499 aaPredicted RBP9.44□□□□□ -0.9
TRAV1-2-201ENST00000390423 ADGRB1O14514 1584 aa9.43□□□□□ -0.9
TRAV1-2-201ENST00000390423 SLC15A2Q16348 729 aa9.43□□□□□ -0.9
TRAV1-2-201ENST00000390423 GPR162Q16538 588 aa9.43□□□□□ -0.9
TRAV1-2-201ENST00000390423 STK32BQ9NY57 414 aa9.43□□□□□ -0.9
TRAV1-2-201ENST00000390423 MAP3K5Q99683 1374 aa9.42□□□□□ -0.9
TRAV1-2-201ENST00000390423 TXNRD1Q16881 649 aa9.42□□□□□ -0.9
TRAV1-2-201ENST00000390423 PELP1Q8IZL8 1130 aaKnown RBP9.42□□□□□ -0.9
TRAV1-2-201ENST00000390423 CPDO75976 1380 aa9.41□□□□□ -0.9
TRAV1-2-201ENST00000390423 WNK3Q9BYP7 1800 aa9.41□□□□□ -0.9
TRAV1-2-201ENST00000390423 WASLO00401 505 aaPredicted RBP9.41□□□□□ -0.9
TRAV1-2-201ENST00000390423 MARCH10Q8NA82 808 aaPredicted RBP9.41□□□□□ -0.9
TRAV1-2-201ENST00000390423 TRAK1Q9UPV9 953 aa9.41□□□□□ -0.9
TRAV1-2-201ENST00000390423 THRAP3Q9Y2W1 955 aaKnown RBP9.41□□□□□ -0.9
TRAV1-2-201ENST00000390423 PAPPAQ13219 1627 aa9.41□□□□□ -0.9
TRAV1-2-201ENST00000390423 CRB1P82279 1406 aa9.4□□□□□ -0.9
TRAV1-2-201ENST00000390423 EIF3AQ14152 1382 aaKnown RBP9.4□□□□□ -0.9
TRAV1-2-201ENST00000390423 ITSN1Q15811 1721 aa9.4□□□□□ -0.9
TRAV1-2-201ENST00000390423 KLHL34Q8N239 644 aa9.4□□□□□ -0.9
TRAV1-2-201ENST00000390423 AKAP12Q02952 1782 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms