RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 ATRNO75882 1429 aa12.71□□□□□ -0.37
TRBV27-201ENST00000390399 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.71□□□□□ -0.37
TRBV27-201ENST00000390399 CRYBG1Q9Y4K1 1723 aa12.71□□□□□ -0.37
TRBV27-201ENST00000390399 PLCH1Q4KWH8 1693 aa12.71□□□□□ -0.37
TRBV27-201ENST00000390399 CLSPNQ9HAW4 1339 aa12.71□□□□□ -0.37
TRBV27-201ENST00000390399 RBM6P78332 1123 aaKnown RBP12.71□□□□□ -0.37
TRBV27-201ENST00000390399 TRPC5Q9UL62 973 aaPredicted RBP12.71□□□□□ -0.37
TRBV27-201ENST00000390399 BCL9LQ86UU0 1499 aa12.71□□□□□ -0.38
TRBV27-201ENST00000390399 SBNO2Q9Y2G9 1366 aa12.7□□□□□ -0.38
TRBV27-201ENST00000390399 SLIT2O94813 1529 aa12.7□□□□□ -0.38
TRBV27-201ENST00000390399 RGS12O14924 1447 aa12.7□□□□□ -0.38
TRBV27-201ENST00000390399 NWD2Q9ULI1 1742 aa12.69□□□□□ -0.38
TRBV27-201ENST00000390399 PHRF1Q9P1Y6 1649 aaKnown RBP12.69□□□□□ -0.38
TRBV27-201ENST00000390399 ATAD2Q6PL18 1390 aa12.69□□□□□ -0.38
TRBV27-201ENST00000390399 CABP1Q9NZU7 370 aa12.68□□□□□ -0.38
TRBV27-201ENST00000390399 COL14A1Q05707 1796 aaKnown RBP12.67□□□□□ -0.38
TRBV27-201ENST00000390399 UNC5CLQ8IV45 518 aa12.67□□□□□ -0.38
TRBV27-201ENST00000390399 USP6P35125 1406 aa12.67□□□□□ -0.38
TRBV27-201ENST00000390399 NUTM2GQ5VZR2 741 aa12.66□□□□□ -0.38
TRBV27-201ENST00000390399 TIMELESSQ9UNS1 1208 aa12.66□□□□□ -0.38
TRBV27-201ENST00000390399 BRD4O60885 1362 aaPredicted RBP12.66□□□□□ -0.38
TRBV27-201ENST00000390399 AKAP12Q02952 1782 aa12.66□□□□□ -0.38
TRBV27-201ENST00000390399 NRAPQ86VF7 1730 aa12.65□□□□□ -0.38
TRBV27-201ENST00000390399 NRKQ7Z2Y5 1582 aa12.65□□□□□ -0.38
TRBV27-201ENST00000390399 FAM83GA6ND36 823 aa12.65□□□□□ -0.38
TRBV27-201ENST00000390399 ABTB2Q8N961 1025 aa12.65□□□□□ -0.38
TRBV27-201ENST00000390399 CCER1Q8TC90 406 aaPredicted RBP12.65□□□□□ -0.38
TRBV27-201ENST00000390399 GJD4Q96KN9 370 aaPredicted RBP12.64□□□□□ -0.39
TRBV27-201ENST00000390399 GLI3P10071 1580 aa12.64□□□□□ -0.39
TRBV27-201ENST00000390399 PRDM11Q9NQV5 511 aa12.63□□□□□ -0.39
TRBV27-201ENST00000390399 KIAA0232Q92628 1395 aa12.63□□□□□ -0.39
TRBV27-201ENST00000390399 USP47Q96K76 1375 aa12.63□□□□□ -0.39
TRBV27-201ENST00000390399 PIK3C2AO00443 1686 aa12.63□□□□□ -0.39
TRBV27-201ENST00000390399 USP19O94966 1318 aa12.62□□□□□ -0.39
TRBV27-201ENST00000390399 SSH2Q76I76 1423 aa12.62□□□□□ -0.39
TRBV27-201ENST00000390399 ST20-MTHFSA0A0A6YYL1 179 aa12.62□□□□□ -0.39
TRBV27-201ENST00000390399 VPS72Q15906 364 aa12.62□□□□□ -0.39
TRBV27-201ENST00000390399 NLRP13Q86W25 1043 aa12.62□□□□□ -0.39
TRBV27-201ENST00000390399 BTG4Q9NY30 223 aa12.62□□□□□ -0.39
TRBV27-201ENST00000390399 CCDC9Q9Y3X0 531 aaKnown RBP12.62□□□□□ -0.39
TRBV27-201ENST00000390399 MON2Q7Z3U7 1717 aa12.62□□□□□ -0.39
TRBV27-201ENST00000390399 CPSF1Q10570 1443 aaKnown RBP12.62□□□□□ -0.39
TRBV27-201ENST00000390399 KTN1Q86UP2 1357 aaKnown RBP12.61□□□□□ -0.39
TRBV27-201ENST00000390399 TESK2Q96S53 571 aa12.61□□□□□ -0.39
TRBV27-201ENST00000390399 ZNF692Q9BU19 519 aaPredicted RBP12.61□□□□□ -0.39
TRBV27-201ENST00000390399 ZC3H6P61129 1189 aaKnown RBP12.6□□□□□ -0.39
TRBV27-201ENST00000390399 CHRNA2Q15822 529 aa12.6□□□□□ -0.39
TRBV27-201ENST00000390399 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
TRBV27-201ENST00000390399 SLIT3O75094 1523 aa12.6□□□□□ -0.39
TRBV27-201ENST00000390399 TTC21BQ7Z4L5 1316 aa12.6□□□□□ -0.39
TRBV27-201ENST00000390399 CD163L1Q9NR16 1453 aa12.59□□□□□ -0.39
TRBV27-201ENST00000390399 CPDO75976 1380 aa12.59□□□□□ -0.39
TRBV27-201ENST00000390399 SLC24A1O60721 1099 aa12.59□□□□□ -0.39
TRBV27-201ENST00000390399 NLRP6P59044 892 aa12.59□□□□□ -0.39
TRBV27-201ENST00000390399 PUS7Q96PZ0 661 aaKnown RBP12.59□□□□□ -0.39
TRBV27-201ENST00000390399 TTC21AQ8NDW8 1320 aa12.59□□□□□ -0.39
TRBV27-201ENST00000390399 GCP02774 474 aa12.58□□□□□ -0.4
TRBV27-201ENST00000390399 HDGFL2Q7Z4V5 671 aaPredicted RBP12.58□□□□□ -0.4
TRBV27-201ENST00000390399 UPF1Q92900 1129 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRBV27-201ENST00000390399 LMO7Q8WWI1 1683 aa12.57□□□□□ -0.4
TRBV27-201ENST00000390399 NINLQ9Y2I6 1382 aa12.57□□□□□ -0.4
TRBV27-201ENST00000390399 SLC12A5Q9H2X9 1139 aa12.57□□□□□ -0.4
TRBV27-201ENST00000390399 A0A1W2PP64 1363 aa12.56□□□□□ -0.4
TRBV27-201ENST00000390399 TMF1P82094 1093 aa12.56□□□□□ -0.4
TRBV27-201ENST00000390399 STRN4Q9NRL3 753 aa12.56□□□□□ -0.4
TRBV27-201ENST00000390399 TERF2IPQ9NYB0 399 aa12.56□□□□□ -0.4
TRBV27-201ENST00000390399 EDC4Q6P2E9 1401 aaKnown RBP12.55□□□□□ -0.4
TRBV27-201ENST00000390399 CAMTA1Q9Y6Y1 1673 aa12.55□□□□□ -0.4
TRBV27-201ENST00000390399 A0A0G2JS52 829 aa12.55□□□□□ -0.4
TRBV27-201ENST00000390399 ZBTB7CA1YPR0 619 aa12.55□□□□□ -0.4
TRBV27-201ENST00000390399 MYT1Q01538 1121 aa12.55□□□□□ -0.4
TRBV27-201ENST00000390399 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRBV27-201ENST00000390399 SEPT12Q8IYM1 358 aa12.55□□□□□ -0.4
TRBV27-201ENST00000390399 SPATA31A5Q5VU36 1347 aa12.55□□□□□ -0.4
TRBV27-201ENST00000390399 SPATA31A7Q8IWB4 1347 aa12.55□□□□□ -0.4
TRBV27-201ENST00000390399 BRWD3Q6RI45 1802 aa12.55□□□□□ -0.4
TRBV27-201ENST00000390399 USP54Q70EL1 1684 aa12.54□□□□□ -0.4
TRBV27-201ENST00000390399 FAM98CQ17RN3 349 aaKnown RBP12.54□□□□□ -0.4
TRBV27-201ENST00000390399 NFAT5O94916 1531 aa12.53□□□□□ -0.4
TRBV27-201ENST00000390399 SOX12O15370 315 aa12.53□□□□□ -0.4
TRBV27-201ENST00000390399 ONECUT3O60422 494 aaPredicted RBP12.53□□□□□ -0.4
TRBV27-201ENST00000390399 EVA1CP58658 441 aa12.53□□□□□ -0.4
TRBV27-201ENST00000390399 KCNH5Q8NCM2 988 aa12.53□□□□□ -0.4
TRBV27-201ENST00000390399 THSD7AQ9UPZ6 1657 aa12.53□□□□□ -0.4
TRBV27-201ENST00000390399 AATKQ6ZMQ8 1374 aa12.53□□□□□ -0.4
TRBV27-201ENST00000390399 USP31Q70CQ4 1352 aa12.53□□□□□ -0.4
TRBV27-201ENST00000390399 COL5A2P05997 1499 aaPredicted RBP12.53□□□□□ -0.4
TRBV27-201ENST00000390399 CDCA8Q53HL2 280 aa12.52□□□□□ -0.41
TRBV27-201ENST00000390399 NME9Q86XW9 330 aa12.52□□□□□ -0.41
TRBV27-201ENST00000390399 SPATA31A1Q5TZJ5 1347 aa12.52□□□□□ -0.41
TRBV27-201ENST00000390399 ANKRD36BQ8N2N9 1353 aa12.52□□□□□ -0.41
TRBV27-201ENST00000390399 COL18A1P39060 1754 aa12.51□□□□□ -0.41
TRBV27-201ENST00000390399 ZRANB1Q9UGI0 708 aa12.51□□□□□ -0.41
TRBV27-201ENST00000390399 LARP1Q6PKG0 1096 aaKnown RBP12.5□□□□□ -0.41
TRBV27-201ENST00000390399 KRT27Q7Z3Y8 459 aa12.5□□□□□ -0.41
TRBV27-201ENST00000390399 USP35Q9P2H5 1018 aa12.5□□□□□ -0.41
TRBV27-201ENST00000390399 ABCC6O95255 1503 aa12.5□□□□□ -0.41
TRBV27-201ENST00000390399 MYOM1P52179 1685 aa12.5□□□□□ -0.41
TRBV27-201ENST00000390399 OVOS2A0A0J9YW53 1432 aa12.49□□□□□ -0.41
TRBV27-201ENST00000390399 OVOS2Q6IE36 1432 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms